Afla016750.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Achlya flavicornis
Gene Symbol
-
Assembly
GCA_947623365.1
Location
OX392479.1:5399372-5417979[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 8.7e-05 0.0056 17.4 2.2 1 23 424 446 424 446 0.97
2 20 0.0045 0.29 12.0 0.6 1 20 452 471 452 474 0.94
3 20 7e-06 0.00045 20.8 5.6 1 23 493 515 493 515 0.98
4 20 0.00011 0.0067 17.2 4.1 1 23 521 543 521 543 0.99
5 20 4e-05 0.0026 18.5 5.3 1 23 549 571 549 571 0.97
6 20 1.2e-05 0.00079 20.1 7.3 1 23 577 599 577 599 0.97
7 20 8.1e-07 5.2e-05 23.8 2.9 1 23 605 627 605 627 0.97
8 20 0.00011 0.007 17.1 6.7 1 23 633 655 633 655 0.97
9 20 0.00011 0.007 17.1 6.5 1 23 661 683 661 683 0.97
10 20 5.3e-07 3.4e-05 24.4 1.9 1 23 689 711 689 711 0.98
11 20 5.4e-05 0.0034 18.1 7.9 1 23 717 739 717 739 0.98
12 20 9e-06 0.00058 20.5 6.4 1 23 745 767 745 767 0.98
13 20 4.8e-06 0.00031 21.4 5.2 1 23 773 795 773 795 0.98
14 20 1.1e-05 0.0007 20.2 5.2 1 23 801 823 801 823 0.96
15 20 3.5e-06 0.00023 21.8 6.9 1 23 829 851 829 851 0.98
16 20 3.3e-06 0.00021 21.9 6.0 1 23 857 879 857 879 0.98
17 20 1.2e-05 0.00076 20.1 7.6 1 23 885 907 885 907 0.97
18 20 3.9e-06 0.00025 21.7 5.4 1 23 913 935 913 935 0.98
19 20 0.00059 0.038 14.8 0.3 1 23 942 964 942 964 0.96
20 20 0.33 21 6.1 5.0 1 23 973 995 973 995 0.98

Sequence Information

Coding Sequence
ATGAATCCGGAGCATCACAATATGAATACGGGTGGTGGCCAGCCCCCTGGAAGTTCAGAGTCACAGAACCAGAGAGTGCAATCAGGGCAGCAACAGCAGAATAATTTACCACCCACTACATCTGCTACGGACTTGCGTGTGAACTCAGCCGCTGTGAATGTCGCTTTGTCTAGCGTCGCCAAATATTGGGTGTTTACAAATTTATTCCCTGGACCTATACCCCAAGTTTCCGTTTATGGATTACCGACAGGTGCAAGGATTGAAAATGGAAAACCTGTACAGGATCTTGGTCAAGCTCATGCAAGCATACTGAATGGTGACCCAAACATAATACTTGGACATCATGGAGGACAGCCACAGGTCACTGTTTCAGCTGGAGCTCAGCAGATACCTGTCTCTCAAATCATTGCCACACAATCTGGTCAGACACATGAAGGGCTGGTTGCACACAGCCAGCAGGAGCTCGGGCAGCAGTCTTCAGGAGCACAGGTGTCGGTGAGCTCAGGCCAGCCCACCCATCACCAGGTACCCAATAATCGGGTCGAATTTGTACAACACCATAACATTGATATGGTAAATCATGTGGGTCATCACTCACAGCAACATATAATGCAACAACAGTTGATGGCAGCGGCTCGACCTGATCACGGAAATCAACAGATACAACTGACAGTGAGTGAAGATGGCATCGTCACAGTGGTGGAGCCGGGCGGCGGCGGCGGCAAGCTCCTCGATAAAGAAGAAATGCACGACTCCATCAAGATGCCCACAGATCACACACTTACTGTGCATCAATTACAACAGATTGTGGGCCAACAGGTAATCGACAGTGTAGTGCGCATAGAGCAAGCCACGGGCGAGCCGGCGAACATTCTAGTGACACACAACCCAGATGGCACCACTTCCATCGAAGCAAGCGCAGGGGACCCGCTCATAGTCAAGGACGAGAAGAACTCTAGTAAAATGGAAACTGCTCAGTTTGCCATACCAACAGATATAAAGGATATGAAAGGGATTGATTTGAAGAGTGTTGGAGCCATGGGCATGGAAGGAGCTGTAGTGAAGATATCGGCTGGTACGTCAGACCACGACCTCCATGCCATGTATAAAGTTAATGTGGAGGATCTCTCACAATTACTGGCTTATCATGAAGTTTTTGGTAAACTTAACTCGGAAGGTCAACAACCACAAGCCAAGGTGATAGAAGTGGAAGTAGAAGCAGCAGGGACCAGTGCTGGTATGTCGGAAGCGGAATCTTCGCCCGGTCATCACTCTTGTGATATTTGCGGAAAGATATTCCAATTCCGGTATCAACTTATTGTTCACAGACGTTACCATGGCGAGAGTAAACCTTTCACGTGTCAAGTTTGCGGCTCGGCGTTTGCCAATCCAGTTGAGCTGTCTAGACATGGGAAATGTCATCTTGCTGGTGATCCAGCGGAACGGCACGCCAAGAGGTTGGCGCAAGACAAACCATACGCATGCACCACTTGCCATAAAACGTTCTCCCGCAAGGAACACTTGGACAACCATATTCGCAGTCACACTGGAGAAACGCCATACAGATGTGAATTCTGCGCCAAGACGTTTACACGTAAAGAGCACATGGTGAATCACGTGCGGAAACACACCGGCGAGACGCCGCATCGCTGCGACATTTGCAAGAAGAGCTTCACCAGAAAAGAGCATTTCATGAACCATGTTATGTGGCACACAGGTGAAACACCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCGCACACAAGCGATACTCCGTTCCGATGCGATCTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATATTATGGCATACGGGTGAAACTCCCCATCGTTGCGATTTCTGCTCGAAGACTTTCACACGTAAGGAGCACTTGCTTAACCACGTGCGTCAACACACGGGGGAGTCCCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTTACGCGGAGGGAGCATCTCGTCAACCACGTCCGCCAACACACTGGCGAGACGCCCTTTCAGTGTGGATACTGCCCTAAGGCGTTCACAAGAAAGGACCATCTCGTGAACCACGTCCGGCAACACACGGGTGAATCTCCTCACAAGTGTTCTTTCTGCACGAAGTCGTTCACTCGCAAGGAACACCTCACGAACCACGTGCGGCAACACACGGGCGAGTCTCCGCACCGGTGTAGTTACTGCGCCAAGTCGTTCACGAGGAAGGAACATCTTACTAATCATATCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGCCAGCACACGGGCGCCGCGCCGCACGCCTGCTCCTACTGCAACAAGACCTTCACACGGAAGGAGCACCTCGTCAACCATGTCAGGCAACATACGGGCGAGACGCCATTCAAATGCACGTACTGCTCGAAATCGTTCTCCCGGAAGGAACACCTCACGAATCACATACACATCCACACGGGTGAGACTCCTCACAAGTGTCCGTTCTGCACTAAAACATTCTCTCGGAAGGAGCATTTGACCAATCATGTCAGAATCCATACGGGTGAATCTCCGCACCGTTGTGAATATTGCCAGAAGACATTCACGCGTAAGGAACACCTCACGAACCACCTGAAACAGCACACGGGTGACACGGCGCATACTTGCAAAGTATGCACCAAACCATTTACTAGGAAAGAGCATCTTGTTACGCACATGCGATCGCATAGTTGCGGCGAGCGGCCATACAGTTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGGAACCTGCTGTTCCACGAGCGATCTCACAACAAGGGCGCCGGCGCACGCCCCTACCGATGCGATATCTGCTCCAAGGACTTTTTGTGTAAAGGGCATCTAGTGTCACATAGGCGCACGCATAACGAGGCGGGCGAAGGCACCGCTAATACTGAGACTCCGGCCGAGACGACTGAGGAATGCAGTGATTGTAACAAGTGTATCAAAACTGAAGTTGAAAGACCGGAGAGGAAACATGACATCAGGGCCACTGCAGAAAATAGGCCGGCTGAAGTCAATGTCGCACAAACCAATACACAACCCAACACTACTGTGATGCAAATTACAAGCCAACAAGTCCGTCCGGGCACGGTGACGAGCGCGAGTGGCGTGACGACGGGCACGTTCACGCACACCAACCCGCAGCACCTCAACACCGCCGCCGGACCCGCCGGCCCCGGACCCGCACCCGGACCCGGACCCGGACCCGGACCCGCCCTCGCGCACCATCCCCTCACTGTCAACTACTAG
Protein Sequence
MNPEHHNMNTGGGQPPGSSESQNQRVQSGQQQQNNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASILNGDPNIILGHHGGQPQVTVSAGAQQIPVSQIIATQSGQTHEGLVAHSQQELGQQSSGAQVSVSSGQPTHHQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMAAARPDHGNQQIQLTVSEDGIVTVVEPGGGGGKLLDKEEMHDSIKMPTDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLIVKDEKNSSKMETAQFAIPTDIKDMKGIDLKSVGAMGMEGAVVKISAGTSDHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQPQAKVIEVEVEAAGTSAGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRLAQDKPYACTTCHKTFSRKEHLDNHIRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTSDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGAAPHACSYCNKTFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHIHIHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEYCQKTFTRKEHLTNHLKQHTGDTAHTCKVCTKPFTRKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKGAGARPYRCDICSKDFLCKGHLVSHRRTHNEAGEGTANTETPAETTEECSDCNKCIKTEVERPERKHDIRATAENRPAEVNVAQTNTQPNTTVMQITSQQVRPGTVTSASGVTTGTFTHTNPQHLNTAAGPAGPGPAPGPGPGPGPALAHHPLTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704247;
90% Identity
iTF_00761885;
80% Identity
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