Aori011308.2
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- -
- Assembly
- GCA_034766995.1
- Location
- CM068315.1:46618670-46622690[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-12 1.2e-08 35.6 0.0 2 39 321 359 320 363 0.90 2 4 3.6e-13 1.4e-09 38.7 0.2 1 39 374 412 374 415 0.95 3 4 2e-18 7.6e-15 55.5 0.0 1 45 429 474 429 474 0.97 4 4 8.4e-20 3.2e-16 59.9 0.0 1 43 481 524 481 526 0.96
Sequence Information
- Coding Sequence
- ATGATGACGGCGAGGTACGGGTTCAAGGCCAGTCACGCTTGTCGCGAGTCTCTTCTGAAAACAGcagatcaattaaaaataaaaggtttATGTGACCTCCCAggagaaaatgaaaatgatcGCAATACAccaaataattcttattatgCATTAACTGATGAATCGCCAGTAGCACcTGAAAAGGCTGATCgtgtaataaaaacagaaaaaacaaACTATAGTTCATTAGAAGCAAGTgaagaaaatgaagaattaaatatgCCAGTTGTATTATTAGACTCAAAAGATAAGCCACAAGGTGCATCGGAGGAACGAGACGTTTGGTCACCGTCTGGTACAAGTGACAATCACCCTGTCAATATGACAGGCCATGGATTGATTCCGGCTCAGaatctCTTTCCGGGTCATGTTGAACTACCACCAGAACCCCCAGCACCTGCAGCAACGCCAGTACCATGCTCACCACAAGAATTAATGCAATCTTCACATTTATCTCATTGTAGCCCCACAACACATCATGATCTTAgtgaGACTTTGTATTATCAAAAACcacttttcatttatatgatttttattatagaatcaaATATGTCAACTGGTAGCTGTGCAGGTGGAATGGGaagtgaaaatgatattaaaattaaatttgaaactttaAGATCAGTTGAATCGATGGATGCTTGCAGTCGTGCTAGTAGTCATACATCTGGCTTAGATAATGGCGAAGAGCATCCAATTAGCTCACATTCTATGCATATGATGATAACTCCTGAATTATTAGGACTCATCCCTAGTGGATCAGATATGGCTGATGATCCTTTGGGTTCAAATGGTATAAAAAGCTCAAATGGTCATAGTTCAACTGATAATCTTTCTAGAAGTCATATGAACAATGGAATAATGGGAAATTTATCAAGTTCTGGAGGTACCGGTCATGGAGGTGGACCTAAAACTTGGAGTCAGGAAGATATGGAATTAGCATTAGATGCCCTTCGAAATCACAATATGAGTTTAACaaaaGCTTCTGCAACATATGGAATTCCATCTACAACATTATGGCAAAGAGCACATAGACTTGGTATAGATACACCTAAAAAAGAAGGACCTACAAAGTCTTGGACAGAAGAAAGTTTAAATTCTGCATTAGAAGCATTAAGAACTGGTACAATATCAGCAAATAAAGCAAGTAAAGCATATGgtatACCTAGTAGTACACTGTATAAAATAGCAAGACGTGAAGGTATAAGATTGGCAGCACCATTTAATGCTGCTCCTACAACTTGGTCACCTGAAGATTTAGAACGAGCTCTAGAATCTATTAGAACTGGACAAACATCAGTACAAAAAGCATCTGCAGAATTTGGAATACCAACAGGTACACTTTATGGTCGATGCAAAAGAGAAGGAATAGAACTTTCTCGATCAAATCCTACTCCATGGTCTGAAGATGCAATGGGAGAAGCTTTAGAAGCAGTAAGAGTTGGACAAATGTCTATTAATCAGGCTGCAATCCACTACAATCTTCCATATTCATCTTTATATGGACGTTTCAAACGAGGGAAATATGATACAGATACATCAAGTGGCAATATTGATACACATTCATCAAATGATCAAAATAGTTCTAGTGCAATTCAAGACCATTCTATGTCACAGTATCCAAATACAAGTAGTTCAAATCAAAGCCATACACATGTCCACAATATGTCATCATCACAAACTCATAATATGTCAGGATCACATTTAAATATGACAAATAATCAATATCAGCATCAAAACATCAGTTGA
- Protein Sequence
- MMTARYGFKASHACRESLLKTADQLKIKGLCDLPGENENDRNTPNNSYYALTDESPVAPEKADRVIKTEKTNYSSLEASEENEELNMPVVLLDSKDKPQGASEERDVWSPSGTSDNHPVNMTGHGLIPAQNLFPGHVELPPEPPAPAATPVPCSPQELMQSSHLSHCSPTTHHDLSETLYYQKPLFIYMIFIIESNMSTGSCAGGMGSENDIKIKFETLRSVESMDACSRASSHTSGLDNGEEHPISSHSMHMMITPELLGLIPSGSDMADDPLGSNGIKSSNGHSSTDNLSRSHMNNGIMGNLSSSGGTGHGGGPKTWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLERALESIRTGQTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDTDTSSGNIDTHSSNDQNSSSAIQDHSMSQYPNTSSSNQSHTHVHNMSSSQTHNMSGSHLNMTNNQYQHQNIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01050301;
- 90% Identity
- -
- 80% Identity
- -