Basic Information

Insect: Zygothrica quintamaculata
Gene Symbol: -
Assembly: GCA_037044455.1
Location: JBAMBS010002167.1:57918-62292[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.012 1.1 10.2 3.3 2 23 373 395 372 395 0.95

2 18 7.5 6.4e+02 1.4 0.0 1 23 402 427 402 427 0.90

3 18 0.059 5 8.1 3.6 2 23 438 459 438 459 0.93

4 18 5.6 4.8e+02 1.8 3.0 2 17 470 485 469 496 0.75

5 18 0.018 1.6 9.7 0.2 3 23 529 549 527 549 0.95

6 18 0.00034 0.029 15.1 1.0 1 23 557 580 557 580 0.97

7 18 0.00095 0.081 13.7 0.3 2 23 585 606 584 606 0.97

8 18 7.8 6.7e+02 1.4 0.1 1 19 614 632 614 634 0.83

9 18 0.0012 0.1 13.4 0.6 1 22 654 675 654 678 0.90

10 18 0.23 19 6.2 0.4 3 21 685 703 685 704 0.90

11 18 0.0047 0.4 11.5 0.5 1 23 723 748 723 748 0.97

12 18 0.22 19 6.3 1.7 2 23 764 786 763 786 0.93

13 18 0.065 5.6 7.9 0.5 2 23 792 814 791 814 0.92

14 18 0.00033 0.028 15.2 0.6 2 23 818 840 817 840 0.96

15 18 0.00012 0.0099 16.6 1.3 1 23 846 868 846 868 0.97

16 18 0.014 1.2 10.0 1.9 1 23 872 895 872 895 0.93

17 18 3.2e-06 0.00027 21.5 2.1 1 23 901 924 901 924 0.98

18 18 0.2 17 6.4 0.3 5 23 937 956 928 956 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.012	1.1	10.2	3.3	2	23	373	395	372	395	0.95
2	18	7.5	6.4e+02	1.4	0.0	1	23	402	427	402	427	0.90
3	18	0.059	5	8.1	3.6	2	23	438	459	438	459	0.93
4	18	5.6	4.8e+02	1.8	3.0	2	17	470	485	469	496	0.75
5	18	0.018	1.6	9.7	0.2	3	23	529	549	527	549	0.95
6	18	0.00034	0.029	15.1	1.0	1	23	557	580	557	580	0.97
7	18	0.00095	0.081	13.7	0.3	2	23	585	606	584	606	0.97
8	18	7.8	6.7e+02	1.4	0.1	1	19	614	632	614	634	0.83
9	18	0.0012	0.1	13.4	0.6	1	22	654	675	654	678	0.90
10	18	0.23	19	6.2	0.4	3	21	685	703	685	704	0.90
11	18	0.0047	0.4	11.5	0.5	1	23	723	748	723	748	0.97
12	18	0.22	19	6.3	1.7	2	23	764	786	763	786	0.93
13	18	0.065	5.6	7.9	0.5	2	23	792	814	791	814	0.92
14	18	0.00033	0.028	15.2	0.6	2	23	818	840	817	840	0.96
15	18	0.00012	0.0099	16.6	1.3	1	23	846	868	846	868	0.97
16	18	0.014	1.2	10.0	1.9	1	23	872	895	872	895	0.93
17	18	3.2e-06	0.00027	21.5	2.1	1	23	901	924	901	924	0.98
18	18	0.2	17	6.4	0.3	5	23	937	956	928	956	0.88

Sequence Information

Coding Sequence: ATGTCgcaaaatataatgaaaagtaaagaaaCTGAACCTAGCTGCCTGCATTGCAGAGTTCACGATTCAAAGCTTGAATACCAGGAGATATTTGATGAACTTGGAGTAGAAATAGAACTTCCCGAACTCTTGGCCAAGTATTTTCAAGTACATGTCAAGCCGGACCCAAACCAGTCTCAACTACTATGCCTTGAATGTGTCAACACGCTTATTCGTTTCTTTGATATTGACGAACTGCAAAGGGAACAGGACGCTGCCAATGCTACTAAAAAGAATCTTGGCAATCAGCAAAAGATTGTTGTTACAACCCCGACGCCTTCACCTGcgccagcaccagcaccagtaCCTACCGTTGAAAccaaaaagaatgaaaagcCAAATGCAATTAAGAAAGCGACGCCaccaaaagaacaaaaaggCGCGAAAACTGTACAAGCGCCCACCAAAAAATTAACAGCTATCTTAAAAGTAGATAAGCCTGTGCCTATAACTAAAGTTCCAGTGCCAGCTCCATTACCAAAACAGAGACTAGAAAAGACACCAGAACCATTACCCAAACGTATTACTAGAGGTAAATCAGCTGTTGTAACAGCAAAGCCATTACCGGTTAAATCTAAAGAAGCGGTCAAAGTAGCTGTAAAAACGCGTAGCTCCAAGGATGCTGTGCCTGCTGAACAAGAACAGTTTAGTGCATTAATACGTGATATTCTAGAAGATGGAGAAACGCCTCCAGATGCAAAATTTGTGGAGGCGGCAGCAACTGTGCGTCAATTGGACACGCAAACAGATGCTGAACAAGAACAGTTACAAGAGTCTGTTGTAGAGTTGGATCAAGTAGAACTCGATGAGCCAGAAGCCCATGAAGAATTGGAGTTTCTACTGGAGTCTGAAGatgAACACTCTGACTCTGATGTTAGCCACTTTAAGGtttcaaagaaaagaaagcgcGTCAGGTCTCAGTCTCATAATGAAAGCCAAAGCGAGGATGAATCACTTAAGGTTGAACCTTTCAATTTTGTTCTAATCAAAGAATCTGATAACATTGGAGATCTCTATGAGTATTTGGATACGGTGGTTAAGACATGCTTTGAAAGCTTAACATTCGATTGGGCAACTGTGTGCCGCCATTGCTCAGTAAAGTTCACTAAATATGAGAACATGCTGAAGCACATGATTAGACGGCATAAGCTGCCCGGTGAGCAATACAAGTGCCCCATTGAAGGTTGCACTGCAGAAGTGCAAGGCAACAAATCTTTGGCTATGCATTTGGTGGTGCTTCATTCACCTGTGGCAGACATACCTATTTATGGTAGTTGCCCAGAGTGTCACATGACCTTCTCCAATATactacaatataataaacattccTGTGCCCACGTCATTAAAAAGCGACGCGGTGTTCGCTTATACTGTGAAATGTGTGGCTTAGAATTTCCTTCCTGGAAACGctttaattttcataatcaATTCCACTTGGAGCGGCACAGACCACGTGCCTGTTTTGTCTGCAGCTATACGGATACAAACATTGACGAACTTTTCCAGCATTTGCATTATGCACACGAACCGGAAGGCACGCTTTTCTGTGATCTTTGTGACCGCAATTTCCGGGACCCAGCTGTGTTTGCGGAGCATAGCAAATCGCATGCGAATGTCAGCAGCACCACCTTCAGCTGCAGCGAATGCAATTCCATCTTCGAAACACGCGGTCGTCTTAACAGTCACATGCGGTCAACACATGGCACTGTCATCAGCTGTGAGCTGTGCTCTCGCGAGTTTGCCACAGAGGTTACCTATAATATACACATGAAGAAGCACTTGATTATAGAGCGTGAGGTGCACGTCTGCTCCAATTGCGGCATGCTTAGCGAAAATCAAGAGAAAATGGCGTCTCACAGTGAACAAGAGGATACGTCTTGTTTTGGTGCTGAAATATATGTGGAATTGCTACGTGATGCTTATGTGTGTGACTATTGTTCCAGTTACTTTAAGTCTAAAGAAGATTTGCGTGCCCATCGCGATTCGGATATACATAAGGATGGTCTATTTTGGTGTCAACCATGTGGCAAAGAGTTTCCAGAAATGAAACTATATCGTCATCATATGCGAAACTTCCAGCAACTGCGCTCAGACGTAGCACATCGCAAGCTAGAGATTTGTCTCTATTATATGTGTGACTTTGAGGATTGCTCAGAGGCTTATATCAATTGGAATTCattgtacacacacaaacgccgCCAACATACCACAGTGGCTAGAGAAACGGCACAATCCAAAGAAATGGAATGGATCTGTCAATTTTGTCAGAAACTTTGCCGTTCCAAAATGTCACTCTCGGTGCATGTGGCACGTAGTCATAATAATAATAACGTTGTGTGTTTGGAGTGTAAATCATCCTATAAGGATATGGAAAGTTTGGAAAAACATCATGCCTATTGGCATGTAGCAATGGAgtgtaaaatatgttttaaaatgGTGAAAAATCGACGTAATTTGGACACCCATATGAATGTGGTGCACTCCAATAATAAACGATATACATGTGATGTTTGCGAAAAAGGATTCTATCATAAAAGTGAAATGGAAGCTCATCGCTCGTTACATTCGCAATCCTATAGCTGTGAACAGTGCAGCTTTACCACCAGGAACAAACACTCGCTCTCGGTGCATGTATTGGGACAGCATTACAAGCGTTTTGCGTTTGAATGCAAAGAGTGCAAGAAGACCTTTGGACGACGTCAAGGACTAACCAATCATATGAAACGTTTGCATGGCTCCAAGTTAACCTGTCGTGATTTCCTTGATGGTGGCTGCACCAAGTACTTTGCCACAACGTTGCAGCTGAGCGTGCATGTACGCAAGATGCATAACAGTAGCATAGAACTAACTGATATAGCCAATACCAATGAGGATTTAGCTGTAGAATCTGAGGATGGTGCAACCACATCAAAGAAACGTTGCATACGTCTTAGTGATGATACACAAATAGAATTTATACACGATGATGAagctgatgatgataataatgttaacGATAACGATGAGAACGATCCCGATGACTTTATGCCAATTGCAGAAGAAGTCAAAAGGAAAACTGCTCAAccaaacacaaagaaaaagcaacgaaaaaattaa
Protein Sequence: MSQNIMKSKETEPSCLHCRVHDSKLEYQEIFDELGVEIELPELLAKYFQVHVKPDPNQSQLLCLECVNTLIRFFDIDELQREQDAANATKKNLGNQQKIVVTTPTPSPAPAPAPVPTVETKKNEKPNAIKKATPPKEQKGAKTVQAPTKKLTAILKVDKPVPITKVPVPAPLPKQRLEKTPEPLPKRITRGKSAVVTAKPLPVKSKEAVKVAVKTRSSKDAVPAEQEQFSALIRDILEDGETPPDAKFVEAAATVRQLDTQTDAEQEQLQESVVELDQVELDEPEAHEELEFLLESEDEHSDSDVSHFKVSKKRKRVRSQSHNESQSEDESLKVEPFNFVLIKESDNIGDLYEYLDTVVKTCFESLTFDWATVCRHCSVKFTKYENMLKHMIRRHKLPGEQYKCPIEGCTAEVQGNKSLAMHLVVLHSPVADIPIYGSCPECHMTFSNILQYNKHSCAHVIKKRRGVRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCSYTDTNIDELFQHLHYAHEPEGTLFCDLCDRNFRDPAVFAEHSKSHANVSSTTFSCSECNSIFETRGRLNSHMRSTHGTVISCELCSREFATEVTYNIHMKKHLIIEREVHVCSNCGMLSENQEKMASHSEQEDTSCFGAEIYVELLRDAYVCDYCSSYFKSKEDLRAHRDSDIHKDGLFWCQPCGKEFPEMKLYRHHMRNFQQLRSDVAHRKLEICLYYMCDFEDCSEAYINWNSLYTHKRRQHTTVARETAQSKEMEWICQFCQKLCRSKMSLSVHVARSHNNNNVVCLECKSSYKDMESLEKHHAYWHVAMECKICFKMVKNRRNLDTHMNVVHSNNKRYTCDVCEKGFYHKSEMEAHRSLHSQSYSCEQCSFTTRNKHSLSVHVLGQHYKRFAFECKECKKTFGRRQGLTNHMKRLHGSKLTCRDFLDGGCTKYFATTLQLSVHVRKMHNSSIELTDIANTNEDLAVESEDGATTSKKRCIRLSDDTQIEFIHDDEADDDNNVNDNDENDPDDFMPIAEEVKRKTAQPNTKKKQRKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -