Atri011218.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Abrostola tripartita
Gene Symbol
nfxl1
Assembly
GCA_905340225.1
Location
HG996509.1:9096779-9099253[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 2.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.014 1.6e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 17 3.1e-07 0.0035 17.6 15.9 3 19 187 203 186 203 0.95
4 17 2 2.2e+04 -5.5 1.2 6 10 228 232 228 232 0.69
5 17 1.9e-07 0.0021 18.3 13.5 3 19 240 256 238 256 0.92
6 17 2 2.2e+04 -4.8 1.7 6 10 281 285 280 285 0.85
7 17 2.8e-10 3.1e-06 27.4 14.5 1 19 291 309 291 309 0.99
8 17 9e-06 0.1 13.0 19.2 3 19 346 362 338 362 0.86
9 17 0.00033 3.7 8.0 20.3 1 18 396 413 396 414 0.97
10 17 4.5e-10 5e-06 26.7 14.0 1 19 423 441 423 441 0.99
11 17 0.00038 4.3 7.8 8.1 9 19 489 499 487 499 0.90
12 17 0.0083 93 3.5 6.5 2 12 510 519 509 519 0.87
13 17 0.35 3.9e+03 -1.7 3.6 14 18 548 552 548 553 0.87
14 17 9.1e-06 0.1 13.0 5.3 1 11 589 599 589 600 0.97
15 17 2 2.2e+04 -7.4 4.2 6 10 617 621 614 621 0.66
16 17 4.9e-05 0.55 10.6 14.7 3 18 630 646 629 647 0.86
17 17 3e-06 0.033 14.5 12.1 1 18 688 706 688 707 0.87

Sequence Information

Coding Sequence
ATGGCGCGTAGATACAAAGACGCTGCTGCAAAGCTGCAGCTAAATGTTCAGAAACATTTAAAAGATATGAAAGAGCTTTCATCTTCTGAAGACGAGGAGCCCTGCGAGTCCAGCGTCTTGGAGGGAGTGTTCCAGAGTTACTGGCGGGGCGGGGGAGACACAAATATGCTAAATAGGACCAAAAATCTTCTAGAAGAGGCGATAAGTGGCCGCTCTGTGACATGTCTAATATGCATTGGATCCATCAAAAGAACTCACGCTATATGGACTTGTGAACACTGTTACTCTTACTTTCATTTATCGTGTATTCAAAAATGGTCACAGGATAGTATAAGTTTACGTAGCGAGGAAAGTCAGGGCCCAATTACTGTATTCAAACAACAAAAAATTGAATGGTGCTGTCCTAAGTGCCGGCACTCGTATACCAAAGAAGAAGTACCGCGGAAATATCGTTGCTTCTGTGGCAAAACTGATGACCCACAATACCATCCATGGCTCATCCCTCATACTTGTGGAGAAGTTTGTGAGAAAAGACTGTCAGTTGATAATGACAACTGTAAACATAAATGTTTGCTGCTGTGTCACCCCGGGCCGTGCCCGCCTTGCCCTCAGACTGTTAATGGAATATGTTTTTGTGAGAAAGAACGGAAAAGAGTGAGATGCAGCGCTGCCAAATGGTCCTGTGGCCAACTGTGCAAGAAATCTCTTCTATGTAAGACTCACAAATGCGGAAATGTATGTCATGCAGGTGACTGTCCTCCATGCAGCTACACTAGTGTTCAGCCGTGCCAATGTGGTAATGAGAAAGCTAAAAGACCATGCAACAATCTTTTCTGGCAGTGTGAGAAGTCATGTGATAAGCTATTCTCATGTGGTTACCATAAATGTGAGAAAATCTGTCATTCAGGTAACTGTGGGCCGTGTCCCAACTCTGGAATGACATCATGCCCTTGTGGGGCCAACCAACGCTATGTACAATGTCCAGATGTTATGGAGACCTGTTTAGGTACGTGTGGTAAGAGGCATGAAGATTGTGAACATAACTGTCCAGAAAAATGCCATAAAGGGAAGTGCCCGCCTTGCCAAGTCTTGATTCAGAAGAAATGCCTGTGCTCAACACACACTAGGTCTTTGCCTTGTAGTAAGGAATTTAAATGTGATACAAAATGTAGAGGAATAAGGCTTTGTGGTAAACACGGGTGTGGGCGAAAATGCTGCAATGGAACTTGCCCCCCATGTGAAAAAATTTGTGATAAAGCCCTACAGTGCGGTAGACACAAATGCACAAATATATGCCATCGTGGACCATGCTACCCATGCCCCAGAGAATCTAAAGTTAGTTGTAGATGCAAAGAGACATACATAACAGTACCGTGTGGTAGGGAGCGACAAACCAAACCTCCCAAATGCAACTTGCCATGCAAAATTAAATACAAATGTGGCCACAGTGAGGATAATAAGCACCCCTGTCATTTTGGTGAGTGTCCACCATGCAAAGCTATTTGTTACAAGCCGTATCCCAAGTGTGCCCACCAGTGTAAAGCAGTGTGCCATGAATATGTTGCTGTACTCTTTAAACAAGTAGAAAAACCCGCTACTCCATGGGAAGTACAACCGCCAAAAACTAAGATTATGACTTTAGATTGTCCACCATGTGACAGTCCAATACCAATTGTTTGTTTCGGTGAACATGAGACAGACAATCAGCCATGCAGTTCAGCTGCTCGCAGGCCCTGCGGGAGAGAATGTGGACAGCCTTTGTCTTGTGGCAATCACAAGTGCACCTTACTTTGCCATCTTTATAGCCCAAATTCTGAGTATCCTAATGTGCCTTCTAGTTGCAAGCAATGTGAAAGAGAATGTTTAGTTTCTCGTCCTGAAAAATGCACCCACAAATGTTCGATTCGGGCCTGCCATCCAGGCCCATGCCCTCCGTGTGAGATACTGGAACGCTTAGCCTGTCACTGTGGAATCACAGAGATTTATTTGCGATGCCGGGAAATATCTAAAGCAACAGAGGAGATGCTATCATGCAAGCAACAATGTCCAAAAAACTTAGAATGTGGTCACCGCTGCCGCAACACGTGTCATACGGGACCTTGCAACAACCAAGTGTGTACTAAAAAAACTAAGGTTCACTGCCCTTGTGGTAACATAAAAAAGGAAGCCCCCTGCAACTCTGTTAGACAAGGGAGTACCAAAATACTGTGTGATGAAAGCTGTGAAGCTAAAAAAATAGCTATGAGGATAGATAGTGAGAAAGAAAAGCAGAGATTGAAGGAGTTAGAGGAGGAGAAGAATCGTAAAGAGTTGGCAGAGTATGAGTGGAAACTGAGCGGTAAGAAGAAGAAGTATAAGGAGAAGAAATCAGTAGTAAATCAGGATGACAGAGGTTTGTTGCAGAAGTATTGGGTACCAATAACATCATTTCTGATTATGATAATAGCTACATTTTATTATATATTCTATGTGTAA
Protein Sequence
MARRYKDAAAKLQLNVQKHLKDMKELSSSEDEEPCESSVLEGVFQSYWRGGGDTNMLNRTKNLLEEAISGRSVTCLICIGSIKRTHAIWTCEHCYSYFHLSCIQKWSQDSISLRSEESQGPITVFKQQKIEWCCPKCRHSYTKEEVPRKYRCFCGKTDDPQYHPWLIPHTCGEVCEKRLSVDNDNCKHKCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQLCKKSLLCKTHKCGNVCHAGDCPPCSYTSVQPCQCGNEKAKRPCNNLFWQCEKSCDKLFSCGYHKCEKICHSGNCGPCPNSGMTSCPCGANQRYVQCPDVMETCLGTCGKRHEDCEHNCPEKCHKGKCPPCQVLIQKKCLCSTHTRSLPCSKEFKCDTKCRGIRLCGKHGCGRKCCNGTCPPCEKICDKALQCGRHKCTNICHRGPCYPCPRESKVSCRCKETYITVPCGRERQTKPPKCNLPCKIKYKCGHSEDNKHPCHFGECPPCKAICYKPYPKCAHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDSPIPIVCFGEHETDNQPCSSAARRPCGRECGQPLSCGNHKCTLLCHLYSPNSEYPNVPSSCKQCERECLVSRPEKCTHKCSIRACHPGPCPPCEILERLACHCGITEIYLRCREISKATEEMLSCKQQCPKNLECGHRCRNTCHTGPCNNQVCTKKTKVHCPCGNIKKEAPCNSVRQGSTKILCDESCEAKKIAMRIDSEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKSVVNQDDRGLLQKYWVPITSFLIMIIATFYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00001679;
80% Identity
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