Zqui017361.1
Basic Information
- Insect
- Zygothrica quintamaculata
- Gene Symbol
- NFX1
- Assembly
- GCA_037044455.1
- Location
- JBAMBS010002159.1:1-1490[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.2e-08 6.6e-05 23.1 13.1 1 19 3 21 3 21 0.94 2 9 3.5 1.9e+04 -3.9 0.9 9 11 58 60 57 62 0.78 3 9 3.9e-05 0.22 11.9 7.5 9 19 66 76 64 76 0.89 4 9 0.18 9.9e+02 0.2 4.8 4 11 90 97 88 98 0.85 5 9 1.2 6.5e+03 -2.4 1.0 6 10 154 158 153 158 0.83 6 9 1.8e-06 0.01 16.2 5.0 1 11 164 174 164 175 0.96 7 9 2.9 1.6e+04 -3.7 0.7 5 10 190 195 190 195 0.79 8 9 0.0016 8.9 6.7 12.3 4 19 205 220 203 220 0.93 9 9 1.5e-06 0.0084 16.4 9.7 1 16 271 285 271 291 0.92
Sequence Information
- Coding Sequence
- CTTAGCTGCAACAAGCATAAATGCCAATCGGTTTGCCATAATGGACCCTGTTATCCCTGTAAATTGGAATCCCAAGTTAATTGTCGCTGCGGCAAGACGCGACGCAGTGTGCCCTGCGGCAGAGAAAGAACTGCACGAATTGCCTGTCTGGAGCTGTGCAGAATCTCGGCGAAATGTCATCATAGCATTAAACATCGTTGCCATAAAGGTGAGTGCCCTCCATGCACTCAACCTTGCGGCTTAATTAATGATACCAGCGGCTGTGCACATATTTGCAAGGCACGTTGTCATGCAGCCATACGTGTCTCCAAACCGTCGGACGCAGCAGCACGTACAAATTCCCAAAagtaTGAATATCGTGCAGTCCCGCATCCGCGCTGTGAAGAGGGTGTTAATGTCGTTTGCATTGGTGGTCACAAGGAGGAGACTTGGCCGTGTTGGAACTCAAAGCCCACATCATGCCAACGCAGCTGTGCACGTCATTTAAAATGTGGCAATCATACTTGCAGTCTGGTCTGTCATGCTGTACCTAATCTGCAGGATATGCAACAGCAGACTGGTTGTGCCAATTGTGAACAAGGCTGCGTTGTGCCACGTCCCTCAGGATGTGTTCATGCGTGTGCCAGAGGTTGTCATCCTGCACCCTGTGCACCATGCAGCTTTATTATCAAAACGAAATGTCATTGTAATCTCAATCAGATTGTCTATAAGTGCTGTGAATTCTTCAGTGAACACGGCACTCAGCACGAGATTGAAGAGCGACGTGAAAAGCTGCGTAGCTGCGGTAATCGTTGCTTACAAAATTTTGCTTGCGGTCATCGCTGCATGACCATCTGCCACTCTGGAAAGTGTCCAATGCCTGAGCTATGCCGAAAAAAGGTTCGAATTTTTTGTTCCTGCAAGCGCATTAAATTGGAGGTATCCTGTGATAAGCATCGTGCTGGACAAATATCATTAGATTGCGATGATAATTGTCAGGCTGAGCTCTCAAAGGCAAAGGAAacacaacagcatcaactaAAAGAATCCCTTAGACAGCAGGAGGAAAAGAATCGTTTGGAGTTAGAAAAGTTTGAGCAAAAGTTTGGCAAACGTAAGCCAAAGGAGCGCAAAATTGTTGACATTAAACCAACCAAATCCGATATAAATTGGCAACGTATTGCCATCTATGCTCTATCCTTGTTGGCAGTCTTTGGAGCACTTGCTGTGGCCTACTATGCTGACaactaa
- Protein Sequence
- LSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGRERTARIACLELCRISAKCHHSIKHRCHKGECPPCTQPCGLINDTSGCAHICKARCHAAIRVSKPSDAAARTNSQKYEYRAVPHPRCEEGVNVVCIGGHKEETWPCWNSKPTSCQRSCARHLKCGNHTCSLVCHAVPNLQDMQQQTGCANCEQGCVVPRPSGCVHACARGCHPAPCAPCSFIIKTKCHCNLNQIVYKCCEFFSEHGTQHEIEERREKLRSCGNRCLQNFACGHRCMTICHSGKCPMPELCRKKVRIFCSCKRIKLEVSCDKHRAGQISLDCDDNCQAELSKAKETQQHQLKESLRQQEEKNRLELEKFEQKFGKRKPKERKIVDIKPTKSDINWQRIAIYALSLLAVFGALAVAYYADN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -