Aori029485.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acanthacorydalis orientalis
Gene Symbol
-
Assembly
GCA_034766995.1
Location
CM068321.1:28615451-28618185[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 8.7e-05 0.012 17.2 2.5 2 23 145 166 144 166 0.96
2 16 1.9e-05 0.0027 19.2 4.9 1 23 172 194 172 194 0.97
3 16 0.00014 0.019 16.5 4.2 1 23 200 222 200 222 0.97
4 16 7.2e-05 0.01 17.4 0.5 1 21 228 248 228 249 0.94
5 16 5.9e-07 8.4e-05 24.0 0.1 1 23 256 278 256 278 0.98
6 16 2e-05 0.0028 19.2 0.0 1 23 433 455 433 455 0.98
7 16 0.00013 0.018 16.6 8.1 1 23 461 483 461 483 0.97
8 16 0.00022 0.031 15.9 6.4 1 23 489 511 489 511 0.97
9 16 0.04 5.6 8.8 0.8 1 22 517 538 517 540 0.90
10 16 0.0067 0.95 11.2 5.0 1 23 552 574 552 574 0.97
11 16 0.00038 0.054 15.1 6.6 1 23 580 602 580 602 0.97
12 16 1.8e-06 0.00026 22.4 0.5 1 23 609 631 609 631 0.96
13 16 2.4e-06 0.00033 22.1 1.2 1 23 637 659 637 659 0.98
14 16 2.6e-06 0.00037 22.0 0.7 3 23 667 687 665 687 0.96
15 16 1.7e-05 0.0024 19.4 0.1 1 23 693 715 693 715 0.99
16 16 0.46 65 5.4 1.1 1 23 720 743 720 743 0.96

Sequence Information

Coding Sequence
atggatactgttgaatataatttcgataaaatttgtAGAGCGTGTAAAGGGGAGGCCGAAGAATTGTTTTCCGTTTTCGAAACAGAAAAAACATCTGGTCGACCATCTAAACTTGCAGATATGTTAATGGCGTGTGCATCGGTGCAGGTGGAGCACGGAGATGGTTTACCAGGCTCTATATGTATGCAGTGTGTTGACCAATTGAGTAATGCTTATACGTTTAAAAAACAATGTGAGAGTACTGATACAAGTCTGCGTTTATATATTCGTCAAAAGGATGTTAAAGAAGAGAGTGCagtaaataatacagaaattgatgataatattttagattttaattctatttataataatgaagttTCTACTTTAAATGAtgcaaaaacaataaaaaccgAACCTGTTGATATTACATGTGATGATGACCGTACTTTAATGTgcaatgtttgtaataaaaaatgtacatctgCAGACGAACTAAAATTACATCAACAAAAACATGCTGGAACAAATATCcacaaatgtaaaatatgttcaaaagaATACTCTAGATTAGGTCATTTACAAAGACATATGGTGAAACATGAACCTCGCcgtgtacatgtatgtacacTTTGTAATAAAACTTTGACAAAAGTAGAACATTTGAAACGTCATATGATTACTCATGTAAAAAATAAGCCTTATGTGTGTGAAACTTGCAAACGTGGTTTTAATCGACCAGATCATTTAATGAATCATGCTAAACGTTGTAAAGGTGATAAACCATATGTTTGTGAAATCTGTAACAAAGGATTTAGTCGTGAAGATAGTTTACAAGTGCATCTTGCTACTCATATCGCAAAAGTTGATATGAAACCAATGTTAGATTCACTTGATAATTATGAAGAACATTATGAGGTTGTTGAAAATTATGTAGGAGTATCAGATTTAGAAGAACCAGATAATGGTTCTGATTCTGATGTAATATCTAATATAGACTGGGCAGAACCAGAGGTAAATATAGTGGAAAAAACAGAATGCGAATCAAATATAACATCACTAAGTCAAAATATTAAGTATGAAGAAGAGcagttacaagaaaataattctaaaaacaaTGATTCTAAAAGTAAAGAATCTGATGAAGAATCAAAACCTTTGTTAGAAAGAATAAAACCAAAAGTAACTGTAATTAGTGAAGTTcctgtaaaaagaaaaagaggCCGCCCCAGAAAAACAGATTCTACACCTTTTAAAACTGTTAAGTCTGAAGAAAATGGACAAGAAATTATAGCAGCTATTGAAAATAAAGCAAAATATCCTTGTGATGTTTGTGACAAGGTGTTATCTACATTGATAGGACTTGAAATACATATGCGAAAACACACAggattaaaattgtttcattgtAAAGTGTGCAATAAAAAGTTTACTCGTTCGAATCATATGAAACGTCACTTGTTAAGTCATGATGAATATAAACCTTTTAATTGTGatgtttgtcaaaaaaaatttactagGCATGAGCATTTAATCAAACATTCAAAAAGTCACGCTTCAGAAAAAAAGTTTGAATGTGAAGTATGTTTTAGACTTTTTGGTCGAATGGAACAACTGGAGAAGCATAAGGCTTTCAAACATAACATTGGTGAAAAAATGCCAACTGAGAAGAAATACAAATGTACAgtatgtaataaacattttacaactGAAAAATATAGAGATACACATCAAAAAGCTCATAGTGGAGAAAGGACATTTGAGTGTAAAACttgtttaaagaaatttaaatcaaaatctcATTTGACAGAACATACTAAATTTCATAATGAATGTTCAAAAAAGTTCTTGTGTTCAGAATGTGGACAAAGATTTATAAGAAACGATTATCTAGTTATTCATATGAGAAGACACCGTGGAGAAAAACCATTTAAATGCAAATACTGCGGGAAAGGTTTCCCTCGTACAACTGATTTAACAGTACATGAACGTTACCATACCGGTGAAAAAACTCATCTTTGTATGGTATGTGGACGTGGATTTGGAAGAGCCTATAATTTAACTGTTCACATGCGAACTCATACTGGAGAAAAACCCTATCAATGTACATATTGTGATGCTGCTTTTGCCCAAGGAAATGATCTAAAGGCTCATGTACGAAGACATACTGGTGAAAGATATCATTGTGATTTATGTAGTGAAGCATTTCTTATGGGGTATTTGTTAACTCAACATAAACGAACCGTCCATGGGGTCGATGTGAAATCTCATATTCGAAGATTACATCCATCAGAAAGAGTTCACCTACCCAATTCACAACACAATACACAACCAAATATCAAACCAATTCCAACTGCACAGTTACAAATATTACATAGTACTAGTACTTTACAGTCACAAGTTGAAGTTCAAGACGATCTGCAACAGCAAATCTCATTACCTACTCCACCCATACTGCCAACAATCTCACATTCAGTGTCTGATGCTGTTGCGTAG
Protein Sequence
MDTVEYNFDKICRACKGEAEELFSVFETEKTSGRPSKLADMLMACASVQVEHGDGLPGSICMQCVDQLSNAYTFKKQCESTDTSLRLYIRQKDVKEESAVNNTEIDDNILDFNSIYNNEVSTLNDAKTIKTEPVDITCDDDRTLMCNVCNKKCTSADELKLHQQKHAGTNIHKCKICSKEYSRLGHLQRHMVKHEPRRVHVCTLCNKTLTKVEHLKRHMITHVKNKPYVCETCKRGFNRPDHLMNHAKRCKGDKPYVCEICNKGFSREDSLQVHLATHIAKVDMKPMLDSLDNYEEHYEVVENYVGVSDLEEPDNGSDSDVISNIDWAEPEVNIVEKTECESNITSLSQNIKYEEEQLQENNSKNNDSKSKESDEESKPLLERIKPKVTVISEVPVKRKRGRPRKTDSTPFKTVKSEENGQEIIAAIENKAKYPCDVCDKVLSTLIGLEIHMRKHTGLKLFHCKVCNKKFTRSNHMKRHLLSHDEYKPFNCDVCQKKFTRHEHLIKHSKSHASEKKFECEVCFRLFGRMEQLEKHKAFKHNIGEKMPTEKKYKCTVCNKHFTTEKYRDTHQKAHSGERTFECKTCLKKFKSKSHLTEHTKFHNECSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCMVCGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHVRRHTGERYHCDLCSEAFLMGYLLTQHKRTVHGVDVKSHIRRLHPSERVHLPNSQHNTQPNIKPIPTAQLQILHSTSTLQSQVEVQDDLQQQISLPTPPILPTISHSVSDAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01050537;
90% Identity
iTF_01050537;
80% Identity
-