Basic Information

Insect: Achroia grisella
Gene Symbol: PAXBP1
Assembly: GCA_030625045.1
Location: JAULSB010000467.1:7455341-7467965[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0034 32 4.6 0.0 4 40 268 304 265 307 0.86

2 10 0.0069 66 3.6 0.1 12 40 301 329 300 332 0.87

3 10 0.0058 55 3.9 0.1 12 40 326 354 323 357 0.88

4 10 0.006 58 3.8 0.1 12 40 351 379 349 382 0.88

5 10 0.006 58 3.8 0.1 12 40 376 404 374 407 0.88

6 10 0.0061 58 3.8 0.1 12 40 401 429 399 432 0.88

7 10 0.0068 65 3.6 0.1 12 40 426 454 425 458 0.87

8 10 0.006 58 3.8 0.1 12 40 451 479 449 482 0.88

9 10 0.0061 58 3.8 0.1 12 40 476 504 474 507 0.88

10 10 1.9e-12 1.8e-08 35.0 1.5 12 147 526 642 523 657 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0034	32	4.6	0.0	4	40	268	304	265	307	0.86
2	10	0.0069	66	3.6	0.1	12	40	301	329	300	332	0.87
3	10	0.0058	55	3.9	0.1	12	40	326	354	323	357	0.88
4	10	0.006	58	3.8	0.1	12	40	351	379	349	382	0.88
5	10	0.006	58	3.8	0.1	12	40	376	404	374	407	0.88
6	10	0.0061	58	3.8	0.1	12	40	401	429	399	432	0.88
7	10	0.0068	65	3.6	0.1	12	40	426	454	425	458	0.87
8	10	0.006	58	3.8	0.1	12	40	451	479	449	482	0.88
9	10	0.0061	58	3.8	0.1	12	40	476	504	474	507	0.88
10	10	1.9e-12	1.8e-08	35.0	1.5	12	147	526	642	523	657	0.83

Sequence Information

Coding Sequence: ATGTTTCCATTTGACTGGGTCAGTGTTTttatgataactatgactgcaAGCACAGCGAGATGCGAGCGCGACCGAGAGATCCTTATCGATCCTCACTCATCTCGAGCCCGGCGCACGTCGACCATTAATCTAACGGGGCCCAATGACGATAGATCGTGCCGAACATGTCACGTTCTCCGATCGTTATCAGGGCGAGCTCATCGTTATTGCGGTCGCAGGCTGGAGGAGCTGCAGATGGACCGGGACGAGACGCGCGCGCGCCGCGACGAGGTGGTGCGGCGGCTGCAGGCGGCGGCCGCGGCGCGCCGCACGCGGGCCGCGCGCCGCGCCGGGCTCGACGCCGCCTACCGCCGCGCGCAGGCCGCCCGCGGCTACCTCACTGACCTCGTCGAGTGTCTCGACGAGAAGATGCCGGCGCTGCAGGCGCTGGAGGCACGCGCGTTAGCGCTGCATCGGCGGCGCTGCGAGTTCCTGCAGGAGAGGCGCCGCGCTGACGTCCGCGACCAGGCGCAGGACGCGCTCGCGCTTGCCGcaCGGCCCGGCGCCGCGAAGCCCGTGGATTCAGAGGAGAAGATACGTCGCGCGGCCGAGCGAGAGGGCAGGAGGAGAGCGAGACGGCTGcagcgcgcggcggcggcggccgcggccggcGCCACCCCGCGACACCGCGACGGAGACTCCAGCGACGACGACCTCCCGCCCGCAGAGCACCAGCACTACCAGCAGGAGAGAGAGACGATCAAGCAGATGTCGTCGTCGCTGTTTGCGGACGCGCTGCCGGCGTGGCGCAGCGTGGCCGGCGTCTGCGCACGTCTCGCACGCTTCCGGCGACGCTCACGAGCACTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTTTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTGCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCGCACTCCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGGTGAGCGCGCTCTACTGCGACGCGTACGTCGCACACTCCCTGCCGCAGCTGCTCGCGCCGTACGTGCGCCACCAGCTTATATTATGGAATCCGTTAGCTGACGAAGATAATGAGGACTACGAGAAAATGGACTGGTACAAATGTCTGATGATGTACGGAGTCCGGGCCGAGCGGCTGTCTAGTGAGTCTGAGCAGTCGGATGATGAGGAGGAAGCAGAGGATGTTACGGTTACAGAGACCTCGGTGCGGGAAGATCCTGACCTGTACCTAGTGCCGACCATCATCAACAAACTCGTACTGCCTAAGCTTACAGAGCTGGTGGAGCAGGCGTGGGACCCGATGTGTGTGCGCGCGTGCGTCCGGCTGCGGCACCTCGTACTGCGCGCCGCCGGcctgccgccgccgcccgccgccggacCGGACCCCGCGCCCGGCTCCGGCCCCGGCTCCGGCCCCGGCCCCGGCTCCGGCCCGGACACCGCCGCGCCGGCGCCTCCGTTACGACGGCTAGCGCTCGCCGTGCGCGCGCGGCTCGCAGCCACGATCAACGCAGATGTCTTCTTACCCACGCTGCCTCCACAAGCGATGGAGGGTGCGGGCGGTCTGTTCTGGCGGCGGTGTGCTGGCGGCGCCGTGCGGCTGCTGCGCGGGACGCTGGCGctcgccgcgccgcccgccctgCTGCGTGCCGACGCGCTCGTGCTCGCCCTGCTCGAGACGGTGTGctgcgcggcgggcgcggctgctgcgggcgggggcgcgggcgcgggggcggtggcggcggcgggggcggcggccgCGCTGGCTGCGTCGCTGCCACGTGCCGGCCAGCTGCGAGCACGTGCGCTGCCGCGACTGGCCGCGCTCGCACAACACGTGCTGCAATACCTGCACTCGGACAATCCCATGCACCTaaaagCACTGGAACAGGCCAGAAGTTTAATAGCAGAAGCTCGCGCGTTAGAATGA
Protein Sequence: MFPFDWVSVFMITMTASTARCERDREILIDPHSSRARRTSTINLTGPNDDRSCRTCHVLRSLSGRAHRYCGRRLEELQMDRDETRARRDEVVRRLQAAAAARRTRAARRAGLDAAYRRAQAARGYLTDLVECLDEKMPALQALEARALALHRRRCEFLQERRRADVRDQAQDALALAARPGAAKPVDSEEKIRRAAEREGRRRARRLQRAAAAAAAGATPRHRDGDSSDDDLPPAEHQHYQQERETIKQMSSSLFADALPAWRSVAGVCARLARFRRRSRALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHCLPQLLAPYVRHQVSALYCDAYVAHSLPQLLAPYVRHQVSALYCDAYVAHSLPQLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRAERLSSESEQSDDEEEAEDVTVTETSVREDPDLYLVPTIINKLVLPKLTELVEQAWDPMCVRACVRLRHLVLRAAGLPPPPAAGPDPAPGSGPGSGPGPGSGPDTAAPAPPLRRLALAVRARLAATINADVFLPTLPPQAMEGAGGLFWRRCAGGAVRLLRGTLALAAPPALLRADALVLALLETVCCAAGAAAAGGGAGAGAVAAAGAAAALAASLPRAGQLRARALPRLAALAQHVLQYLHSDNPMHLKALEQARSLIAEARALE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -