Basic Information

Insect: Zygothrica quintamaculata
Gene Symbol: -
Assembly: GCA_037044455.1
Location: JBAMBS010001134.1:118301-126119[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.071 6.1 7.8 0.4 1 23 570 592 570 592 0.96

2 7 0.34 29 5.7 0.6 2 19 597 614 596 615 0.97

3 7 6.5e-06 0.00056 20.5 0.3 1 23 621 643 621 643 0.99

4 7 0.0033 0.28 12.0 4.2 1 23 653 675 653 675 0.98

5 7 0.00077 0.066 14.0 0.1 2 23 682 703 681 703 0.95

6 7 1.2e-06 0.0001 22.8 1.3 1 23 709 731 709 731 0.98

7 7 9e-05 0.0077 16.9 3.5 1 23 737 759 737 759 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.071	6.1	7.8	0.4	1	23	570	592	570	592	0.96
2	7	0.34	29	5.7	0.6	2	19	597	614	596	615	0.97
3	7	6.5e-06	0.00056	20.5	0.3	1	23	621	643	621	643	0.99
4	7	0.0033	0.28	12.0	4.2	1	23	653	675	653	675	0.98
5	7	0.00077	0.066	14.0	0.1	2	23	682	703	681	703	0.95
6	7	1.2e-06	0.0001	22.8	1.3	1	23	709	731	709	731	0.98
7	7	9e-05	0.0077	16.9	3.5	1	23	737	759	737	759	0.98

Sequence Information

Coding Sequence: atggccagcatcagcagcagcagcataacaAATGCAAGCAGcgttaacagcagcaacagcgctACAGCGCTACCATCACTATTCgccggcagcaacagcagcagcaacagcagtagcatcagcagtagcacaACAAACATAGCCGTCACCGCCAAAGATATGGACGGACTGATTGCCATCAATGATAGCGCATTATCGCAACAAATCGAATTTATACTACAAGAAGCTCCCATGGAGCAGGATGACGAGCATCACCTGCAGCTCAATATGGCAGCAGCgtcggcggcggcggcggcggcagcagcagcagcagcagcagcagcatcggcGGCGTCAAAGCTCGATAACCACCCACcgacaacaaatgcaacaataacgacaacaacaacaaacagcgcTTCCGCATAcatcaaccacaacaacaacaacattaataacaataacaatcataacaacaacaacaacaataacagcctGAGTATCGAGGAtcaacagcaattgttgttgcaacagcatcatcacgcacaacatcaacagcaacagcaacagcagcaacagcaacaacatcaacatcatttaTTAAATGGTCGACGAATAATAATCCAATCAACGGGCAGTGGCGCCACCTCCATTCTATCAGCTGCTGATATTAAGGAAGAGCGACAAGACCACGATGATGATCCAGATGAtgaagaggaggaggaggatcCAGAATTAAATGATGAAAATTTACAGGATATTGAAGAAGAGGCGCAGGCAGCCGAAGCTGATGAAGAGCCCGAAACAGCTTCACATttgcatcatcagcatcagcaacatcatcatcaccaacaacagcaacagcaacagcaacagcaacagcaacttcatcaacaacaacagcagcagcaccagcatcaacagcaacaacaacaacaacaacatctacagcagcaacaacaacaacagcaacacttaCAAACGCAGGTTAAACTGGAACTGGATGAGTTGcccgatgacgatgatgaggatgaggatgaagaTGATCAAATGTCGCAGTcaacgcaacagcaacaaattgagtcactgcaacaacaattggagTACTCGACAGCAGCACAGCAATTGGTGTTGCCAGCTGGTAGCATTGTGAGCACAACTCGTACACTGGCCGTACCCGTTTCAGATGCAGCACTTGTCCAGCTGCAACGTCGCCCTGTTTACATCAGCAATGCAACAATGAACAGCTTGGCTGGTGCCACATATGTACGTATGCCAGCTGCTGCGGTTATCAGTCGAAGTCCGATGACTGTGTTGAATGTGGTGCAGCAAACGGGTGGACCCACAGCACAATTGATATTGCAGACAGCAACGGCGGCACCGACAGCAACgggacaacaacagcagccagcaatagcagctacaacggcagcagcagcagcggcgccTTCGCCGAGcattgagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacagcaacaaatggcaGCGATTGCGCttgcacaacagcagcagcaacaacaacagcagcaacaacaacaacagcaacaacagcagcaacagcaacaacaacagcagcaacagcaacaacaacagcatcatcagTCCATTAAACCAGCgccagctacaacagcaacaacaacaacgtcagcagcaacaacaacaagcgttgcaactgccacaaaCAGTTACCAGTGCATGGAATGTGTTGAAAAATTTGATTCAAAGGAACTCTTTGATATACATCGCAGCGGGCACGCGAACAACATGAAATGTGCAATCTGCAATATGGTATTAAAGTCATTAAAGAACTATGAAAAGCATTGTCTACGCTGCAAGCCCTATGAGTGTCAAATATGTGGGCGTGTCGTACGTTTTCGCCCCAATTTCATAAAGCATATGCGTGTCCATACGGGTCAGCAATCGGAGcggcataaatataaatgtgagGTATGCCACAAGGAGTTCATGAGCTTTGAATACTTTAAGGTCCATAAAAAGATACACAATGAGAATGTTAATTTGACGTGTGAGATTTGTGGCAAGGTATTCAGCGCATTAGCATCCTTACGTGGACACTCAAAGCTACATTCAGGCGTCAAGTTGCACAAATGCGATGTTTGTGGCAAAGGTTTTGGGCAACGTTATAATCTCAAGATtcatgcacgcacacacacaggtgATTTTCCATTTGAGTGTAAAGTGTGTAAGAAGAAGCTGCATACACAATCATCGCTACAGACGCATATGCAGGTGCATCTAAGGGATCAGCCAAAGGGTggcagtaacagtagcagtggcagtggcagtggcagtggcagtggaagtggcagtggcagtggcagtggcagtagcaatGGTAGTGGTGGCAGTAGTAGCAATAGTAATGCTGGTGTTATTAAAGTAGAACCAGATTTGGATAGACCTAGTACAAgtttgcaacaacagcaacaacagcagctgcagcaagaTATCGATATGGATGATCAATCTGGTTTAAGTGAGGACGAGAATAcgattaataatcgtttaaCCACCGGAGATGACTCTTCTGAATCGTCATCGAATGCCTCgctacagctgcaacagcactCCTCCTCAGCCAGTTCATCGCATtcattgcaacagcaacaacagcagcaacagcaatatctTATGTCCACGCCAACGCGTACAATTGTCATTAAGAAttatatgcaacaacaacaacaacaacagcagcagcagcaatctcCAGAGCATCAAACTGccgatggcaatggcaatggcaatgttaACTGTACAGGTGTACTCCATACACAGGTGATACAGAGCGGTGCGGGCACCAGCAATGGCCATCATATAATGAATACAACCAACAATGCCAATacaaacagtagcaacagtaacagcagcaacagtaatagcagtagcaatcATAGCCACACCAATACCcacaataccaacagcagttgcagcagcaacaatagcaacagcagcaccaattCATCAATAACGTCAACAACAGCTACTGCCAGCAATTTGGCACAGCAATTGCTACGCAAGACGCCCATCATACACTCAACGGGTACGCTTAGCTCCGCCCTGGCGAGCGTTGTTCAGCAGACGGGCgTTGGTTCACCGGCGCAGtcaccatcatcatctttATCTACATCGTGTTCCTCCACCGTGTTGGTGTCCAAAACGACGGGTGTACCGTTATCCATAGCCTCATCGGCGGCGCTCGGCGGTTCAACAATAATACGCAGTACGCGcaatcatcaacagcagcagcagcagcagagtcaAAACCATTGTAGTAGTAATCAGCGTGCTGGTAGTggacatcagcaacagcaacaacagcagcaccaccaacaacaacaacaacagcagcagcagcgaagtAACCACCGAAACCACCACCGACGTCGTCATTTAGCAGATAtggatgatgaggatgatgacgatgatgatgaggaggatgctgttgctggtgctactgctaatgctgctgttgttaacaATAATAGCACCACCAATGGGCATCATCATcaaaatcatcatcaacatcatcaacaacaacagcagcagcagcaacaacatcaacagttacaacacacaaatcatcatcatcatcatcatcaacaacatcaacaacatcaacaacagcaacaacatcaacatcatcatagCCATAATCATAATCGTAACAATCATAGCAACAATCATCATaataatcaacaacaacaacaacaacagcagcagcagcagcagcagcaacatcttggcaatcatcataatcatttcgatgatgatgatgacgatgagaAATCATCACCGTCCCTGGCCACAGCAGCCATCATAAAAGTAGAACCGAATCTCTATTCATCTGGATCTGGTGATAACTCAAACGATATGTTCATTAAGGAGGAAGTTATGTTCGAAGATTCAGCAGCACCACATTCACCACAATCACCGCCAAGCTCTAAATTTCGTATATCAAATTTTGATAGCGATTTAGTTGATCATCATGTTGATTTAAATCATTCATTGCCACCATATGGTAATCTCTTTGAGCCACATTCAATACCAGATACTATACCCGTCCAATTATATCcggacgatgatgatgattttcgTTTGGATCATAGCTCTCTCGGTGGCCTACATaatacatcatcatcaacaaccgATGGTGATTTCATTAAAAAGGAATGGGTCTATGGCAGTGGAACAAGTTCATATGCGATGAACGGTAAATTTGATGATGATAGTGATGCATTATGTGATGCAGCTAATTTCATCTATAACTGA
Protein Sequence: MASISSSSITNASSVNSSNSATALPSLFAGSNSSSNSSSISSSTTNIAVTAKDMDGLIAINDSALSQQIEFILQEAPMEQDDEHHLQLNMAAASAAAAAAAAAAAAAASAASKLDNHPPTTNATITTTTTNSASAYINHNNNNINNNNNHNNNNNNNSLSIEDQQQLLLQQHHHAQHQQQQQQQQQQQHQHHLLNGRRIIIQSTGSGATSILSAADIKEERQDHDDDPDDEEEEEDPELNDENLQDIEEEAQAAEADEEPETASHLHHQHQQHHHHQQQQQQQQQQQQLHQQQQQQHQHQQQQQQQQHLQQQQQQQQHLQTQVKLELDELPDDDDEDEDEDDQMSQSTQQQQIESLQQQLEYSTAAQQLVLPAGSIVSTTRTLAVPVSDAALVQLQRRPVYISNATMNSLAGATYVRMPAAAVISRSPMTVLNVVQQTGGPTAQLILQTATAAPTATGQQQQPAIAATTAAAAAAPSPSIEQQQQQQQQQQQQQQQQQQQMAAIALAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQSIKPAPATTATTTTSAATTTSVATATNSYQCMECVEKFDSKELFDIHRSGHANNMKCAICNMVLKSLKNYEKHCLRCKPYECQICGRVVRFRPNFIKHMRVHTGQQSERHKYKCEVCHKEFMSFEYFKVHKKIHNENVNLTCEICGKVFSALASLRGHSKLHSGVKLHKCDVCGKGFGQRYNLKIHARTHTGDFPFECKVCKKKLHTQSSLQTHMQVHLRDQPKGGSNSSSGSGSGSGSGSGSGSGSGSSNGSGGSSSNSNAGVIKVEPDLDRPSTSLQQQQQQQLQQDIDMDDQSGLSEDENTINNRLTTGDDSSESSSNASLQLQQHSSSASSSHSLQQQQQQQQQYLMSTPTRTIVIKNYMQQQQQQQQQQQSPEHQTADGNGNGNVNCTGVLHTQVIQSGAGTSNGHHIMNTTNNANTNSSNSNSSNSNSSSNHSHTNTHNTNSSCSSNNSNSSTNSSITSTTATASNLAQQLLRKTPIIHSTGTLSSALASVVQQTGVGSPAQSPSSSLSTSCSSTVLVSKTTGVPLSIASSAALGGSTIIRSTRNHQQQQQQQSQNHCSSNQRAGSGHQQQQQQQHHQQQQQQQQQRSNHRNHHRRRHLADMDDEDDDDDDEEDAVAGATANAAVVNNNSTTNGHHHQNHHQHHQQQQQQQQQHQQLQHTNHHHHHHQQHQQHQQQQQHQHHHSHNHNRNNHSNNHHNNQQQQQQQQQQQQQQHLGNHHNHFDDDDDDEKSSPSLATAAIIKVEPNLYSSGSGDNSNDMFIKEEVMFEDSAAPHSPQSPPSSKFRISNFDSDLVDHHVDLNHSLPPYGNLFEPHSIPDTIPVQLYPDDDDDFRLDHSSLGGLHNTSSSTTDGDFIKKEWVYGSGTSSYAMNGKFDDDSDALCDAANFIYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -