Zqui012346.1
Basic Information
- Insect
- Zygothrica quintamaculata
- Gene Symbol
- -
- Assembly
- GCA_037044455.1
- Location
- JBAMBS010001361.1:134822-140294[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00014 0.012 16.3 0.1 1 23 158 181 158 181 0.96 2 13 0.0015 0.13 13.1 2.9 2 23 230 252 226 252 0.89 3 13 0.58 49 4.9 6.2 2 23 433 455 432 456 0.95 4 13 0.012 1 10.2 0.1 1 23 527 550 527 550 0.88 5 13 2.1 1.8e+02 3.2 0.1 2 14 569 581 568 593 0.85 6 13 0.00073 0.063 14.1 3.3 2 23 601 623 601 623 0.96 7 13 0.07 6 7.8 0.1 1 23 728 751 728 751 0.94 8 13 0.00043 0.037 14.8 0.1 1 23 825 848 825 848 0.93 9 13 0.0012 0.1 13.4 2.2 2 23 898 920 897 920 0.97 10 13 0.00086 0.074 13.8 1.8 1 23 1018 1041 1018 1041 0.92 11 13 0.0049 0.42 11.5 1.7 1 21 1093 1113 1093 1114 0.95 12 13 0.55 47 5.0 0.2 2 23 1159 1183 1158 1183 0.77 13 13 0.73 63 4.6 0.3 1 14 1201 1214 1201 1225 0.79
Sequence Information
- Coding Sequence
- ATGGAAGGCATGGATCTTTGGACGTCTATGTTTTCAACTGATTTTGAGGAGGGTGATGGTGAGAcagataattataataatggcAGCAGTACGCATGCAGACGAATATATGTGCGAGGATGAGGAGGAGGACCGTCCAACTGAATTTGACGAAGCTGATGAAAAGGTTGTTGACACTAGAacaagaaagagaaaaggacATGAACCTGATGATGAtgcgatttttaattttgaattggaACCACttgtaaatattaatgaaCCGGCATCGAAAATAGCGACAAGACCGTCACTTCCATTAGTGCCACCAATGCCGACCGCTCCATCTGTGCGGCCCATTCAACGGCAATCATTGCCCCCGGCATTAGGTCGAGGAGCAAGTAGCGTAGCACCCCCAGCACGTCCAACAACATCACAAATTAACGCTACAGATGAAAATGGAGTGCTCATTAATTATGAGCTGGGTGTTATCTATATATGCCCAGCTTGCGGTACTGAATATCGGCAGCAAGACATGTGGAAGCGTCACATGAATCAAGTGCATCAGTATAACACACGCAGGGGACtcaattttgttgctattgataAATTGTATCATCGTTGCTTGGAGTGCAGCAAGCGTATTGCGATGCACAGTCGTGAGAATCTGTTAAAGCACAAGTTTACCCATTTGCCATATCGTTGCACCAAGTGCTACATATGTAAACGAGAGTACAAGTACAGGCAGGACCTGATGGTGCATCTACGCATGGTGCACTGTGATGAGATAGTGGCAATGATGCGTGCTGGCGACGCTCCTGTCGGTCGCAAAACCCGTGTTCGTGAACCACGTATTGATGCACGTAATGAACCACGTATTGAACCACATCATGTCCCACATTCCCGCCCAACTATTCGTAATGATGATCTTGCAGTAACCTGTAATGATATGACACAAACAGATTTAACTACGCCCGGAGATGAATCTAACTTTGGTATAGATGACGAAGAAATTCATAGCTTgaaccaaccaacaacagccaaaagtAAACGTAGTTATGTAGGAATTGTTGGTGCAGATATTTGTGAGGAttacatacattatatgtGCCCAGATTGCTGTACCGACTGTGACACACATGCCCAATGGAGTCAACATATTGAGTTTGTACACGATTATGTTAGTCGTCGTGGTCTCAACTTTCGTTGTGTAGATATGCAGATGCAGTGCCTCGAGTGTAATCAGTTTGTTATCCCGAATACTATTAAAATGCTGCGAGCACACAAGTTTAGCCATTTACCACAGCCAGAATGGTTGCGATGTAAATTATGCTATAAGGGTTATACGGAGCATCATAAGCTGGTTACGCATCTTATGAAGGATCATCATTTTGATAGTTTGATAGCTGATGATGAGGATTTATTAACTAGTGCAAGTGCTAGTGTTGCTcctaatgatgttgttgacgataaaaatgataatagCAATGTTGAGGGAAATGgcgatgattatgatgatgatatgcTGTCTCATTTGGAGGATACACCACGCCGTGGTGGACGCATTGGCAGTGACGACATGTACGAACCACATATCGATTATCTATGCCCACAATGTGGTAGAGAGTTTATCGAAAAGAAATACTGGCGCATACATGTTGTGCAAGCTCATGGCATGAATGATCTGGCTAAGTTAAACTTTGAAGTGGTTAACGATCGTCAGTTAAAGTGTACCGAATGCGATAAGATTATTACCAATGCATATGGTATACAGAATGCTCAACAACATAGGATAACACATCTACCATATAAGGCTTATGCGCGATGTCGTAAATGCCACAAATCATATACGGATCGTAAAGGTTTGGTCAAGCATTTAGCCACTTATCATCGTGTTGGCTATGAACCACGTAAAACTGCTGGCGGAACAGAAGTACCTTCAAACGCAGGCTTAACAGCAGGTGGACAATCATCTAAAACAACACCGCTGCGTAAACAAATTGTGACTGTGGCAAATGAAACGTTCGAGATAACATATTTAGATGAAGAGGATCAGTCGCCGTgtagtaataataacaattatgaGGAAAACGATTTCGGGGAACAAATGCAAGAGGATGAAGATGATTATGTCATAAGCAACACTATTAACTCAACCAATAGTCGTCAGTTACCAACAGCTTCTGTAACGAAACCAAATCGATATAAGTGCGTAGACTGTGGTTCCTTATTTCCAACACAAGCAATACTCAAGACACACATAAGTGAGGAGCATGATTTTAGTGAGACGCAGTATAGTGCCAAAAGGTATGACAATGCCAAATCAAATAATGAGGAAATGACATCCACCGCTATATCTACAGATGCAGCCACAAccagtaatagtaataatacaGCATTAcctgcaacaacaagagaagcagcagtagcagcagcagcagatagGATAGCAATAAATTCCAGGGGGATATCTACTATAGAAcagaattatatattcttatgtCCATCATGTGGCGAGGCTTATAAAACGCAGTTCGAGTGGCGTCGTCATATCAATGAAGTGCACAGTTTTGATAAGCGTCAATATTTGAATATGCGTCAGTTGGATAAGTATCGTTACCAATGTACGCTGTGCCAGGATATTGTATGTAATTCGAAATTGAAAGGTTTACAGGATCATCATTTTCGTCATCTGCCTTATCGACTTTACTTAAAATGTCTTGTTTGCGGCACTTGTTATAATCATAAGCCCAACATTGCGGCACATCTACGTACGCGTCACAATATTTATGAACGGGAGACATCATGGCGTGAATTTCAACCAAGGgcgcaacaagaacaactaaGTAGAAATACAGATAGGGATaaggaaagggaaagggataCAGAAAAGGATAATGAAGTGCGTGCAATCTCCTCCAGCTCATCGTCGCCAACTCTTATCAGTAGCAGTATACCACCTGGTCGATCCCTTAAACCATTACCAGGTGTGCTACCATCCCGACCTGCTGGACTAAATACTTTGGAGGATAGCATTTCATATCATAATGCTGTAGATCTAGACTTCATTACCTACTATTGTCCTAAGTGCAACAAAAACTTCAATTCCCATGCATTTTGGCGCAAGCACATCGTTGAGGTGCATAATTATAACAGTCGCCAGGGTTTAAATTTCAGACAGATCGACAATCATCACTATCTATGCCTGGAATGCTATAAACGTGTTACAGTAACACATACTAAAGGCGCTATCGGTCAGCTGCAGTCTCACAAATTCCGGCATCTTCCATACCGATCCTTTAAATGCTTGACGTGTAATGAAGAATTTGTGCGAAAGCAAATGTTCTTCAAGCATTTGAATAGGGATACAAATCTCTGTGACAACAAACCGCTTAGCATTCacgacaatgatgatgatttcaCACAATCGGAGAATATCTGCGGCATTGACACTGTGACGATTCCCGATGAAGGTGATCCCGCTATCTATCGCTTGATGTGTCCACAGTGTGGTGATAATTTTACCACCAGTAGCAAAACCCTTTGGCGTGAACATATCAACATATATCATGGATTGGGTAAACGGGAATTATTGCATATGCAAAAACTAGGCGACGAAGGGTATTCTTGCACAGATTGTGATGAACAATTATCCACGAACAGTTTACGTGTGCTGCAGGAGCATAGATTTCGTCATTTACCATATGCCGCCTATATACGTTGTCAGCTATGCGAAAACCAAAAGGATGGATTAGGACACGGTACTGCTGCAGCAGGGCTGCATAGTATGCGTGAATTGTTGCAACATGTACGCGGACATCATCCCGAAGAAACCGAAAACGATGAACGTATGCAAACGTTAATGAATGATGAGGATAGTCTTCCGGCTAACAATGAACCTATCGATAATTCGTATATGCCGATGCCACCTCACTTGCTGGACGATGATGTTGAAGATCTAGAGTTTGAAGAACAATATCTGTTGGGTTAG
- Protein Sequence
- MEGMDLWTSMFSTDFEEGDGETDNYNNGSSTHADEYMCEDEEEDRPTEFDEADEKVVDTRTRKRKGHEPDDDAIFNFELEPLVNINEPASKIATRPSLPLVPPMPTAPSVRPIQRQSLPPALGRGASSVAPPARPTTSQINATDENGVLINYELGVIYICPACGTEYRQQDMWKRHMNQVHQYNTRRGLNFVAIDKLYHRCLECSKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEIVAMMRAGDAPVGRKTRVREPRIDARNEPRIEPHHVPHSRPTIRNDDLAVTCNDMTQTDLTTPGDESNFGIDDEEIHSLNQPTTAKSKRSYVGIVGADICEDYIHYMCPDCCTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECNQFVIPNTIKMLRAHKFSHLPQPEWLRCKLCYKGYTEHHKLVTHLMKDHHFDSLIADDEDLLTSASASVAPNDVVDDKNDNSNVEGNGDDYDDDMLSHLEDTPRRGGRIGSDDMYEPHIDYLCPQCGREFIEKKYWRIHVVQAHGMNDLAKLNFEVVNDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKTAGGTEVPSNAGLTAGGQSSKTTPLRKQIVTVANETFEITYLDEEDQSPCSNNNNYEENDFGEQMQEDEDDYVISNTINSTNSRQLPTASVTKPNRYKCVDCGSLFPTQAILKTHISEEHDFSETQYSAKRYDNAKSNNEEMTSTAISTDAATTSNSNNTALPATTREAAVAAAADRIAINSRGISTIEQNYIFLCPSCGEAYKTQFEWRRHINEVHSFDKRQYLNMRQLDKYRYQCTLCQDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERETSWREFQPRAQQEQLSRNTDRDKERERDTEKDNEVRAISSSSSSPTLISSSIPPGRSLKPLPGVLPSRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFNSHAFWRKHIVEVHNYNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNEEFVRKQMFFKHLNRDTNLCDNKPLSIHDNDDDFTQSENICGIDTVTIPDEGDPAIYRLMCPQCGDNFTTSSKTLWREHINIYHGLGKRELLHMQKLGDEGYSCTDCDEQLSTNSLRVLQEHRFRHLPYAAYIRCQLCENQKDGLGHGTAAAGLHSMRELLQHVRGHHPEETENDERMQTLMNDEDSLPANNEPIDNSYMPMPPHLLDDDVEDLEFEEQYLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -