Agri006929.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Achroia grisella
Gene Symbol
nfxl1
Assembly
GCA_030625045.1
Location
JAULSB010000124.1:582519-584999[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.026 7.5e+02 1.0 0.2 4 10 169 175 168 176 0.96
3 17 1.6e-07 0.0045 17.6 15.9 3 19 186 202 185 202 0.95
4 17 9e-07 0.026 15.2 12.4 1 19 237 255 237 255 0.93
5 17 1 2.9e+04 -4.1 1.7 6 10 280 284 279 284 0.87
6 17 1e-09 2.9e-05 24.6 13.0 1 19 290 308 290 308 0.99
7 17 8.1e-07 0.023 15.4 18.3 3 19 345 361 344 361 0.93
8 17 2.4e-07 0.0069 17.0 16.3 1 18 395 412 395 413 0.97
9 17 4.5e-09 0.00013 22.5 15.9 1 19 422 440 422 440 0.99
10 17 5e-05 1.4 9.6 5.1 10 19 489 498 486 498 0.90
11 17 0.0053 1.5e+02 3.2 7.5 3 11 509 517 508 518 0.86
12 17 0.17 5e+03 -1.7 3.6 14 18 547 551 547 552 0.87
13 17 0.076 2.2e+03 -0.5 0.4 7 12 567 572 567 572 0.84
14 17 5.8e-06 0.17 12.6 3.6 1 11 588 598 588 599 0.97
15 17 1 2.9e+04 -7.7 4.9 6 10 616 620 613 620 0.71
16 17 2.7e-05 0.77 10.5 14.2 4 18 630 645 628 646 0.85
17 17 6.4e-06 0.18 12.5 10.3 1 16 687 701 687 707 0.92

Sequence Information

Coding Sequence
ATGGCGCGTAGGTACCGTGACGCAGCTGCAAAATTGCAACAAAATGTCCAGAAACACTTGAAAGAAATGAAGGATCTTTCTTCCTCTGAAGATGAGGAGCCCTTTGAATCAAGTGTACTGGAAGGAGTATTCCAAACATATTGGAGAGGAGGTGGCGACTCACAATTGCTGAACCGCACCAAGAATATGCTGGAAGAAGCGATCAGCGGTCGACCGGTCACTTGTCTTATTTGTATTGGTTCTATCAAGCGAGCTGATGCCATCTGGGCATGTGAAGACTGTCACTGCTATTTTCACTTACTCTGTATTCAAAAATGGTCAAACGATAGTATAAGTTTAAGAAGCGAGGAAACCCACGGTCCTATTTCTGTATTTGTTCCCAAAAAAGTTGAGTGGTGTTGTCCGAAATGTCGACACTCGTACAGCAAAGAAGAAATACCGCGAAAATACAGATGTTTTTGTGGCAACACTGACAATCCACCGCAACATGCTTGGTTGATTCCACATTCATGTGGAGAAGTTTGTGGCAAACGATTATCATTGGGTGAAAACTGCAAgcataaatgtttgttactctgccACCCTGGACCCTGCCCGCCGTGTCCACAGACTGTTAACGGAGCATGTTACTGTGAGAAGGAACGTAAGAGAGTCAGGTGTAGTGCAGCAAAATGGTCCTGTAGTCAACGGTGCAATAGATCACTGCTTTGTAATTCGCACAAGTGTGAAAATATCTGTCATGAAAATGAATGCCCCCCATGTAGTTACACAAGTGAGCAGGCATGCCAGTGTGGCCGGGAAAAGACAAAAAGACCATGCAACAGTCCATTTTGGCAGTGCAAACGGACCTGCAGTAAGCCTTTCTCATGCGGTTACCATAAGTGTGACAAGGTATGCCATTCAGGCTCATGCGGTACATGCCCCTATTCCGGTTTACGTTCCTGTCCCTGTGGAGCTGACCAGCGATATGTACAATGTCCAGATATAATGGAAACCTGTTTAGGCACATGTAACAAGAAACATGCGGACTGTGAACACAGTTGCCCTGAAAAGTGCCATAAAGGTCCTTGCCCACCATGCCAAGTGTTGATACAGAAGAAATGCCAATGCAGTGCACACACTCGATCATTACCTTGTAGCAAAGACTATAAGTGTGATACAAAATGCCGTGGCACCAGGCCCTGTGGCAAACACGCCTGTGCAAGAAAATGTTGCAATGGAAACTGCCCCCCATGTGAAAAAGTATGTGACAAACCATTACAGTGTGGCCGACACAAATGCACTATGGTCTGCCACCATGGGCCTTGTTACCCATGTCCAAGAGAATCGAAAATAACCTGCAGATGCAAGGAAACATATGTCACAGTTCCATGTGGCAGGGAAAAGCATATAAAACCACCGAAATGTCATTTACCCtgcaaatttaaatacaaatgtggACATATTGATGAGAACAAACACTTTTGCCACTTTGGAGACTGTCCTCCCTGTAAAGCAATATGTTATAAATCTTATCCTAACTGCACACATAAGTGCAAAGCAACATGCCATGCATTTGTGGCTGTTGTGTTCAAACAAGTGGAGAAACCTGCTACACCTTGGGAAATAGAGCCACCAAAGACCAAAATTCTTAACCTAGACTGTCCCCCCTGTGATACACCTGTCCCTGTCATATGCTTTGGTGAACATGAGACAGAAGAACAGCCTTGTCATTCTGCTAAACGTCGATGTTGCGGCCGTGAATGTAAAAAGCCATTGTCTTGTGGTAATCACTCTTGTGCATTACTCTGTCATTTATACTCTACCAATTCGGAGTATCCAAATGTGCCTTATAATTGTAAGCAATGTGAACAAGAATGTATCATGAACCGTCCAAAGAAGTGCACACACAAGTGTGCTATTCGTCGATGCCATCCAGGACCTTGTCCTCCTTGTGATGTATTAGAAAGAGTTCCTTGCAATTGTGGATTGACTGAACTATACTTACGTTGCCGAGAGCTGTCCGTTGCAACTGATGAGACATTATCTTGTAACCAGCAGTGCCCCAAGAACTTGGAATGTGGACATCGCTGTCGCAATACCTGTCATGTTGGTAAATGTTCACAAGCACAGATTTGCACCAAGAAAACCAAGGTGCACTGTTCTTGTGGGAATTTAAGGAAGGAATTCCCTTGTAACATTGTGAAGAATGGAGAAGCGAAAGTTCAGTGTGACAAATCCTGTGAAGAGAAAAAGAGAGTTATAAAACTAGAAGCAGAGAAAGAAGCACGAAGACTGAAAGAGTTGGAAGAAGAACGAAATCGCAAGGAACTAGCTGAGTATGAGTGGAAATTGAGTGGTAAGAAGAAGAAATATAAGGAAAAGAAAATTGTTGCTACCAAAGATGATAGAAATTGGTTACAAAAGTACTGGATTCCTATTTTATCACTCTTAATTGGGATAGTGTCTATAACttattgcattttatatatagatatatag
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFESSVLEGVFQTYWRGGGDSQLLNRTKNMLEEAISGRPVTCLICIGSIKRADAIWACEDCHCYFHLLCIQKWSNDSISLRSEETHGPISVFVPKKVEWCCPKCRHSYSKEEIPRKYRCFCGNTDNPPQHAWLIPHSCGEVCGKRLSLGENCKHKCLLLCHPGPCPPCPQTVNGACYCEKERKRVRCSAAKWSCSQRCNRSLLCNSHKCENICHENECPPCSYTSEQACQCGREKTKRPCNSPFWQCKRTCSKPFSCGYHKCDKVCHSGSCGTCPYSGLRSCPCGADQRYVQCPDIMETCLGTCNKKHADCEHSCPEKCHKGPCPPCQVLIQKKCQCSAHTRSLPCSKDYKCDTKCRGTRPCGKHACARKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHHGPCYPCPRESKITCRCKETYVTVPCGREKHIKPPKCHLPCKFKYKCGHIDENKHFCHFGDCPPCKAICYKSYPNCTHKCKATCHAFVAVVFKQVEKPATPWEIEPPKTKILNLDCPPCDTPVPVICFGEHETEEQPCHSAKRRCCGRECKKPLSCGNHSCALLCHLYSTNSEYPNVPYNCKQCEQECIMNRPKKCTHKCAIRRCHPGPCPPCDVLERVPCNCGLTELYLRCRELSVATDETLSCNQQCPKNLECGHRCRNTCHVGKCSQAQICTKKTKVHCSCGNLRKEFPCNIVKNGEAKVQCDKSCEEKKRVIKLEAEKEARRLKELEEERNRKELAEYEWKLSGKKKKYKEKKIVATKDDRNWLQKYWIPILSLLIGIVSITYCILYIDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00737154;
90% Identity
iTF_00737154;
80% Identity
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