Afla000789.1
Basic Information
- Insect
- Achlya flavicornis
- Gene Symbol
- -
- Assembly
- GCA_947623365.1
- Location
- OX392469.1:14813677-14820112[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 7.7e-06 25.9 0.1 4 39 68 102 68 108 0.89
Sequence Information
- Coding Sequence
- ATGATACCGCCTGATCCTAGCACAGTCACGAGTAAAGAAAAAGCTGGAGATGAAGAAATGAAAACTCATGCATTGTCACGAGATATACCGGAAGATATAGAGTCTACCCGATTTAATCTGAATATGAAACCAAAAGTTAGAACTAAGAGCTCTAGAAAACAACCCAAAGAAATATGCCGACGTAAAAGATACAACTCATTAAACTTAAATAAGGCCCTGCAAGCTGTCAAAGAGGGAATGAGTAAGAAGTTGGCGGCAAAGACTTATCAAGTGCCGCGGGCTACTTTGCAATATAGGATTAAGAACCCTGAGCACCAGTCCCGTCCAGGCCCTCCTACTATTCTGACGGAAAAGGAAGAAAAAGACCTCGAAGATTGGATAACACTTAGTTGTAGAAAAGGTTTTCCAAGACGCAAAGATGATTTAATTTGTAGTCTGGCGAATTTTCTGAAAAATAGTAAGAGGACCAGCGTTTTTAAGAAGGGCGAAAAGTGGTATAAACTATTTCTTCAACGACATCCAAACATTTCTGTCCGCACACCTGAGGCAGTTACAGCAGCTAGTGCTGCTGTGTCAGAAAACGATGTAAGAGGCTGGTTCACTCAAATTGAAGTTTACCTTAAAGAAAACGATTTATTTAATGTACTTTCAGATCCATCCCGAATATTTAACGGCGACGAGACAAACTTTCTGCTTTGCCCTAAAACAGGAGTCGTATTGGCTCCTAAAGGCGAAAGAAATGTGTACGAGATAGATAATGCGCTTGCCAAAACTTCATTGACCGTGATGTTTACATTTGCTGCCAACGGAGATCTTACACCTCCAATGGTTATTTTTCCAAATAAGCGGCTATCAGCTGACATTACGACTAAAGTGCCATCAGATTGGGGTATAGGGCTCAGCGACAATGGCTGGATGAAAGCCGAAATCTTTCACGATTATATCGAGACTGTACTACATCCTCACTTGATCAAAAAACGTACTCAGTTCCCCATTATACTGTTTGTCGACGGACACAAAACCCATTTGACGTATGCCGTTAGTGAGCTATGTAAGAAGCTGGGAATTGTTTTGATTGCTCTATACCCCAACTGTACCAGATTACTGCAGCCAGCAGATGTGTCAGCATTCAAGCCATTGAAATCTGGTTGGCAGAAAACTGTTTTGGAGTGGAGGCGAAATAATCCATCAGTAGCTCTCACTAAGACCAATTTCGTGCCGCTTCTAAATAAAACTATCAAAAACACGATCTCGTCATCCACAGTAATTAATGGATTCAGGGCAACGGGTCTTTGTCCATGGAATGTGAACGCTGTGGACTATACAAAATGTCTAGGCAAGGCAAATATTCCACATGCAGAAACTTTTAATAAACCTCACAAAGAGACAAAAGCAATGACCAAAGAACAATTTGAAATTATTATTGGAACACAAAAAATCAGTCAAATTGAATTAGGTATACTAAGACCAGAAGACATCTATTTGAAAAAAATTTGGGATTTTTTCACGGAAGTGCAAGAGGGTTTAAACAAAGACAATACTTCCAGTCAGATAGATGGAGATATAAGATTTGATGCAGTGGACATTGAAAATATGCCAGTTGTTATAAACGAAGACTTGATAGAAGATTTTTCTGATTGCATACCTGCACCCGCCTTAGAAGTAACTATAACAGCAGAAGACTTTGATGATGGCAACGACGATCGTTTATCTGACCATTCACAACAAGTTTTGCATATAACTCATAAAGCAGAAGTGTATAATTCAACAACTGAAAATACGAGAGTCTCTGTTCTGCCCCAACAAATTGAACGCCCTATGAATAAAGTCACACAAAAACAAAGCTCCGAATTTGACAAAATAGAAACATATATAGATCCAGTGCCTGTAAAGGTTGAAAAACGTAACACTGCAATGTTAAACCTTACTCCCATTAAATTAACTGATGTCCTTGTATTGCCAAAGTCACCTCAACGCAAAGGCGTTAGAAACATAAAGAGAGCTCCATTTGTACTAACTTCTGAGAAATGGAGATCTATAGAGAGCGAGAAACTCCGCGTAAAACAGGAAAAAGAAGAAGGCATAAGGAGAAGAAAAGAAGAAAGAGAAAAGAAGAAATTAGAAGCTAAAACTAAACAGACAAAACCAAAAGTACCAAAAGCTAAGTTGAAAATTAAGAAAGAACACGAAAGAGTAAACACTGGTGTGAAAAAAGTTGTTTTACTTGAAAACTTGAATACCCTGAATATCTCGTTAAACCCACTGCAAACGGCAAATGTAGACTGTATACCGGATGATGAGCAGGAGGATGAGGAAAATGATATTGTCTATGCTAATTTAATACCTGAAGATAAGGATAAAAAACAAAACAAGATTTTATACACTGAAGCTGAAATAGAGAAATTTTTGACTGAATTTGAAGACTAA
- Protein Sequence
- MIPPDPSTVTSKEKAGDEEMKTHALSRDIPEDIESTRFNLNMKPKVRTKSSRKQPKEICRRKRYNSLNLNKALQAVKEGMSKKLAAKTYQVPRATLQYRIKNPEHQSRPGPPTILTEKEEKDLEDWITLSCRKGFPRRKDDLICSLANFLKNSKRTSVFKKGEKWYKLFLQRHPNISVRTPEAVTAASAAVSENDVRGWFTQIEVYLKENDLFNVLSDPSRIFNGDETNFLLCPKTGVVLAPKGERNVYEIDNALAKTSLTVMFTFAANGDLTPPMVIFPNKRLSADITTKVPSDWGIGLSDNGWMKAEIFHDYIETVLHPHLIKKRTQFPIILFVDGHKTHLTYAVSELCKKLGIVLIALYPNCTRLLQPADVSAFKPLKSGWQKTVLEWRRNNPSVALTKTNFVPLLNKTIKNTISSSTVINGFRATGLCPWNVNAVDYTKCLGKANIPHAETFNKPHKETKAMTKEQFEIIIGTQKISQIELGILRPEDIYLKKIWDFFTEVQEGLNKDNTSSQIDGDIRFDAVDIENMPVVINEDLIEDFSDCIPAPALEVTITAEDFDDGNDDRLSDHSQQVLHITHKAEVYNSTTENTRVSVLPQQIERPMNKVTQKQSSEFDKIETYIDPVPVKVEKRNTAMLNLTPIKLTDVLVLPKSPQRKGVRNIKRAPFVLTSEKWRSIESEKLRVKQEKEEGIRRRKEEREKKKLEAKTKQTKPKVPKAKLKIKKEHERVNTGVKKVVLLENLNTLNISLNPLQTANVDCIPDDEQEDEENDIVYANLIPEDKDKKQNKILYTEAEIEKFLTEFED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00237451;
- 90% Identity
- iTF_00146351; iTF_00146350; iTF_00011914; iTF_00011911; iTF_00011912; iTF_00011913; iTF_00011915; iTF_01118224; iTF_01279202;
- 80% Identity
- -