Atri016009.1
Basic Information
- Insect
- Abrostola triplasia
- Gene Symbol
- -
- Assembly
- GCA_946251925.1
- Location
- CAMIUJ010000073.1:1262216-1264555[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00093 1.4 9.1 0.6 18 43 9 31 5 32 0.93 2 19 0.0011 1.6 9.0 0.2 18 43 68 90 63 93 0.74 3 19 5.2e-06 0.0079 16.3 2.2 11 43 94 121 90 122 0.88 4 19 0.0022 3.4 7.9 0.4 18 44 129 152 127 152 0.93 5 19 0.00025 0.38 10.9 2.5 15 43 155 180 153 181 0.90 6 19 0.0019 2.9 8.1 0.5 17 44 186 210 182 210 0.89 7 19 0.0033 5.1 7.3 0.1 18 44 218 241 212 241 0.92 8 19 0.19 3e+02 1.7 0.0 19 43 257 278 250 279 0.84 9 19 1.5 2.2e+03 -1.1 0.2 34 43 317 326 298 327 0.75 10 19 4.7 7.2e+03 -2.7 0.2 18 26 334 342 331 346 0.79 11 19 0.41 6.2e+02 0.7 0.1 15 27 360 372 354 386 0.79 12 19 1.3 2e+03 -1.0 0.8 19 43 409 430 406 431 0.70 13 19 0.026 39 4.5 6.8 5 29 424 448 419 461 0.70 14 19 0.00097 1.5 9.1 2.5 8 43 456 488 451 489 0.79 15 19 0.034 52 4.1 0.8 17 44 494 518 490 518 0.85 16 19 0.27 4.1e+02 1.2 0.8 18 28 525 535 521 547 0.84 17 19 2.6 4e+03 -1.9 0.1 35 43 569 577 556 578 0.80 18 19 4e-05 0.06 13.5 2.4 6 44 607 644 605 644 0.80 19 19 6.4 9.8e+03 -3.2 0.1 14 27 660 673 656 675 0.80
Sequence Information
- Coding Sequence
- ATGTACCTAAACCAGCTAGATTTTGTCTGCGACTACTGCTCAAGAACGTTCACGAGGAAGTACAACCTTCAGACACATATAGAGAACTGCCATGTTAACTCCTCAAGCCACTGCGATGTCTGCGGCCAGACCTTCGGCAGTCCAGCCGGAGTGCAGCAGCATTTGCTCAGAGGCCATAACAGTTATGGCCAGTCGTTCCCCGAGTGCGACATCTGCGGCCGAATTTTCACCAGGAAACAGAACATCACTGCTCACATGCTTTCTGTACACCTGCAGGTACCCAACTATTCTGTACTCTGTAAGTTTTGCGATAAGAAATTCTCCTCTATAAAGAATTTGAAGCGACATATGAATATGCTACACAATCCCGATGTGGAGTATCCGACTTGTAATGATTGTAATAAAGTGTTTAAAAGCAAGCAGTCGCTTATAACACACATTCAGCAAACACATAAACTAGCTACAGTAATAAAGTGTCATTTATGTGAGAGAGTGTACACAAACAATAGAAATTTGAAGCGGCATATTGAGATGTATCATGGAGAGAAAAGCGAGTTCCGATGCGATATTTGTCCGAAAGTCTACACGTCCAACCAGAGTTTGCGACGCCACGCCCGTACAAGACACAGCACGGACAACCAGGAGCAGTTCTCGTGCAATTTTTGTTTAAAACTTATCGTTGGAAGGGAGAATTTCGAGTCCCATTTGCAGTCATACCACCAAGAATACCAAGAAGTAGATTCGGAGGTCAAAACAGCGGAATTCTTCTGCGAATATTGTGACAAGAGTTTTGAAGAAGAACCCTCGTTGCGGCAGCATATAAAAGCAGAGCATTCGTTTAAGACGTTCTACAGGTACTGCAAGAAATATCTGCTGAAGCAGTACCGTATGGATATGAAGCAGATTTACCATTGCGAGTTCTGCAGTACACCGTTTCCCACAGTCTATGAACTGAAGAATCATATGAAGATGAATCACGACACAGAGTACTCTTTATCTACTTGCAATGTGTGTTTCAATAAGTTCTACAGTAAGGAAGCCATTGTGGCACATAAACAGGTCTGCATACCCCCCCGAGACGTTAACTCCTGCAGCCATTGCGATAAACTGTTCACTGATATCTCCAGCCTAGAATTCCATACGAGGATATTTCATCCCCAAGCTCAGATCGCCGATTCTAACATAACATCCACGAACATAGATGATGAAACTCTCGCGTTCAAATGTGAGAGCTGCGACCGGCTCTATTATAGCGATAGGTCGCTCAAACATCATATAAAGTTGAAGCATACGACGGACGAGGCGGTGGAGTGCCAGATTTGTGGCAAAATTTGCAGCAACAAATATTATCTAGCTTCCCATATCAAGATCGTCCATAATACGGACTCCTGGTCGCAATGCGAGTACTGCGATAAGCAGTTCAAGTCGAAAAGGAATATACGGAGGCATATTGAGTATACGCATTTGGGCATGCAACGGTATAAGTGCATTGAGTGTGAGACGTTGTTCAAAGAGAAAAGGAGTCTTCGGAAGCATGTGAGGACGAAGCACCCAAACTCGACGGCTTTTCCCCAATGCCATATTTGTCACAAGCGCTTTGAGTCAGCCAAGTCTTGTAAAATCCATTTAAAATTGCTCCACTCCTTCAATATGAACACTTTTCCGTGCGATTTGTGCTCAGTATCCTTCCAATCCAATGAAGCACTCACCATACACTTAGAGACAAAACATTTGGCTGAAGACGAGATCTACAAGTGTGAGGAGTGCAATCTCGTATTTAAGGGTCAGGAAAAGTTTGACAGCCACAACGAGGTTTGCCACGTGAATTTGGTCCCTAATATCAAGCAGAAAGTGCTACCTCGATGTATATTGTGTATGAAAGACTTTAGCACTCGGAAAACATTGAAACGACATATCAAGAAGTTCCATCAAGATTTCGATGTCGACGACCTGGCGACATTCGGATCACGACACAGAGAGTTCACAGTCGATTGTGACGAGTGCCTCAAAAATATTAATGACGAATTCTATATAAATATCTACCAGAAGTTAAAACACTTAAGGGATTCAATCGTTTTCAAGTGCGAGACGTGTTTAAGTTCGTACAACTCGCTCGAATTTGCTATACAGCGGTATAAGGTTAGTGATGTCGGTGCTTATAAAAGCAAGATGATACTTAGTGAGCTCTGTACTGCGGAGATGAGCGAGGAAGAAGCTGATTTCTCTGGTTTCGGAGCGTTACACGACATGTTGCCAGAGAGCACGACCAATGACATCAAATTGGAGCTGTTTGATGAGTGTTTAGAGTCTGATATCAAAATGGAGCCTCCGTCGCCTTGA
- Protein Sequence
- MYLNQLDFVCDYCSRTFTRKYNLQTHIENCHVNSSSHCDVCGQTFGSPAGVQQHLLRGHNSYGQSFPECDICGRIFTRKQNITAHMLSVHLQVPNYSVLCKFCDKKFSSIKNLKRHMNMLHNPDVEYPTCNDCNKVFKSKQSLITHIQQTHKLATVIKCHLCERVYTNNRNLKRHIEMYHGEKSEFRCDICPKVYTSNQSLRRHARTRHSTDNQEQFSCNFCLKLIVGRENFESHLQSYHQEYQEVDSEVKTAEFFCEYCDKSFEEEPSLRQHIKAEHSFKTFYRYCKKYLLKQYRMDMKQIYHCEFCSTPFPTVYELKNHMKMNHDTEYSLSTCNVCFNKFYSKEAIVAHKQVCIPPRDVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNIDDETLAFKCESCDRLYYSDRSLKHHIKLKHTTDEAVECQICGKICSNKYYLASHIKIVHNTDSWSQCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFQSNEALTIHLETKHLAEDEIYKCEECNLVFKGQEKFDSHNEVCHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHQDFDVDDLATFGSRHREFTVDCDECLKNINDEFYINIYQKLKHLRDSIVFKCETCLSSYNSLEFAIQRYKVSDVGAYKSKMILSELCTAEMSEEEADFSGFGALHDMLPESTTNDIKLELFDECLESDIKMEPPSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00000536;
- 90% Identity
- iTF_00000536;
- 80% Identity
- iTF_00001353;