Zqui008546.1
Basic Information
- Insect
- Zygothrica quintamaculata
- Gene Symbol
- -
- Assembly
- GCA_037044455.1
- Location
- JBAMBS010001055.1:1002674-1008482[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.02 1.7 9.5 0.4 1 23 1274 1297 1274 1297 0.97 2 13 7.6 6.5e+02 1.4 0.2 1 23 1457 1479 1457 1479 0.91 3 13 0.00017 0.014 16.1 2.7 2 23 1482 1503 1482 1503 0.97 4 13 6.5e-05 0.0056 17.4 0.2 3 23 1511 1531 1509 1531 0.98 5 13 5.4e-07 4.6e-05 23.9 4.1 2 23 1538 1559 1537 1559 0.97 6 13 5.1 4.4e+02 2.0 0.4 5 23 1572 1590 1570 1590 0.96 7 13 1.3 1.1e+02 3.9 5.4 3 23 1597 1618 1595 1618 0.93 8 13 0.14 12 6.9 0.2 2 23 1629 1649 1628 1649 0.96 9 13 0.00014 0.012 16.3 0.3 1 19 1655 1673 1655 1677 0.95 10 13 1.5e-05 0.0013 19.4 0.5 1 23 1685 1707 1685 1707 0.98 11 13 9.7e-05 0.0083 16.8 7.6 1 23 1713 1735 1713 1736 0.96 12 13 0.00026 0.022 15.5 5.7 1 23 1741 1763 1741 1763 0.98 13 13 0.027 2.3 9.1 8.2 1 23 1769 1791 1769 1792 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGCGTACAGTGTCCCGTGTGCACCTTGTACCTGCATGCGGGAATGAATCTCTCAGACCATTTGGAAACGCATCCCAAGGAGCAGGTTATCAAGGCCCTGGTACAAATGACAATCGTAGGCAATGGCATAGGTGCCCTGGCGGCATCTGTGTTTTCGAATGCCAGCAATAGTGGAGCATCAGATGGTGCCAGCTCCACGTCACCGCCTGATGCGGATGTTAAgccagctgttgctgcaataTCAGTCTCCGGTCAACTACCAGCAACATCATTAAAATCAACAGCTCCAGAGGCTGCGTCATTGCTGGGTATGaccagcaataacagcagcggcagcagtaaCGATAATAGCATCAAATTGAGTAATCCACCGAATAAGGCTGTTAAAAATGCGCCAACCACGACTGAGGCGTCAGCCACTACATCCAACACACCCACCACAAGCAGCGTGGAAGTCGTTTATCCGCCAACGTTTGCAACTGATTATCGCTATGATCATCAACATCAggcagcggcaacggcaacgctACATGGCTTTTCACGTGGCAGCAACACCACCCTAGTAATACCGCAGGCGCCACAACAGCCAAATCAATTCCTGGGCACCCAGCAACCTTCGCACTTTgttcatcagcagcagcagcaacaacaacaacagcagcaatcaccgatgaaatatacatatacaaatgctTTGcccccaccaccaccgccgccttTGCAGCTCTTTGCGCATCAACCGACGACATCGCAATCACATCAGAAGCCACCGCCTGCCTATGGCGCTGCCATCAGTCAAATTCGATCTCAGCACAAccaaaataagcaacaacagcaacaacatcaacagcagccgcaacagcaacatataaaCGTACAACATAACGTAAGCCTGGCACCACCGAGTGGCAAACATAGCAAAGGACATacagaaatatttttgaatccaccgccaccaccaccacatcAGTCCACGATGTTTTCGTCGACCACCTCATCAAGACTGCAGCACCTACATCAGCACCAGCATACCCTTACTGCTACTAGCAGTAGCAGCTATTCGACAACTGGtggctccagctccagctcatTTAGTATGATGACCTCAATGTCAACTGGACGCTGCACTAGTCGCCAGTCGAACAATTCACCATTTGGTGCTTTACTTAATGCAGCGGCTCAAGTTGCATGTGCGTCACCCAGCGCCTCAAGTGCATCTGTTCTGCGCTATGCTGAGTCACCAGTAGCCCATTATTTGGAACGAGAAAATGGCGACTTTATTGTGCAGGAGACGCCCAAGCATATTGTTGAATGTGTGGAGAAAGAGGATGGCGAATTCTCAGTCATTGAGCGCATTTATCAATCGCCACCTAGTGTGCTACATATCCACGATGACGATGAAGACGAAGCGGATGATGAGGATCAAGGttgGATAAACAGCGATGAAGACGATAACGGTAAAGCTGCTCATGATCTTGTGGAAGACGGTGATGATGAACGCGAAGATAGCCGTAGCAGACCTGGCACCAAATCTACAACGAAAAAAATAcgtaaaactaaaacaagcTCTAGAATGCACAAACGTTCCTCGAAACATCCGATGGCTACAACAGAAGATGATGAGGAACTTATGAGTAGTACCGAAAGTGAGTTGTTACCAGAGCAACAGCAGTCCAATGGTACACAGGCGGGATCATCGTCTTCACCATCAGTTCTTAGCACAACACCTTCAACGAGCAGTggaacagcagctgctgccacctCTACTAGTGCCAATTCCGCGTATGGGGTCAACACCAAATCAAAGAAGAATCGTGTTACTGTTCTTAGCGATGTGCCGCTTAACATGAACGAATATCTTGATTTGATGGGTAATATTGTGGCTTCCAGTCGTATTGGTCCAGTGCGTCCGTTTGTTAAGGTGGAAAAAGAGGAGCCGTTGGATGACTATGATGCTGTTGATAATGCAATACGTAGTTCGGAAGAGGAAAAACCAAGCTTAGAAATTGCTAATGgtaataacagcaatagcaatagcagcagcaatggacATGGCACCACTAGCGTAATACGCATGGCCAGTATTAGCAGTAGTACAAACGTTGAGCCCGAGGATCTAACACAGCCACCTCCAATGAAGGTAGAGGTTGAGCCAACAACGTTTTTGCCACAACGCTTTTCAACGCCAGCACAGCAGCGTGGGCCCAAGAAATTAGTCATCAAACCAAagaccacagcaacagcagcggcaacacagacaacagcaacatcaacgaaGACGACGACGAAAAAGACtgacaacaacagtaacagcagcaataactgcACCGAATCCCCCCTCATCATATCAAAATCTTCTTCAGAACTTGTTCCAATTAAAAGCGAGAATATGGAAGCCACCGCATTAACTGGCAGCATACTGGAAAAGCACTTAACCACAAATTTTGCTGCACAACAGTCGCGAAAGCATTCCGCTGTGAATGATGACGATGCGCGGGTGCTGCTTGAGTTTGCTAACTCGAAGCAACTGCCGCTGGCTGGCACCAGCAATCAAACCACATTTGTGGTAAATGCGGCTAGCTTTGCCTCACCTGGTTCTGTCTTTGCAAGCAGCAGTGGCAATGCACAGAAATCAATGGAACCAGGCGATGAGTATATATTGCCTGATAATGATATGGAAGAGGATGAAATTGTGATATCCTCCTCGTCTTCTTTTGCTTCCAACTCACAACcccagcagcatcaacagaaTGCGCCAACGGAAGATCCAACGCATTCAGATTTGCAGTGCACGGATACTCCTGCATTCCatgattttaatttcttataccATCAAAATGCAGCAGCTCCAACTACTACTTCAACCTCAAACTTTACGCCATTTGGTCTTCAGcatcagcaccaacaacaactgcaccatcagcatcaacatcaccatcagcagcaTGGTTCCAGCGAAGCCACAAATGCTGCAACACTTGCCTCATCCTGTAGCAATTCATCAGCATTAGATCAAGAATCATCCATGAATGCGTCGTTCCGTGAAGCTAAGCCCCAGTCAAATCATAACGCTTGGTATCATTCACAAGAGGAACAGCAGCCACATCAAACACATGCATCAACTTCTCATAATCAGAATGTTGAACAGTCAAGTAACTTTATTGCAGCATTGTCAGCTGTCGAGTGTTGCAATGCTGCCCTTGATAGTGATGCAAGTGATGCAAAGTACTTGGATTTGGATACCTGTAAGCGTGAACAGTTAAGCAATAGTAGCATTCATATGCCATCTGCATCAACATCAACCACATCGTCTTCatttgctgccgctgccacggAGAGCAGTCTAGTTGGTGGTTTAGGATTAAATATACGTACGGATGAGAAGATGCCTGCCAAGGGTGAAATATCTGAGCAGGAAAGCAACTGTGACATTGAGAACTCTTGGAGTCAATCGATGTACGGGGACATATCACAGCGTTACTTTAGAAATCAATTCTCGGATGGTTATAATCAACAGCTGGCTGATTGGCGTCATGATTACTATCCGGCGCAGGATCTCAGtagtcagcagcagcaacagcagcagcgtgAACAAAAGCGCTTCGATTTCAATGCGGTCGCTTCGGAATATCCGCAGCCAAATGAACTGGAAGCaagaaacaataatttattggATGCAGTACCCACTACTTCCTCTTCCTCATCGGCTTTGTTGGCTGGTCCACCAATAGCCTCAACGTCGAGAGCTGCTGCTCAAGCGGAGGCTGTTGCAGCGGCAATGGCACAACGAAAACCACCGCGTCGCAAAATCTACAAATGTCCACATTGTGTTGCTATTTTCGAGAAGCTAAAGGAACGCAATGCGCATATGATTAGTGAACACAATTATGTGCGTCAGAATCGTCGACTTATCTGTACCCAGGCATTAATTGACAACACTCAAGTAGCATCGCAGCttccacagcaacaacaacaacaacaacttcagcaTTTGCATCAGGCAAGTGGCATACAGAATGTTGCCATGCATGAAGATTCTAAAGATGGTATTGTAAAGATCAAGCAAGAGAACTGTCAAGATAAACCTGATTCATCAGGACAAATGCTTGACCAGGTAGATATACCTGATGTTAAAGATGCGGGCTTACTAACTGCTACCGGGCAAAATGTACGTGATGCAGATATGAAACCACCAACTACCATGGATGAAAAGCTAACTTTACAGCCTTTGGCTATGACTACACCAGCTGCCAAATTAGCGGCTCTTTATCGTATGCTAATTGAGTACAATGAATCAAAACTTGGCCAAGAGCGTAACAATCTTAGCGAACTAGAACAGAAGGCTATggaaaaatcaatatttttgtGCTACGTATGCCGCACTGATTTTCCTTCTGTAAAACTCTACGATGCCCATCTAACAGAGCATCCGGCTGAATGTTTCACCTGTGGCAAGAAATTCTATCGctggaaaaacttttcattacaTCTAAAACGTCATCTGGGCTGGAAGGAGTTCGGCTGTTATGTTTGCGATAAGAAATTTGTGGTTCGCAGTGCTCTTGTGGAACATATGCGCATGCACACAGGTCAATCACCGCTCAAGTGTAAAATTTGTGgTAAAAAATTCAAACGATACTCAAATTTAACACAACATCGAAAGCGTCATACAAAAATCCTGGTACGTAAGAAGGAATATGTGTGTCACTGTGGTGAGGTGTTACCATCAAAGGCGCGCTTCTTGTGGCACAAAGAGACACATGATGTAAAGCCCAAATGTTGTCCATATTGCTGTGATCGTTTTGTGCATGCAAATTCATTGCGTCGTCACATACGTTTAGCGCATTCGGATAAATTTGATTATGCCGAACCTATGGAGTGTCCAATGTGCAAGCAAATCTTTGCAAAGACATCCATCAAGGCACACATGGCAACACATTCAACGGATCCTCAATATGACTGTGCTATATGCAGTAAAAGCTTCTCCACCAAATGGAATCTCAAAATACACTCCTGGGTGCATGCCAATCGTACAGCCAAACCATTTAAATGCGAATACTGTCCCAAAGCATTTGTACGTGAACTGGATTTCAAGAATCATATGaatgcacacaaacaaattaaaccGTACACCTGCGAGTATTGTGGTTGCAAGTTTATacgcaaatataattatatgcgGCATCGACGGGAACATCATGGTAAAAAGCAATTCAGTTGTGATCAATGCGATAAGTCATTCCATCGGCATTATTATCTTATTGAGCATCGACGCATACACACTGGCGAGCGACCCTTCCATTGCACCATTTGTGGCAAAAGCTCTACAACAAAGACCAATCACAATAAGCATCTTAAGATACATCATTCGCGAGATCCCTTTACCGTTGAGgtctaa
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNGIGALAASVFSNASNSGASDGASSTSPPDADVKPAVAAISVSGQLPATSLKSTAPEAASLLGMTSNNSSGSSNDNSIKLSNPPNKAVKNAPTTTEASATTSNTPTTSSVEVVYPPTFATDYRYDHQHQAAATATLHGFSRGSNTTLVIPQAPQQPNQFLGTQQPSHFVHQQQQQQQQQQQSPMKYTYTNALPPPPPPPLQLFAHQPTTSQSHQKPPPAYGAAISQIRSQHNQNKQQQQQHQQQPQQQHINVQHNVSLAPPSGKHSKGHTEIFLNPPPPPPHQSTMFSSTTSSRLQHLHQHQHTLTATSSSSYSTTGGSSSSSFSMMTSMSTGRCTSRQSNNSPFGALLNAAAQVACASPSASSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEADDEDQGWINSDEDDNGKAAHDLVEDGDDEREDSRSRPGTKSTTKKIRKTKTSSRMHKRSSKHPMATTEDDEELMSSTESELLPEQQQSNGTQAGSSSSPSVLSTTPSTSSGTAAAATSTSANSAYGVNTKSKKNRVTVLSDVPLNMNEYLDLMGNIVASSRIGPVRPFVKVEKEEPLDDYDAVDNAIRSSEEEKPSLEIANGNNSNSNSSSNGHGTTSVIRMASISSSTNVEPEDLTQPPPMKVEVEPTTFLPQRFSTPAQQRGPKKLVIKPKTTATAAATQTTATSTKTTTKKTDNNSNSSNNCTESPLIISKSSSELVPIKSENMEATALTGSILEKHLTTNFAAQQSRKHSAVNDDDARVLLEFANSKQLPLAGTSNQTTFVVNAASFASPGSVFASSSGNAQKSMEPGDEYILPDNDMEEDEIVISSSSSFASNSQPQQHQQNAPTEDPTHSDLQCTDTPAFHDFNFLYHQNAAAPTTTSTSNFTPFGLQHQHQQQLHHQHQHHHQQHGSSEATNAATLASSCSNSSALDQESSMNASFREAKPQSNHNAWYHSQEEQQPHQTHASTSHNQNVEQSSNFIAALSAVECCNAALDSDASDAKYLDLDTCKREQLSNSSIHMPSASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSDGYNQQLADWRHDYYPAQDLSSQQQQQQQREQKRFDFNAVASEYPQPNELEARNNNLLDAVPTTSSSSSALLAGPPIASTSRAAAQAEAVAAAMAQRKPPRRKIYKCPHCVAIFEKLKERNAHMISEHNYVRQNRRLICTQALIDNTQVASQLPQQQQQQQLQHLHQASGIQNVAMHEDSKDGIVKIKQENCQDKPDSSGQMLDQVDIPDVKDAGLLTATGQNVRDADMKPPTTMDEKLTLQPLAMTTPAAKLAALYRMLIEYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQSPLKCKICGKKFKRYSNLTQHRKRHTKILVRKKEYVCHCGEVLPSKARFLWHKETHDVKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGKKQFSCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00806219;
- 90% Identity
- -
- 80% Identity
- -