Alag000791.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- tfip11
- Assembly
- GCA_031841125.1
- Location
- CM063106.1:14729626-14740335[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-84 9.2e-80 269.2 20.7 1 275 385 655 385 655 0.98 2 2 1.1 2e+04 -4.1 0.1 109 123 668 682 658 688 0.49
Sequence Information
- Coding Sequence
- ATGTCCGGAGATGAGtatttgaagtttgaaattacTGAAGATGATATTCAGAATGAATTCACGCAGCACAAAACAAGGAGGTTTACGAAAAATCAACAGATATATGGAATGTgggctgatgatgatgatagcGAAGATGATAACCGAGGGAGGAAATTctcgaaaactaaaaagaatTACACGGCACCTGTGAATTTTATTGCCGGTGGCGTTCATCAGCCTGGGCAGGATAAATCGAAAGCTCCAGAACCCGAAAAAACGGAAGAGgatgaattgttttctgattctAGCGATGAAGAACTTAGACCGTCGTCCTCGCAAAGAAATACTAGACCAGAAGCGAGTAGCTTTAGTGAATCCGATCTCgcaggatttagaaaaagtggTGTCAAAATGCCCACTGCTCTGATTCAACAAGGAGTTGGGAACTGGGAGAAACATACGAAGGGCATTGGAGCCAAATTGTTATTAAAAATGGGTTATCAACCAGGAAAAGGTCTCGGCAAGACGCTGCAAGGAATTGATGCTCCAATTGAAGCTCACTTACGAAAAGGAAGAGGCGCCATTGGTGCGTATGGTCCtgaaaagaaacagaagaaaatgaaatcggACTCAGCAGTAAAAGAAGAAACGGAAACGaacaaattggaaatttctgaGCGAACATCGCTGTGGCGAAAAGAGGGGTCTGAGTCGACTAAGAAAATTCGATACGTTTATAAAAGCATCGATGAAGTTTTAGAAGAAAGTAAGAAaccaggaaagaaaaaaattgagattagTGAACTGAGTAAAGTAAAAGTGATTGATATGACGGGCCCTGAGCAACGGATATTATCAGGATACCATGCGATTGCCGGAGTTCAAAAACCAGCCGAAGAATGGGAAGTGAGAAAGGATAAAAAATTCTCCAATTTCGCTATGCCTGAACTGCAGCATAATTTGAATTTGTTGGTAGATGTGTCGAAAGAGACAATCATAGAGAATAGCAGTAAAATCGATTACGCTGTAGGCCGTTTGGAACTGCTGCATAATCAAGTGAAGGATTTTGGTAGGACACTGAAGCAGGAGAAATTGGTAATGGATAGTTTAAAGAATATGATTGACACTGTAGAATCGGTTGTACAGTCTTCCAAAGAGAAATCATTGTCGCTAGATAAAGCTGAAGAAATAATCTCTTCGTTGAAGAACAACCATTACACAGAATTTTGCGCATACGAGATCCCAGTATTAGCCGTGAATGTTGTGAGGCCATTGTTGAAAGAATACCTAGAAAATTGGAAACCTTTGGAAGACCCTAAAATGCCGATTCCAGAATTCGTGAAGTGGAGAAATATACTTCTGATTGAAGACACCGCTGGGCAGACTCTGGACTCATATAAACTTAATCCGTATTATAAACTGGTGTGGGATACATGGGTACCCTGTGTTCGTGCGGCTACTAActcGTGGGAGTGTCGTCAGTGGTCGCCAATGGTCGATCTAATCATGAATTGGATGCCGTTAATATCGAAGTGGATTTTGGAGAATATTCTACGAGATATGATATTGCGAAGGATACAGTATCAAGTCGAAGAGTGGAATCCGTTGACCGATCGTGTTCCTATTCATTCGTGGATTTATCCATGGATTGCCATGTTAGCCAAATCCTTCGAAACGTCCGTGTACCCAACCATTCGCCAGAAACTCAGTAAAGCCCTACTTAATTGGCATCCATCTGACAGCTCAGCGAGACTAATGTTACAGCCGTGGATGAGTGTTTTCGATCAAGGAGAAATGGAGGCGTTCTTAGTCAACAACATAGTTCCCAAGTTGCAAATTGTCTTGCAGGAGTTCATTATCAATCCACACCAGCAGTGTCTAGATAATTGGAATTGGACGATGGAGTGGTCAGAAATGATTCCGGCCCACACAATGGCTGGATTACTGGACCGTTGTTTTTTCCCTAAATGGTTGCAAACGTTGAGCGTGTGGTTGAACATGAATCCAGATTTGGATCAAGTCAGGAAGTGGTTTAGCGGATGGAAAACCATCATTCCAGATAGCATCAGAGCTCAGCCGATAGTTTGTGATCACATACGTACCGCTCTTGAGTTGATGAGCAAAGCTTTTGGCGGCGCGCCAGCTCCAGAACGAGCTCCTCGAAGTTCGGAAGTAAGTGGTGAAGATTTGACGCCGGTGTTTCGAAAATTGTCCGTGACCAGTTATTATAAAAAGCCCTGTTTGCAGGAGCCTGTTGAAGCGGTGAGAATCACGGAGGTGCCGGTGTCGCTGAAAAGTATGGTACAGGCTCATTGTGAGGAGAAAGGCATACTATGGGTCCCCATTCCTAATCGTTTCATGGAAGCTAAACAGGTGTATAGGTGCGGCAAATTGCAAGTATATTTCGATAGAAACGTGTTGTTCGTCAGTCAAGGCGGAGGAACTTTCATACCAATGTCGTGGCAGGAAATGCTCGAAAACGCCATTTAA
- Protein Sequence
- MSGDEYLKFEITEDDIQNEFTQHKTRRFTKNQQIYGMWADDDDSEDDNRGRKFSKTKKNYTAPVNFIAGGVHQPGQDKSKAPEPEKTEEDELFSDSSDEELRPSSSQRNTRPEASSFSESDLAGFRKSGVKMPTALIQQGVGNWEKHTKGIGAKLLLKMGYQPGKGLGKTLQGIDAPIEAHLRKGRGAIGAYGPEKKQKKMKSDSAVKEETETNKLEISERTSLWRKEGSESTKKIRYVYKSIDEVLEESKKPGKKKIEISELSKVKVIDMTGPEQRILSGYHAIAGVQKPAEEWEVRKDKKFSNFAMPELQHNLNLLVDVSKETIIENSSKIDYAVGRLELLHNQVKDFGRTLKQEKLVMDSLKNMIDTVESVVQSSKEKSLSLDKAEEIISSLKNNHYTEFCAYEIPVLAVNVVRPLLKEYLENWKPLEDPKMPIPEFVKWRNILLIEDTAGQTLDSYKLNPYYKLVWDTWVPCVRAATNSWECRQWSPMVDLIMNWMPLISKWILENILRDMILRRIQYQVEEWNPLTDRVPIHSWIYPWIAMLAKSFETSVYPTIRQKLSKALLNWHPSDSSARLMLQPWMSVFDQGEMEAFLVNNIVPKLQIVLQEFIINPHQQCLDNWNWTMEWSEMIPAHTMAGLLDRCFFPKWLQTLSVWLNMNPDLDQVRKWFSGWKTIIPDSIRAQPIVCDHIRTALELMSKAFGGAPAPERAPRSSEVSGEDLTPVFRKLSVTSYYKKPCLQEPVEAVRITEVPVSLKSMVQAHCEEKGILWVPIPNRFMEAKQVYRCGKLQVYFDRNVLFVSQGGGTFIPMSWQEMLENAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -