Basic Information

Insect: Abrostola tripartita
Gene Symbol: -
Assembly: GCA_905340225.1
Location: HG996514.1:2077641-2098944[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.15 11 7.0 0.1 2 23 494 515 493 515 0.95

2 18 0.0071 0.52 11.2 0.0 1 23 525 548 525 548 0.95

3 18 0.24 17 6.4 1.9 1 21 670 690 670 691 0.94

4 18 0.039 2.8 8.9 3.8 2 23 754 775 753 775 0.95

5 18 0.75 55 4.8 0.6 1 23 787 811 787 811 0.90

6 18 0.00014 0.01 16.5 0.3 2 23 818 841 817 841 0.97

7 18 0.076 5.6 8.0 0.2 1 23 847 869 847 869 0.93

8 18 0.0037 0.27 12.1 2.9 1 23 875 897 875 897 0.98

9 18 4.9 3.6e+02 2.3 0.1 2 20 908 926 908 928 0.89

10 18 0.15 11 7.1 0.1 1 23 1007 1029 1007 1029 0.97

11 18 2.2 1.6e+02 3.3 7.2 1 23 1036 1058 1036 1058 0.95

12 18 0.0015 0.11 13.3 1.8 1 23 1100 1123 1100 1123 0.95

13 18 0.00025 0.018 15.8 0.7 1 23 1130 1153 1130 1153 0.98

14 18 0.0042 0.31 11.9 0.2 2 23 1175 1197 1174 1197 0.96

15 18 0.007 0.51 11.2 4.2 3 23 1219 1240 1218 1240 0.95

16 18 0.00033 0.024 15.4 1.2 1 23 1304 1326 1304 1326 0.96

17 18 0.00013 0.0097 16.6 0.1 1 23 1332 1354 1332 1354 0.97

18 18 0.00042 0.031 15.1 0.7 3 23 1362 1383 1360 1383 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.15	11	7.0	0.1	2	23	494	515	493	515	0.95
2	18	0.0071	0.52	11.2	0.0	1	23	525	548	525	548	0.95
3	18	0.24	17	6.4	1.9	1	21	670	690	670	691	0.94
4	18	0.039	2.8	8.9	3.8	2	23	754	775	753	775	0.95
5	18	0.75	55	4.8	0.6	1	23	787	811	787	811	0.90
6	18	0.00014	0.01	16.5	0.3	2	23	818	841	817	841	0.97
7	18	0.076	5.6	8.0	0.2	1	23	847	869	847	869	0.93
8	18	0.0037	0.27	12.1	2.9	1	23	875	897	875	897	0.98
9	18	4.9	3.6e+02	2.3	0.1	2	20	908	926	908	928	0.89
10	18	0.15	11	7.1	0.1	1	23	1007	1029	1007	1029	0.97
11	18	2.2	1.6e+02	3.3	7.2	1	23	1036	1058	1036	1058	0.95
12	18	0.0015	0.11	13.3	1.8	1	23	1100	1123	1100	1123	0.95
13	18	0.00025	0.018	15.8	0.7	1	23	1130	1153	1130	1153	0.98
14	18	0.0042	0.31	11.9	0.2	2	23	1175	1197	1174	1197	0.96
15	18	0.007	0.51	11.2	4.2	3	23	1219	1240	1218	1240	0.95
16	18	0.00033	0.024	15.4	1.2	1	23	1304	1326	1304	1326	0.96
17	18	0.00013	0.0097	16.6	0.1	1	23	1332	1354	1332	1354	0.97
18	18	0.00042	0.031	15.1	0.7	3	23	1362	1383	1360	1383	0.95

Sequence Information

Coding Sequence: ATGACGGAGACGCAGCCCCCATTGATCCTGTGCATGGATAATGCTGCGGGAGAAGATGTGGCTCTCAAAATAGAGCCGGAAGATAGCTTTCAGACATTTCTGGATAAAGCTAAGTCACTGCTAGGGTTCGATGTAGATATAAACTCCATAACCAGGAACCAGCCAGTCTCACTATCAGAGAATGTTTACCAATTCCTCATCAACGCCGAACAAAACCTCCAGACAGATGATCTAACACAAAACTTTGACCAAATGTTGGACACCAACGATGGAGCCAATGATTTGGTCTATATTTTAGATGACGGCACTCAAATTAGAGCTTCCCAAATACATTTTGATAATGACGATCCGCTGATCGATCTAACGGCAGAAAAAATACCGTTTGTTAAATACGCTGATGACGTCACCGATGATATTGAAGTAGAAAATATTAATGTACAAGAAACTAAGAAGATTAATATCGTGGAGAGTCCAGTGTCCCGTTGGTCAAGCAAAAATTCTAGTCCCAAATGCAGTTTTGTGAACTCTTTACCATTTAAATTAGTATGCAATAACACGTCGGGCTTCGAAGCGCAGTTTACGAAATATTTAGAAGCCAATACGGCCAAAACGTACGCGACTTTGAACCCTGTTACAGCAAGAAATAAGTCCCCAAAAAGTTTAATTAAAGACAATTTTAAAAACTACGACGAAAGTTACCAAAGGGGCGACAACTTGTCTTACACTAGGGAGGACATTTTGAACATGTTCAAAGACTCCCCGATGACGTCATTGCCTTATGACCAGGGTTATAGCGAGAGGAGGCATGTGAGGAAGACAGACCCTTCTAGACTCGTCCATAAAAGTTGGAACAAGCCCATTTCTTACGTGGATATCGACGGGGTTTTGATCGGGGAAAGTGAAAGCCAAATATGCTTTATTTGCGGCAAACATGTCGATAACAGTGTAGATAAGCTGTATTTGTTTGATAATGAAGATCAGAGGCTGCACAGATGCTCGCCGCAGAAGAAAATGTCGACGCAACTGAAAATTATATGCGAGTGCTGTCTCAATGAGAACTTTAAGCCTTGTCGGATGAAAAGCGCCAACCAATTCCTGAACCCCGATGAGTTCCTCGTCATCAGAAACAATCAGCAATACATATTTCAGAAAGTTAAAAACTTCAGTTTCACGCATTTGGGTAAAGCTAAAGAGATCATAAACAAAATAGAGTCAAAAGTCACGGATAAGGAAGAGTTTGTTAAAGTTGAAATTGGGTCTGATGGGGAGATCATCACTAAGCCCATAGACAACGATCCGAGGTCTGACGACGTGATCATAGTTAAGGATGAGAAGAAAGACGGTAGTTCGAGCGATGTGGAAATTATAGAGCCGGAACCGGAAATAGATAATATCATAGACAATTTAGAGGAAGCTGATGAAGAAGTGAAGGAGTTTTTGGGAAAGTACCAGTGTGATAGCAGTGAGGTGACAGAGCTTAAATGCAGATTCTGCGAAAAGATATTCGCGGATCTACCAGAAGTGACGGAACATTCTGAAACCCATAAACACGATTTAGAGGACGGTGAAGTGTTTCCGTGTCCTCTCTGTAACTATGGTTATGCGAATTTAAAATGGCTAAAAGGTCATTTGAAAGCTGCCCATGAGAAGTCAGAAGTGAATGTTAAAGAAGATGATAAAGTGAAAGAAGAGAATAAAGATGACCCTCAGATATCGCCGAAATTGTCTTCACCGATTGCAAAACGTACAAGGAGCTCTAGTAAAAAGGATGGCGATAAAAAAGACAGTGAGAAGACTTCAGACGACAATAAATCAGATTTGAACACTGAAGCGCTGGAGCCACCCATCATAAAAACAGAGGTGAAGCAAGAATGTGTGGATAGCAGTGAGGACGAGATCTGGATCGTACAAACAGCTGATGCAGAAGCCACGCACGAGCTGCAGAAACTACTAGATGCTGCCAAGGTAACTGGCGAAGGAAAGGAAGGTGCTGAATCTTCAAAAACACATAAATGCTTTAATTGCAGCCAAATATTCCCAAGTGCGGAGGGTCTATCAAGCCATCGGTGTCGACGTCGCGGCAGGAAACGGAAGTCCAAAGACCTGGTCAACCTCATCTGTATACCTACTGAGGAAGACTTCTTGAAGAGAGCACAGGGACGTCCTAGACATGTCGATACGACCACAGACAACGACCTTCTAGTTATGCGCCCACGCAAGCGCCGAAGCCGGGAACCGACCTCCAACCCTCAGGTGGTAACCTGCCACAACTGCAACGAATCCTTCACCTCCAAAGTTCGACTCAAGTTCCATATGCAGTTCCATGACACAACCAACGTCCTAACTGCTGACGGCCGCTACTCCTGTTCGGAGTGTGATGGCGCGACCTTCGCTACGGAGACGGAACTCTTCGACCATGTCCACTTCCAGCACGACAAGCAGAAAAGGTGGCAGTGCCCGGTGGAGGGCTGCGGGAAGACGTTCTTCCTCAGGGCGACGTTAACCAAACACAGTCGCACGCACACAGACACGCGCCGCTACGTGTGTGTGACCTGTGGGAAGCGGTTCTTGGACAAGCAGACCCTGGACGAGCATGGGGTCACCCATCTGCAGATCAAACCGTTCCAATGCCACATCTGCCTGAAGCAGCTGACGCGCCGCTCGCGCCTGCGCATGCACGTGCGCGCGCATGAGGAGGAGCTCGCGCCGCGCCTCGTGCGCGTGTGTGCCGTGTGCGCACGCGCCTTCCGAGACCATCCACATGCACAGGAACACGCTTCGAAGTCTACGGAGTGTATAGAGGCGTTCGCCAACGAGCTGAAGGAAGAAGCAGAAGAGGTGACGGTACAGTTATCGCCCACCAGTGGCCTCGTCCGCCATACTGTGCAGATTGTTGAATCTCCTAAGCTGTCGAAGCCTATTAAGCGGCAGGTGTCGTCAGAGGTGGGCGAGCCGCTGCTGGCCCAGCTGGCTGATGAGGCGAGGGCTCTCATAAGAGTCGTGGAGATTGAGAAGGCATTCCGATGCGAGTATTGTGAAGATGTGTTCTACTTGGAGGGTGGTCTGAACACCCACCGAGCGATCCACAAGGGCGTGAAGAACCCTTTCACGTGTCACATATGCAAAGTCAGCTTCGCCACGTACTCCAGATGTACGACCCACAAGACGACGCACGGGTTCTACAAGCGCTCGCTGGCGGACGCCAAGAAGCAGGCGGGGGGCCCCCGGGAGCCCGAGCTGGCCGGGCCCGCCGCCACCGGCATCCTCGGCTACGGGGACTTCCCCGTCGTCAAGCACTTCCTGTGCGAGGACTGTGGCCGCTCGTACCTACACTGGACGTACCTCCAGGTCCATAGACGGATGAAGCATGCCAACGAAAACTTTTTATATAAGTGCAACCAGTGCGAACTCACGTTCCCCAACAGTTGGAGTCTCGCCTACCATCGTAAGAAGGTGCATGGCAAGACAGGACCTGATGACCCTGGTAGCACGAGCAAGATCATCAGGGATGATTACAGGATACCGTGTCGAGATTGTGATGAAGTTTTGCCAAACAAAACTGCTCTCTATAAGCATAGGAAGAAGGAACACAGTGACGGACCGACACGCGTCAAGAACAAACAGGGCGAAGAGTCTAGTTCTAGTGGAGGTGCCTGCTCTCGCTGCCACGCCACCTTTACGCATGCGTCAGACCTGCACAAACATGTCAAAGAGGTACACAAACAGGACGTGGATCTATCTTGTACGTCATGCTCCCTATCGCTGGACTGTCGCGGGCACACGCACGGAGCGCCCCACGCCGGGCACAACACTGGGCACAATGCCGGGCACAATACCGGGCACAACCCCGGGCACAGCACAGGGCACAATGCCGGGCACGGAGCGCGCGCGCCGTGCCCGCGCCGGCCGCACGCGTGCCCGGTGTGCGGCCACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACCGGGGAGCGGCCCTTCCCCTGTGACGTGTGCGGAGTCGCCTTCCGCAGATCGACCGCAATGCGCAATCATCGCCTGATCCACACAGGCGTGCGCGCATGGGCGTGCGGCCGCTGCCCCAAGCGCTTCCGGATCCGCTCCGACCTGCGCACGCATCTGCGGCTCAAACATCCCGCCACCATCGTCGTTGTTGAGATGGAAGGTCTGAACCCCAGCGCTGAAGAGGTGATGAAGACACTGGCGCTCCACAACGTGCCGCATGACAAGCTCATTGAGGTCACCAAGATGTCCTTCTCTAAGGGCACGTCGAGCGTGGTCCCGTGCAGTGCGCGTGCGCTGTCGGCGCTGGGCGGCGTGCGGCGCGAGCAGGTCGCGTGCGGGAAGCCCGCGCCCGCCAGGATGTGTGCGTACACAGTAACTATACCCCCCCAGGGCACGTCGAGCGTGGTCCCGTGCAGTGCGCGTGCGCTGTCGGCGCTGGGCGGCGTGCGGCGCGAGCAGGTCGCGTGCGGGAAGCCCGCGCCCGCCAGGATGTTGGAGGAGTTCCAGCCGGCGCGGCGCGGGCGCGGCATCGCCAAGAACCCGCGCAGACCCAAGATATTACAGCGAGGGGGGACCAACAGCAATGATGCCTCTGCCTACCCCATCGCCGTTAGCGTTACAGGCGAGGAACTGTCGGACCTGAACGTGCAGCTCTTGCTTCGAGACGGAGTCCTGGTGAACGGAAACCAGATGGTGCAGCTGCAGCTGGACGATCCCATGCTGCTGCAGTGA
Protein Sequence: MTETQPPLILCMDNAAGEDVALKIEPEDSFQTFLDKAKSLLGFDVDINSITRNQPVSLSENVYQFLINAEQNLQTDDLTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVTDDIEVENINVQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTAKTYATLNPVTARNKSPKSLIKDNFKNYDESYQRGDNLSYTREDILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPISYVDIDGVLIGESESQICFICGKHVDNSVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFSFTHLGKAKEIINKIESKVTDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIIVKDEKKDGSSSDVEIIEPEPEIDNIIDNLEEADEEVKEFLGKYQCDSSEVTELKCRFCEKIFADLPEVTEHSETHKHDLEDGEVFPCPLCNYGYANLKWLKGHLKAAHEKSEVNVKEDDKVKEENKDDPQISPKLSSPIAKRTRSSSKKDGDKKDSEKTSDDNKSDLNTEALEPPIIKTEVKQECVDSSEDEIWIVQTADAEATHELQKLLDAAKVTGEGKEGAESSKTHKCFNCSQIFPSAEGLSSHRCRRRGRKRKSKDLVNLICIPTEEDFLKRAQGRPRHVDTTTDNDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHDTTNVLTADGRYSCSECDGATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCARAFRDHPHAQEHASKSTECIEAFANELKEEAEEVTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSSEVGEPLLAQLADEARALIRVVEIEKAFRCEYCEDVFYLEGGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQAGGPREPELAGPAATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGSTSKIIRDDYRIPCRDCDEVLPNKTALYKHRKKEHSDGPTRVKNKQGEESSSSGGACSRCHATFTHASDLHKHVKEVHKQDVDLSCTSCSLSLDCRGHTHGAPHAGHNTGHNAGHNTGHNPGHSTGHNAGHGARAPCPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSAEEVMKTLALHNVPHDKLIEVTKMSFSKGTSSVVPCSARALSALGGVRREQVACGKPAPARMCAYTVTIPPQGTSSVVPCSARALSALGGVRREQVACGKPAPARMLEEFQPARRGRGIAKNPRRPKILQRGGTNSNDASAYPIAVSVTGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_00001397;
80% Identity: -