Basic Information

Insect: Zygothrica quintamaculata
Gene Symbol: -
Assembly: GCA_037044455.1
Location: JBAMBS010001283.1:139795-147826[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.19 16 6.5 2.7 1 23 1403 1426 1403 1426 0.96

2 8 1.9 1.6e+02 3.3 1.4 1 23 1431 1454 1431 1454 0.96

3 8 0.013 1.1 10.1 0.8 3 23 1645 1666 1643 1666 0.89

4 8 0.019 1.6 9.6 0.3 2 23 1675 1696 1674 1696 0.96

5 8 0.11 9.3 7.2 0.7 1 23 1703 1726 1703 1726 0.96

6 8 7.8e-05 0.0067 17.1 1.5 1 23 1732 1754 1732 1754 0.97

7 8 5.6e-06 0.00048 20.7 1.2 1 23 1759 1781 1759 1781 0.99

8 8 0.011 0.91 10.4 5.1 1 23 1787 1809 1787 1809 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.19	16	6.5	2.7	1	23	1403	1426	1403	1426	0.96
2	8	1.9	1.6e+02	3.3	1.4	1	23	1431	1454	1431	1454	0.96
3	8	0.013	1.1	10.1	0.8	3	23	1645	1666	1643	1666	0.89
4	8	0.019	1.6	9.6	0.3	2	23	1675	1696	1674	1696	0.96
5	8	0.11	9.3	7.2	0.7	1	23	1703	1726	1703	1726	0.96
6	8	7.8e-05	0.0067	17.1	1.5	1	23	1732	1754	1732	1754	0.97
7	8	5.6e-06	0.00048	20.7	1.2	1	23	1759	1781	1759	1781	0.99
8	8	0.011	0.91	10.4	5.1	1	23	1787	1809	1787	1809	0.99

Sequence Information

Coding Sequence: ATGGTAGCAAAGTTCCGACGGCGTTGCGTTCGTGTGCAGCAGCGTTTGCATGAGATTGCTAAGAGAAATATTGAGAAGAGCAACGCGGCGGCGTcgtctgctgttgttgttctcactaccaacaacaacaacaacaacaacacagaagAATTgtcacaaaagcaacaagcacATATTAAGTCACAAGAAGAACAGTTAGAAaaaagcatacaaaatgaTACACAGAATCCAATAATGGAACATcaagcacagcagcaagaaattgaaaatttaacgGAAGATTATATGCATCTACCACAGACACAAATGGAACGTAAGCGTCATTTAGGTCAAAGCAAGGAATCGGTACAGCAGGAGCCTAAAAAATCAAAGACTGATAACGAACGTTTGGAGCGTGTGGAACGAGTGGATCGTGTGGAGCGTGTGGATCGTACAGATCGTACAGATCGTACAGAGCAGCGTGTGGATTTGTCATcatttaaagtaaaacatacacatacacacacacatatgcgaGTGCGTAACAAACGTTTTGCGTCATTGCCTGCCAATCGTAGTGATGTAGATGATACAAACACAAGATGCTACCCACAAAATACAGACAGCAATGCGACTGCAATGCAGCTATCCGCCTACACTGATAAACAAGTACCTTGGAAAACGAAAGCGGCACGTAAACAGCTATCTGAAACATGGTCAGTGGCATCCAATTCAATACAGAATGGTGGTAAAAGAATGACATTAGTAGCGAAAGCAAATAATATTAGCTCTGAAACATCTTCGTCGACATCATCGGGTCAAACATCACCGGAACAGCTTAGCAGCTTATCCGTTGATCCATTGCGTGGTTTTGAAAGTGATGGTAATACTACGTcaacaacattatcatcatctgGTGACTCAAAGACACCAAGTCGTAAGCCAAAACTTCAGTTTCCACCTAAACGTACACCACATAAATCGTTGCCACCGTTGCGACGTGGACGACGCCCTCGTGCATCACTAAACCATGCGCCGGTGAAGCGAACGAGACGTTCCATAAAAAGAGTGTTGAATACTGCACAGGAAACATCAGATGAAACCCACAATGAATTCAATGAAAGAACTCTGATGTTCAGTAAACCAGAAGAACAAACtcacaaaatgtttaaatcatCTCCAGCAACTGATAGTTCATCCTCCAGTTTTGATGTAATGCCGCGTAGTAGCTCTGATGAATACTTAGATACCATTTCAAATGGCAATCTAACAAGCATACCGGATGCCTCAAGTCAGTCACCCAATGAAacaacttttgctgcttcGCCGCTGTTTACCAACCAAATGCGAACTGTTCATGAAGTTAACATGGATACGCCAATAATATTTGCAACTcaccaacagcaccagcaacagcaacagcaacaacaaccagaaaTTTGTGTACCCACAAATGAACCACTTACAGTACAATGCATTGGACTAGAGGAATCGAGACATCATCAAATCCAACCAGCTGTCTATTATGAACTGCAGTTGAATTCTGAACCAGTAAGCCATAGCTTAAGCAGTTTGCCTGAGGGCAATAAGTTAGTCAACCAATTGGGAATGGACGTCATAACAGAACAAGTTAATATTCAGAGTGCCGAACCAGTGTTGAATGAAGCGTATAATGTAAGAGCAGTACAACCGATTACCAATCTAATTCAAACTGCTCCGGATACTGTGAATTCTATACAATTACCAGTACCATTACCAGTAACATTACCTGGAGCAGGAGCTGGAGATGGTGAAGGTGGAATTGTGGCACTAGCAAATCCAGTGCAATTTGAAGAACTTAGCTCATCGATGGGGGAAAGGCAAAGTGTAACGCCCGAAGTACCATCTGTTCAAAGCGAAATTGAAATcagtattataaataatgagCAGGTGGATCAAAAGAATGAACTAATTGTTAGCATACCCCTAAATGCAATCAATATGGAGTTACAGCGTAAACTTTTCATTAATGAAACTGCACAGTGCTCAACAAAGGATAAGGATGAACAACATGATGCAGACCAGCAAAAGGATGCAACAACGGATACCGATGATGTTAACAATAATGCAAATCGAGAGCATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATTCTGTTGTGGCACtcgataaaaataaaattgaagccGAACCAAATGGAGGCATTAATAGAAAtcatgacgatgacgatgacgatgatgatgatgatatggAATCACTTAAACGTCTCGTCACAATGCCATTACAACATCCAAATAGTGTACAAGAGCcacaaatacaatttgatgGCATACAATTGTCACGTCCAAATGCAACACCAATGGACTTTTTAGCTGAATTCGAGAAGCATTGTGAGAAGACCCTTAAATTGCAACCTGGCGTAACGTTAGACTTGAATTTAGAGAGTGCAAAACagcagttgcaagttgaaatGACGGATGTAGAGACAACATTGCATGGCATATTGAATGAAATGGAGGATGAACATCTCTATACCCCGGTCTGTGAGCCAATTGATGAGTTCTTAACAACTGCCGATTATACGCCACTTAGTGATGGCCAGACAACGCCGACAGAACCGATAACTGCAAATTTATATCAGCAAAATGAAAcgcatcagcaacagttgcaagaacaacagctgcagcaacatcaacagttgcaacaacaacaacaacagctgcaacaacaacagctacaacaacagcaacagctacaacaacaccagcatgTACAGGTCCAAAAGGATGGAAATCTATTTGATAGCACGAACTTCACCAATGAGCTGATTGCCTTCCAAAATGATATGCCTTGCTTTGATAATATGGAAACCTCTCCTGAAGCGGTTGCAGCGCAGAGTCTGCAGTTAGCTGAACTAACACAATTACTTAATGACCTGCAGccaacacagcagcagcaacaaccacagcagcaacaacagcagcaacttcaacaagaacagctacaacaattgcaacatatACAACAGGCACAACCAGGACAAGTGCCAACAGTAAATGGCACTACatcaacaaccacaacaactcTGATTTccgacaccaacaccaaccCTAACAACAAGCTGCAGCTCATCCAAATGCAGCCACAGGAGACACTATGGCAGGCACAAcaacagacagcagcagcggctcaTCAGACGAGTCATTTACAATGGTCAAGTGTGGGCGGACTGGAGGCTGTTAAAACTGCAACCATTCCCACTATTGAGAACAGtatgaacaacaacacagGCACAACAACCTACTATATCAATGCAAGTGATCTCTACCAGACACAGATACAACAGCCGAGCAACGAGACTTATGCTTTGTTGGATAATAATGAGAATTATGTACTacagcatcatcaacatcagcatcagcaacaagaacaacatcaattacaacagcaacagattcagcagcagcagcagcatcaacaacaacaacaacagcaacagcagcttcatcatcaacaacatcatcatcaacaacaacaacaacagcagcagcaccagcaacaacaacagcaacaaccgaTTATGATATTAATTCAGCAACCAGAGATGCATCAGCCAGTTGCCTCAGCTAGTAATCCTCATCAAGCGCCACTTCACATAACATATAGCACGAATGTAACCAATGATTTACATGCgtaccaaaagcaacaacaacaacaacagcagcaacagcaacagcaggtgGTAGCCAACCAGCAACAccttcaacagcaacacgccCAGCAACAACACGCCCAGCAGTTACAcgcccaacagcagcagcaacagcagcagcagcagcagcagcagcagcagcaacaacagcaacagcagcacgcCCAAAAGCAACACACCCATCAACTTtccaagcaacagcagcaacaaaaacaacaacaacaacaacaaacagaacaaccaatacaacaacagcagcagcaacaacaaaaacagcagcgtcagccagaacaacaacaacaacaaaaacaaaagcaacaacaacaacaacaagagagtgaacaacaaaagaaagatAAAGAACAAACAGTATTAGGGGTGCCACCTGTTGCCCCGCCTACTAGGGGTCGACCACCAATGTTAAAGTGTCGATTCTGCCAGAATGGTCCGCGTTTCTCTAGTAGCTTAGAATATAGCCGTCACATTATCGATCTGCATCCAGCCGATGCGCCCTTCAATTGTCCACACTGCCCGCTGGCCTTTGGTAGTCGGAATAAACGGCATCAGCATGTACTCACAAGTCATGTGGTGCAGCAATTTCATTGTGGACAATGCTCTCAACTATTTCCCGCTCAGCGTTCCCTTGATTTGCATCTGCAACGTTTCCATATGCCCTACATAACAGAAGGTATACCCTCTGGTGTGCGTCTCGATGAGATTACACTCCAATTGACAACCAATGAGCCAAAGCCTCAGTTAGTGACCCCACAGCAGAGAgCTTTGGAACGACAAAAGAGCCCGTCAAAAATACGTAAGACGCGCATACTTTGCTGTCCCGACTGCGAGGATTGTACAACTACACCTGGCCATGAACATCATGATGATGGTGCACCAAAATATGAGGAACTATGCCAATTACAGCCACCACCAGCTGTGTTATCACCACCATCGACTATAGCATCGTTGCCATCGCCACAGCCATTGAATATATCGCCACACATAACTATGCCCTCACCGGAACAATCGGAACCAGATTCAACGACCGCAACATTACGACAATTCCGGAAGCGATGCGTAGCCAATGGCACGTCTACTCCCACAACAATGGCTGGGCAAACAGTTAATACAGCAATGTTAACAGCAGTGGCATCGCCTTCACCTTCCTCATCGCCATCATCATCGACTATGGAAACGGCTGCTGTAACGGTACAATTGGGTAAATTGCGTAGCAACCACGATTGCATCGTATGTGATAAGCAATTCACCAATATGATTGCGTTGCGTAAACATCAGCAATTGGCCCATGATTCCCAAACAACTATGCCATGGGTATGCGCGATTTGTAAACGAGGCTATAGGAAACGCATCGATATGGATAATCATATGAAATCACATGAAGCAAAGGGACGGCCATATGAATGTAATGAATGTTTTGTACGCTTCCCGGAATTCAAACAGCTGGCCATGCATAAGTTCACAGTTCATGAGTTGATCAAGCCGCATACATGCGACGAGTGTGGCAAACAATTTGGTACGGACAGCGCCTTAAAGACGCATATTAAATTTCACGGTGAACGCGGCTTTCAGTGTGAAGAATGTGATGAGATATTTACCTATATCAAAGATTTGCGAAAACATCGCCGTACCCACAACAGTGAACTCTTTTACAAATGCGATAATTGTAGTCGTACCTTTCTACATTTTACAAGCTTTCGTGCACATATGAACACGCATTTGCCGTTAGGCGTTTTTATTAACGATAAGGCAAGTTTAACACCTCCCAGCAGCTGTCAAAGCAAATTGGATAATCCAGCTACACCAGCAACACCTGTAACACATGATGAATCATTACCAATGACACCATTAAGTAATTTCAatggtaacagcaacagtaacagtgaGGATTGTCCCGGCTCTGTGGAGATGGTGGAAAGCAGCCTTGCACCAACCTTGGAAATGATCGTTGATACGCCATAA
Protein Sequence: MVAKFRRRCVRVQQRLHEIAKRNIEKSNAAASSAVVVLTTNNNNNNNTEELSQKQQAHIKSQEEQLEKSIQNDTQNPIMEHQAQQQEIENLTEDYMHLPQTQMERKRHLGQSKESVQQEPKKSKTDNERLERVERVDRVERVDRTDRTDRTEQRVDLSSFKVKHTHTHTHMRVRNKRFASLPANRSDVDDTNTRCYPQNTDSNATAMQLSAYTDKQVPWKTKAARKQLSETWSVASNSIQNGGKRMTLVAKANNISSETSSSTSSGQTSPEQLSSLSVDPLRGFESDGNTTSTTLSSSGDSKTPSRKPKLQFPPKRTPHKSLPPLRRGRRPRASLNHAPVKRTRRSIKRVLNTAQETSDETHNEFNERTLMFSKPEEQTHKMFKSSPATDSSSSSFDVMPRSSSDEYLDTISNGNLTSIPDASSQSPNETTFAASPLFTNQMRTVHEVNMDTPIIFATHQQHQQQQQQQQPEICVPTNEPLTVQCIGLEESRHHQIQPAVYYELQLNSEPVSHSLSSLPEGNKLVNQLGMDVITEQVNIQSAEPVLNEAYNVRAVQPITNLIQTAPDTVNSIQLPVPLPVTLPGAGAGDGEGGIVALANPVQFEELSSSMGERQSVTPEVPSVQSEIEISIINNEQVDQKNELIVSIPLNAINMELQRKLFINETAQCSTKDKDEQHDADQQKDATTDTDDVNNNANREHFCQSATADSFNSVVALDKNKIEAEPNGGINRNHDDDDDDDDDDMESLKRLVTMPLQHPNSVQEPQIQFDGIQLSRPNATPMDFLAEFEKHCEKTLKLQPGVTLDLNLESAKQQLQVEMTDVETTLHGILNEMEDEHLYTPVCEPIDEFLTTADYTPLSDGQTTPTEPITANLYQQNETHQQQLQEQQLQQHQQLQQQQQQLQQQQLQQQQQLQQHQHVQVQKDGNLFDSTNFTNELIAFQNDMPCFDNMETSPEAVAAQSLQLAELTQLLNDLQPTQQQQQPQQQQQQQLQQEQLQQLQHIQQAQPGQVPTVNGTTSTTTTTLISDTNTNPNNKLQLIQMQPQETLWQAQQQTAAAAHQTSHLQWSSVGGLEAVKTATIPTIENSMNNNTGTTTYYINASDLYQTQIQQPSNETYALLDNNENYVLQHHQHQHQQQEQHQLQQQQIQQQQQHQQQQQQQQQLHHQQHHHQQQQQQQQHQQQQQQQPIMILIQQPEMHQPVASASNPHQAPLHITYSTNVTNDLHAYQKQQQQQQQQQQQQVVANQQHLQQQHAQQQHAQQLHAQQQQQQQQQQQQQQQQQQQQQHAQKQHTHQLSKQQQQQKQQQQQQTEQPIQQQQQQQQKQQRQPEQQQQQKQKQQQQQQESEQQKKDKEQTVLGVPPVAPPTRGRPPMLKCRFCQNGPRFSSSLEYSRHIIDLHPADAPFNCPHCPLAFGSRNKRHQHVLTSHVVQQFHCGQCSQLFPAQRSLDLHLQRFHMPYITEGIPSGVRLDEITLQLTTNEPKPQLVTPQQRALERQKSPSKIRKTRILCCPDCEDCTTTPGHEHHDDGAPKYEELCQLQPPPAVLSPPSTIASLPSPQPLNISPHITMPSPEQSEPDSTTATLRQFRKRCVANGTSTPTTMAGQTVNTAMLTAVASPSPSSSPSSSTMETAAVTVQLGKLRSNHDCIVCDKQFTNMIALRKHQQLAHDSQTTMPWVCAICKRGYRKRIDMDNHMKSHEAKGRPYECNECFVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTDSALKTHIKFHGERGFQCEECDEIFTYIKDLRKHRRTHNSELFYKCDNCSRTFLHFTSFRAHMNTHLPLGVFINDKASLTPPSSCQSKLDNPATPATPVTHDESLPMTPLSNFNGNSNSNSEDCPGSVEMVESSLAPTLEMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -