Aeph013295.1
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- Hr39
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000092.1:76777-91520[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.16 1.7e+03 -1.7 0.7 85 172 120 211 53 238 0.46 2 4 1.7 1.9e+04 -5.1 7.9 82 171 226 314 168 360 0.51 3 4 6.3e-08 0.00068 19.4 0.1 1 20 440 459 440 465 0.91 4 4 5.6e-66 6.1e-62 210.6 0.0 164 408 502 758 469 758 0.84
Sequence Information
- Coding Sequence
- ATGAGCGCGATGACGAGCGAAGGAGATCCGGTGAAGGTGGAAGGGGTTCACGTGTCAGTCACCACTATCAGCATGTCCGGCTCAGAAACCAATAACGTACAATTCTCGTACAGTTCAAGCGGAGTCCGCATCAGCGTGTCTTCGGACCCACATGACGAAGACTCCACTGATGCGGAGATCTCTAAAATAGACTTCACACAACATCAAAATGAGGTAAACATGCGAAACAAGAAAAAGCGGCCGTCGAGTGGTGCGCAGTACGACACGCTGCCAAACGACCGGGAGCGACCGATGTCCTGGGAGGGAGAACTGTCCGACTCGGAGATGGTGATAGACACGAGTGTTAACAATGATGAAAATAGTAGCTCATTAGATCTGCAGTCGTCTCGAGACTCGATCGACACTCTCCGCAATGTGACCATCAAGTCGGAACCGGTGAAGACGGAGTCGTACCAGAGCGTCGACGACCAGCGTGTCTTAGATCTTAAGTACCCGATGCCTCTACAACAACACCAGAGAAGCCTTAGCATGAACAGGATATCAGTGTTAACAGACAATACTACTCTCTCGCTCGCTCGGCGGCCTTCGTCTCCTGCCTCAGTCTTAACAGACCAGAATAATATTCCCATAATGCCTCAAACTTCTCTAGGGGAGGTCCAGAATTTGACGATCAAAAAAGAAACTCAGTTATCAGAGCTCAAGTGCGAGCCAACAGTGGGCATGGATAAACTGTTGGGTGCTCTCCACGGATCTCCACTTCTTGGTAGACTGCCAAGGGTCCAGTCCAGTGCCAGTACAGACTCCGCAGTGCATTCCATGTATACACACAGTGTATACAGCAGCCCGTCGGCCAGCCCGCGAGCGTCACGCCACTACACGCCGTCTCTGTCCCGTAACAACAGCGACGCGTCCCACTCGTCTTGCTACTCGTACAGCTCGGAGTTCTCGCCTACTCACTCTCCTGTACAGGGTCGTCACCCACACGTGGTATACCGCGAGGCAGCGCCAGTGTTCCCCGCCTCACCAGCGCACGATGATGACACCGAGCCCACGGATGATAGGCTGCATCACCACCAAGGGATCAGTCGCCAACAGCTCATCAATAGTCCAtgcccgatatgcggtgacaagatcagcggcttccactacggcatattctcgtgcgagtcctgcaaaggtttctttaagcggaccgttcagaaccgcaagaactacatgtgccttcgtggcggcaactgtcctgttactgtgtccactagaaagaagtgtccagcctgccggtttgacaagtgccttgggtgtgggatgaaacttgaagCGATTCGTGAGGACCGGACTAGAGGTGGTCGCTCTACGTACCAGTGTTCATACTCGCTGTCGGGCGCGGCGTCCACCGGCTCGCTGCTGTCCGCGCACGTACCCACTACGCTACGGCACGCCTCCAGCCTCACTTGCGTCAATGGTCCAGGCTCATACAACAGTCGAGGGGAGTCTAGTAACAGCCGACTAACGCCAGATATACCGCAATTACTGCAGGAGATAATGGAAGTAGAACACTTATGGCAGTATAATGAGTCCGAACTGACCAGGCTAGGGAAGTCCCCGGGGAGTCCCTCCGCGAACCCGCTACTAGCCGCCAGTGGAATCACTGCGCAGAACTCCAGCCCCGATTTCTTAGCTGACCTGTGCAATATCGCCGATCACCGCCTTTACAAGATAGTCAAGTGGTGTAAAAGCTTGCCTCTGTTTAAGAACATATCGATCGACGACCAGATCTGCCTGCTGATCAATAGCTGGTGCGAGCTGTTGGTTCTGTCGTGCTGCTACCGCGGCGTGAGCACGCCCGGCGAGGTGCGCGTCGGCGGCGGCCGCGGCATCACCCTCGACCAGAGCGCCAAGCTAGGTTTGACGCCCTGTATAGAACGAATGCTAAGCTTCACCGACCATCTGAGGAGACTGCGAGTAGACCGATATGAGTACGTGGCATTGAAGGTCATCGTGTTGCTGACGTCAGATACTCCCGAACTTCGCGAGAGTGAGAAAGTGCGCGCGTCGCAAGAGAAAGCGCTCGCAGCGCTGCAAGCGTACACGGCGAACCACTCGCCGGACACGCCCGCCAAGTTCGGTGAACTACTGCTACGGATCCCGGAGCTGCAACGAACTTGCCAATTCTTCATGCAAGTCGGCAAAGAGATGCTCAACCCAGCGAATAAAAATAAAGACGGCGAAGGTCCAAGCTTCAACTTGCTCATGGAGCTGCTCAGAGGCGACCATTGA
- Protein Sequence
- MSAMTSEGDPVKVEGVHVSVTTISMSGSETNNVQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFTQHQNEVNMRNKKKRPSSGAQYDTLPNDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKSEPVKTESYQSVDDQRVLDLKYPMPLQQHQRSLSMNRISVLTDNTTLSLARRPSSPASVLTDQNNIPIMPQTSLGEVQNLTIKKETQLSELKCEPTVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREAAPVFPASPAHDDDTEPTDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVSTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPTTLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPQLLQEIMEVEHLWQYNESELTRLGKSPGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLDQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDTPELRESEKVRASQEKALAALQAYTANHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042698;
- 90% Identity
- iTF_00806824;
- 80% Identity
- iTF_00006366;