Acer085190.2
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- -
- Assembly
- GCA_030710515.1
- Location
- JALBCR010003496.1:113091-114615[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-13 9.5e-11 43.6 0.0 1 38 11 48 11 55 0.90
Sequence Information
- Coding Sequence
- ATGCCACCAAAATTAAAGCGAGCTTCATGGACTCCTGAGCAGTTGAAAGCTGCAATTAACGCAATAAACGCCGGAGAAATGTCTCAAAGAGAAGCTGCTCAACGATTTAATGTACCCAGAAGAACTCTAAGGAATCACCTGGCTTCTGGAATTATGGATAAAAAATTGGGCGATCCAATAGGAATGCCTCTAACACCAATGCTGGTACGTCGCTCTGCGTTCAAATTCTGTCGTGAAAACAACATCCAAAATCCATTCAATGCTGCAAAGGAAATCGCTGGAAAGGATTGGCTATATGGGTTCTTGAAACGAAATCCCGTCTTGGCGCGTCGCAAGGCTCAGCTAATGAATCCAGCTCGtgctcaaaaattgaataaattcatAGTCGGAGATCACTTTGATAAGCTGGCCCAAATCTTTGAGGAAATGGATTTACATAAGAAcccacaaaatattttcaatatggacGAAAAGGGACGTATCCACTTAGTTGCACCTGAACATGCTGAAAATGTGACAATCGCTGGCTGCTGCAATGCTCTTGGAAATAGTATCCCACCTATGGTCCTATTCAAAGGAAAGCGCTTGAAACCCGAATGGACAGATAACCTACCAGCAGGTACCTTGGTCAGAATGGCTGACAAAGGAAGCATGACAAATCAACTCTTCATTGAATTTCTAACGCATCTACATCGCTACAAGGGTCCAAATAAAATCCTGCTTATTTTTGATGGTGCTGCTTGCCATTTGGATATTTCCATCGTCACGGTTGCAGAAGATCTAAATATAAGGCTATACTGCTTACCCTCTAATACAACACATGAACTTCAACCGTTGGACAAAGCTGTCTACAGGTCTTTCGAACATCACTGGGACCAAGAACTTCTCAGGTATTGGGATGCACACCCTGATCGTAAACTGAACAAACATCGCTTTGGCAAAATTTTCTCTAGAGTTTGGCCGAAATGTATGAcaccagaaaatattttgagcgGCTTCCAAGCAACAGGCATATATCCACTTGATCGTACTGTTATCCCAGAATCAGCTTTCGCACCTTCGCTAGCAACCGAACGTCCTTTCGCAATGGAACCATTGGAGACCGAAGAGAATGACGGCATTAGGCGCAATAATGGAAACGACCATCCTATTGATCTCCATGATTGCGATTCAAACGACTCAGCAGATGATGTACCATTGAGTGCACTGAGTAATATTCTGAAGAATGCTGCCTATGAAAAAGTTTCTGATAAGATTGGAAATCGTTCTGAAGCACCTGTTCATGGGCAAACACAGACAAAAGATGAAGATCTCAATACTTCGTTTAAAGAGCTGCTTCCCACCCCAGAATTGCACAAATTTAAAGGGAAAACTCAAAGAGAAAGTCTCTCAATTACAAGGCTCAGATCGTAA
- Protein Sequence
- MPPKLKRASWTPEQLKAAINAINAGEMSQREAAQRFNVPRRTLRNHLASGIMDKKLGDPIGMPLTPMLVRRSAFKFCRENNIQNPFNAAKEIAGKDWLYGFLKRNPVLARRKAQLMNPARAQKLNKFIVGDHFDKLAQIFEEMDLHKNPQNIFNMDEKGRIHLVAPEHAENVTIAGCCNALGNSIPPMVLFKGKRLKPEWTDNLPAGTLVRMADKGSMTNQLFIEFLTHLHRYKGPNKILLIFDGAACHLDISIVTVAEDLNIRLYCLPSNTTHELQPLDKAVYRSFEHHWDQELLRYWDAHPDRKLNKHRFGKIFSRVWPKCMTPENILSGFQATGIYPLDRTVIPESAFAPSLATERPFAMEPLETEENDGIRRNNGNDHPIDLHDCDSNDSADDVPLSALSNILKNAAYEKVSDKIGNRSEAPVHGQTQTKDEDLNTSFKELLPTPELHKFKGKTQRESLSITRLRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00001890;
- 90% Identity
- iTF_00001870;
- 80% Identity
- -