Ater019548.1
Basic Information
- Insect
- Abscondita terminalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_013368085.1
- Location
- JABVZW010003061.1:1-3816[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.85 8.6e+03 -2.9 1.4 14 19 158 163 158 163 0.86 2 18 0.0048 49 4.2 3.0 4 12 194 202 193 202 0.94 3 18 3e-08 0.00031 20.9 17.0 1 19 208 225 208 225 0.99 4 18 1.6e-06 0.016 15.4 16.3 1 18 261 278 251 279 0.91 5 18 1 1e+04 -3.1 1.2 6 10 304 308 303 308 0.89 6 18 3e-08 0.00031 20.9 9.8 1 18 314 331 314 332 0.96 7 18 0.00012 1.2 9.4 7.0 1 18 367 384 367 385 0.97 8 18 0.36 3.7e+03 -1.7 0.6 1 5 394 398 394 403 0.89 9 18 4.5e-05 0.45 10.8 16.1 3 18 421 436 419 437 0.91 10 18 1.2e-09 1.2e-05 25.3 13.4 1 18 446 463 446 464 0.98 11 18 0.069 7e+02 0.6 4.8 10 19 513 522 510 522 0.89 12 18 0.041 4.1e+02 1.3 6.3 3 12 533 542 532 542 0.87 13 18 2 2e+04 -6.9 4.5 14 18 570 574 570 574 0.86 14 18 7.6e-05 0.78 10.0 3.6 1 11 611 621 611 622 0.97 15 18 1.2 1.2e+04 -3.3 1.2 5 10 638 643 638 643 0.89 16 18 3.3e-06 0.034 14.3 13.0 4 19 653 668 651 668 0.95 17 18 2.3e-05 0.24 11.7 9.8 1 16 711 725 711 731 0.93 18 18 0.4 4.1e+03 -1.9 0.9 5 10 760 765 760 765 0.94
Sequence Information
- Coding Sequence
- atgcatgGCAGAAATAATAAGTCGTCGAACGCCTGGTTTAAAAACGATACACGATTTAAAAGTTCATCGAAACCTAATAATTcagaagtaaaatttaaagaagtacACAGGAAGTTTCAAGAGGCTGTAAAAAAGCATACCATAGACTACAATTCGTCTTCAGAAGAAGAGGAGTTGCAAATTAACGACATAATagAAAGTACTTTTAAATCATATGCTGAAATTGGAGGAGCTAATGACAACTTGAATAGGACAAACGTATTCCTTACTGATACCGCTACATCAGGTGTGAAAATATGTGTAATTTGCATATCTTCAGTGAAAAGGACTGATAATGTTTGGAACTGTGAGGAATgcttttcaatatttcatttgatGTGCATTCAACGCTGGTCTAAAGATACGGTTTTCCAACTGAAGAAATCATTAAGTGAAGGACTCCCTGTTAAAAACAATCTCAAGGTAGTTTGGGATTGTCCCAAATGCAGGCAACATTATGATTCGTCTGATATTCCTGACAAGTATTTGtgtttctgtaaaaaaacagtaaatccTACTTTTCAACCTTTATTGATACCTCATTCTTGTGGAGAAACTTGTCACAAAGATTTAAAGCCCTTTTGCGGGCATAAGTGCCTGTTACTCTGTCATCCAGGTCCTTGTCCTCCTTGTCCTCAAACTGTCGATGTTACTTGTTATTGTGGTAGAAAACCATCTCGAACTCAAAGATGTAACAACAGGAAATGGTCATGTGGTACGCCTTGTGAGAAATTACTGTCTTGCAAAAATCACAAGTGTTCACAGCTTTGCCATGGAGGTGAGTGTGAACCCTGCCTCAAAAAGAGTATACAGAAGTGTATATGTGGAGCTAAGAGTAAATTACGGGATTGTTCTACACCAGTTTGGCAGTGTGATCAGGTGTGTAATAAGTTGCTTGAATGTGGAAATCATACATGTCTGGCAAAGTGCCACGTGGGCACTTGTGGGTTTTGTACATTGACTCAACCACGTACATGTCCTTGCGGAAAAACTACATTCACTCTAGAATGCACCGAAGACACTCCCACTTGTGGAGATACTTGCGACAAATTGTTAGAATGCGGAGTACACATCTGCTTTCAGCGTTGTCACAAAGACAAATGTGGAATGTGCTTGGAAGTGGTTAGGAAGACTTGTCGATGCGGCCTACATACCAAAGAGGTTCAATGCAAAAAAGATTATCTTTGCGAGACTAAATGTAAGAAGCTGAAAGATTGCTATAAGCATCCGTGCAATCGTAAGTGTTGTGAAGGTAATTGTCCACCGTGCGAAAAACCGTGTGGTCGCACTTTAGGTTGCGGCAATCACAAATGCATTTCCGTTTGTCACAGAGGCTCGTGTTATCCATGCCATTTAGCTGAAACGGTTTCTTGCAGGTGCGGAGGTACTAGTGTTACTGTGCCTTGTGGTAGGAAGAAAAAAACTAGACCACCGCGATGTCTACTGCTTTGCAAAATTCGTCCCAACTGCCACCACGAGCAACGAGAAAAGCACAACTGCCACTTTAATAGTTGCCCACCTTGTCgtcaaatttgtaacaaaaaattaacgtcATGTACCCATAAGTGTCCGGTCGCGTGCCATTCATCCGTCTTAGTAAGGATCGAAGGTCAAAAAGGATCGATGCCTTGGGAACAGATCGAGCCGCAACTGGTGCAAAAGTCTCTTCCTTGTCCAGATTGCATCGTATCTGTTCCCGTTACTTGCCTGGGCAAGCACGAAACGGCCGATTGGCCTTGTCACCTTGCGAAAACGTCGAGTTGCGGGAGACCTTGTGGGCGAAAATTGGAATGCGGCAATCACGACTGCTCCTTAGCTTGTCACCTTGTCGAAGACGCCAATGATGAAAAAACGGCAGGAACAAACTGCTTAAAATGCACAAGTCCGTGTTCGAAACCCAGACCTAAGGGCTGTTTTCATTCGTGTCTAAAACCTTGCCACCCCGGCGATTGTTCACCGTGTAAACAAATGGTGCGCATTAAGTGCTTGTGCGGACTGAATCAACCCTACGTATTATGCAGCACTTGGACGTCCTCGTCTAACAAAGAGGAATTAGAAAGCTGTGGAAATCAATGTCCCAAAAACTACCCTTGTGGACATCGCTGTCGTTCGAACTGCCACGCTGGAGAATGCCGGAATTCTGAACTTTGTAAAAAACGAGTTAAAATCACTTGTAGTTGCAAACGCATTAAAAAAGAGTTTTCTTGCGAAGAATTTCGTTCCACTGTTGCTATGGTCAAATGCGACGAGGTATGTCAGGAAAAGCAAAGGGAAGAAAAAAAAGCGAGAGATTTGGCAAATGAAAGAAAGCGTAAGGAGgaggaattgaaaaataaaatagaattggaAAAGTACGAAAAGTTGTTACACGGCAAGAAGAAATCTAAAGAACGGAGAGTTATTAACCAAACCGAAGAAGTACTTTTGATAAGAAAGTATTGGATGGTTGCAGTATCATTAGTGGTTGTGGTAGTTggtgtttattttatgttttttgttcgAGGAGTGTGA
- Protein Sequence
- MHGRNNKSSNAWFKNDTRFKSSSKPNNSEVKFKEVHRKFQEAVKKHTIDYNSSSEEEELQINDIIESTFKSYAEIGGANDNLNRTNVFLTDTATSGVKICVICISSVKRTDNVWNCEECFSIFHLMCIQRWSKDTVFQLKKSLSEGLPVKNNLKVVWDCPKCRQHYDSSDIPDKYLCFCKKTVNPTFQPLLIPHSCGETCHKDLKPFCGHKCLLLCHPGPCPPCPQTVDVTCYCGRKPSRTQRCNNRKWSCGTPCEKLLSCKNHKCSQLCHGGECEPCLKKSIQKCICGAKSKLRDCSTPVWQCDQVCNKLLECGNHTCLAKCHVGTCGFCTLTQPRTCPCGKTTFTLECTEDTPTCGDTCDKLLECGVHICFQRCHKDKCGMCLEVVRKTCRCGLHTKEVQCKKDYLCETKCKKLKDCYKHPCNRKCCEGNCPPCEKPCGRTLGCGNHKCISVCHRGSCYPCHLAETVSCRCGGTSVTVPCGRKKKTRPPRCLLLCKIRPNCHHEQREKHNCHFNSCPPCRQICNKKLTSCTHKCPVACHSSVLVRIEGQKGSMPWEQIEPQLVQKSLPCPDCIVSVPVTCLGKHETADWPCHLAKTSSCGRPCGRKLECGNHDCSLACHLVEDANDEKTAGTNCLKCTSPCSKPRPKGCFHSCLKPCHPGDCSPCKQMVRIKCLCGLNQPYVLCSTWTSSSNKEELESCGNQCPKNYPCGHRCRSNCHAGECRNSELCKKRVKITCSCKRIKKEFSCEEFRSTVAMVKCDEVCQEKQREEKKARDLANERKRKEEELKNKIELEKYEKLLHGKKKSKERRVINQTEEVLLIRKYWMVAVSLVVVVVGVYFMFFVRGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003450; iTF_00151946;
- 90% Identity
- -
- 80% Identity
- -