Acer044476.1
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- nfxl1
- Assembly
- GCA_030710515.1
- Location
- JALBCR010001580.1:172-11582[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.2 3.8e+04 -2.8 1.4 14 19 127 132 127 132 0.86 2 18 0.0076 2.4e+02 4.2 2.5 4 12 163 171 162 171 0.93 3 18 0.00074 23 7.4 5.1 1 12 177 187 177 187 0.97 4 18 0.00013 4.2 9.8 14.8 1 18 213 230 203 231 0.91 5 18 1.4 4.5e+04 -3.1 1.2 6 10 256 260 255 260 0.89 6 18 1.3e-06 0.042 16.2 11.6 1 18 266 283 266 284 0.97 7 18 2.5 7.9e+04 -3.8 0.7 6 10 309 313 308 315 0.58 8 18 0.00016 5.2 9.5 7.0 1 18 319 336 319 337 0.97 9 18 6.2e-05 2 10.9 16.1 3 18 373 388 371 389 0.91 10 18 4e-11 1.3e-06 30.6 11.3 1 18 398 415 398 416 0.97 11 18 0.097 3.1e+03 0.7 4.8 10 19 465 474 462 474 0.89 12 18 0.053 1.7e+03 1.5 6.5 3 12 485 494 484 494 0.90 13 18 3 9.6e+04 -4.7 2.8 14 18 522 526 522 527 0.87 14 18 0.00014 4.5 9.7 4.7 1 11 563 573 563 574 0.96 15 18 0.62 2e+04 -1.9 1.2 5 10 590 595 590 595 0.92 16 18 7.5e-06 0.24 13.8 17.0 1 19 603 620 603 620 0.93 17 18 2.5e-05 0.78 12.1 11.1 1 16 663 677 663 683 0.92 18 18 0.57 1.8e+04 -1.8 0.9 5 10 712 717 712 717 0.94
Sequence Information
- Coding Sequence
- atgcatgaagtacACAATAAGCTTCAAGAGGCTGTAAGAAAACATACCAAAGACTTCGATTCGTCTTCGGAAGAAGAGGAACTGCTAATCGATGACATAATAGAAACTACTTTTAAATCGTATGCTCAAAGTGGGGGTACTAACGAGAACTTGAATAGGGCAAATGTATTCTTAACCGATACCGCTACGTCAGGTgtgaaaatatgtgtaatttgTATATCCTCGGTGAAAAGGACTGATAATgTTTGGAACTGTGGGGGATGCTTTTCCATATTTCATTTGATGTGCATTCAACGTTGGTCGAAAGATAAGGTTGTACAAATAAAGCAATCATTAAGTGAAGGAATTCCTGCTAAAAGAAATCTTAAAGTAGTTTGGGATTGTCCCAAATGCAGGCAACATTATGATCCATCTGATATTCCTGATAAATACTTGTGTTTCtgtaaaaaaacagaaaatccCTCTTTTCAACCTTTGTTGGTACCTCATTCTTGCGGAGAAACTTGCCACAGAGATCTACAACCTTTTTGCGGGCATAAGTGCCTGTTACTTTGCCACCCAGAGCGACCACCTCGAACTCAAAGATGTAACAACAGAGAATGGTCGTGTGGTACACCTTGTGATAAATTACTGTCttgcaaaaatcacaaatgttCACAGCTTTGCCATGGAGATGATTGTGAACCATGCCTCAAAAAGAGCATACAGAAGTGTGTGTGCGAGGCTAAGAGTAAATTAAGGGATTGTTCTACACCAGTTTGGCAGTGCGATCAggtGTGTAACAAGTTGCTGGAATGTGCAAAACATACATGCCCGACAAGGTGTCACGTCGGTTCTTGCGATCCTTGCGCTTTATCACAACCACGTACATGTCCTTGCGGAAAAACTACATACACCCTAGAATGTACCGAAGACACCCCCACTTGTGGAGATACCTGCGAGAAATTGTTAGAATGCGGAGTACACATCTGCTTTCAACGTTGCCACAAAGACAAATGCGGAATGtGCTTGGAGGTGGTGAAGAAGACTTGCCGTTGCGGCCTACAAACCAAAGAAGTTCAATGCAAAAAAGATTATCTTTGCGAAACTAAGTGTAAGAAGCTGAAAGATTGTTATAAGCATCCGTGTAACCGAAAGtGTTGCGAAGGTAATTGTCCACCATGTGAAAAACCGTGTGGTCGCACCTTAAGTTGCGGAAATCACAAATGCAGTTCCGTTTGTCACCGAGGCCCGTGTTATCCATGCTATTTAACTGAAACGGTTTCTTGCAGATGCGGAGGTACTAGTCTTACAGTGCCTTGTGGTAGGAAGAAAAAAACTAGACCACCGCGATGCCTACTTCCATGCAAAATTCGCCCCAACTGCCACCACGAGAAGCGAGAAAAGCACAACTGCCACTTTAATAGTTGCCCACCTTGTCGtcaaatttgtaacaaaaatttaacgtcGTGTAAACATAAGTGCCCGGTCGCGTGCCATTCAGCCGCCTTAGTTATGATTGAAGGTCAAAAAGGATCGATGCCTTGGGAACAAATTGAGCCCCAACTGGTGCAAAAGTCCCTTCCTTGTCCAGATTGCGTCGTACTTGTACCCGTAACTTGCTTAGGAAATCACGAAACGGCCGATTGGCCTTGTTTCCTTGCGAAAACGTCGAGTTGCGGGAGACGTTGTGGAAGAAAGTTGCAATGCGGTAATCACGATTGTTCCAGAGATTGTCACGTTGTCGAAGATGCCAAGGACGAAGTAACGGCTGGAatcaactgtttaaaatgcGAAAACCCGTGTTCGAAACCAAGACCAGTGGGCTGTTCTCATTTGTGTCCAAATCCTTGTCATCCCGGCGATTGTCCACCATGTAAACAAATGTTGCGCATCAAGTGTTTGTGCGGACTGAATCAACCGTACGTATTATGCAGCGCTTGGACGTCTACTACTAACAAAGAAGAATTGGAAAGTTGCGGAAATCAGTGTCCCAAAAACTACCCTTGCGGACATCGGTGTCGTTCGAACTGCCACGCCGGGGAATGTCAGAATCCTGAACTTTGTAAAAAACGAGTTAAAGTCACCTGCAGCTGCAAACGCATTAAAAGGGAATTTTCTTGCGAAGAAGTTCGTTCCACCGTTGTTATCGTGAAATGCGACGAGGTGTGTCAGGAAAAgcaaagagaagagaaaaaagcGAGAGATTtggaaaatgaaagaaaacgtAAGGAagaggaattaaaaaataaaatcgaattgGAAAAGTACGAAAAGATGTTTCACGGCAAGAAGAAGTCTAAAGATCGGAGAGTTATTAACGAAACCGAAGAAGTATCTTTGTTAAGAAAGTATTGGATGGTTGCGGTTTCATTAGTAGTTCTGGTAGTTggtgtttattttatgttttttgtttga
- Protein Sequence
- MHEVHNKLQEAVRKHTKDFDSSSEEEELLIDDIIETTFKSYAQSGGTNENLNRANVFLTDTATSGVKICVICISSVKRTDNVWNCGGCFSIFHLMCIQRWSKDKVVQIKQSLSEGIPAKRNLKVVWDCPKCRQHYDPSDIPDKYLCFCKKTENPSFQPLLVPHSCGETCHRDLQPFCGHKCLLLCHPERPPRTQRCNNREWSCGTPCDKLLSCKNHKCSQLCHGDDCEPCLKKSIQKCVCEAKSKLRDCSTPVWQCDQVCNKLLECAKHTCPTRCHVGSCDPCALSQPRTCPCGKTTYTLECTEDTPTCGDTCEKLLECGVHICFQRCHKDKCGMCLEVVKKTCRCGLQTKEVQCKKDYLCETKCKKLKDCYKHPCNRKCCEGNCPPCEKPCGRTLSCGNHKCSSVCHRGPCYPCYLTETVSCRCGGTSLTVPCGRKKKTRPPRCLLPCKIRPNCHHEKREKHNCHFNSCPPCRQICNKNLTSCKHKCPVACHSAALVMIEGQKGSMPWEQIEPQLVQKSLPCPDCVVLVPVTCLGNHETADWPCFLAKTSSCGRRCGRKLQCGNHDCSRDCHVVEDAKDEVTAGINCLKCENPCSKPRPVGCSHLCPNPCHPGDCPPCKQMLRIKCLCGLNQPYVLCSAWTSTTNKEELESCGNQCPKNYPCGHRCRSNCHAGECQNPELCKKRVKVTCSCKRIKREFSCEEVRSTVVIVKCDEVCQEKQREEKKARDLENERKRKEEELKNKIELEKYEKMFHGKKKSKDRRVINETEEVSLLRKYWMVAVSLVVLVVGVYFMFFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00004357;
- 90% Identity
- -
- 80% Identity
- -