Basic Information

Gene Symbol
Hivep2
Assembly
GCA_037044455.1
Location
JBAMBS010000851.1:75658-84364[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 4.7e-05 0.004 17.8 0.8 1 23 427 449 427 449 0.98
2 8 4e-06 0.00035 21.2 1.5 1 23 455 479 455 479 0.92
3 8 0.0021 0.18 12.6 0.2 1 19 1158 1176 1158 1179 0.93
4 8 3e-06 0.00026 21.6 2.0 1 23 1948 1970 1948 1970 0.99
5 8 1.3e-05 0.0011 19.6 5.3 1 23 1976 2000 1976 2000 0.92
6 8 2.8e-05 0.0024 18.5 2.6 2 23 2462 2483 2462 2483 0.97
7 8 0.00088 0.075 13.8 1.2 1 23 2489 2513 2489 2513 0.91
8 8 0.0028 0.24 12.2 2.7 1 23 2534 2558 2534 2558 0.92

Sequence Information

Coding Sequence
ATGGaaagtgcaacaacagcagcaacagcaacagcaacagcaacagcagcaacaactacagcgaAACATTATAAAACAGcgacaaataaacaatataaaaataataaattaaatagcaGCACGCGACGTGGAatagcaacagcggcagcagcagcaacggcagctgcagtaacagcaacaacagcaactaagaAGCAAACATATCGTAGCAGCAACGAcatagctgcaacaacagcaacaacaactaataaaataactaGCAACAAAGTCAATaacaaaacgacaacaacaacaacaacaacagcagcaacagcaacaacagcagcagctgacaACAAATCTAGTACAAGCACACGAGATAAACTCAACGAGTTGCCCGTTCAAATTgctgacagcaacaacagcaacaacagcaacaacacaaccaacaacaacaacaaccacagtgATAATAGTATTAGTGAGAATAATTATGAATTTAAGGTTAGAGATAAAGCGAACCTAAGTGATAGCAAAATGACGCTACAACATGTGGCAAGCAGCGCTACTTGCGttgcaacaaccacaacaataacagccaccaccaacaacaacaataacaacaacaacagtaataataataataatcgctTCGATGATCTaaacagagcaacagcagcagcagcagcaacaccaacagcagcagcaacaccaacagcagcagcgacagcaacagcaacaattgtcgATTGgacaaattcaaataatttgcgttatttacataaaaaatttaaacgttTGGCCAGCACCACCGAAAGTGGTGAAACTGCTGATCCACTGCGCAGCTCATCGTTGTCATCCAACAGCTCCTTATCGCCGCCAccgccaacagcagcagcaacagcagcaacagtagtgccaacaacagcagcagcagctcaactAGCAGTAGTCAATGGACATGCAATGTTGCAGCCGAACGAATTcagtgccaacaacaacaacagccatgaagagagcaacaacaatagcaaaaatgtGGCTGTTGCTATATTGCCCAGAACACGCACACCCttaaccaacagcaacagcaacagcaatagcaacagcaacattaatagTAACTATGCCAGTATTGCAACATTATCGCCAGCAACATTCgcacagcatcaacagcaaacgCAGCCAACGATAGCAACAgttactacaacaacaatagcaacaccagtaacagcaacaacagcagcaacagcaccaacagtagcagcaacaacagcaacacctaCCGAAAAGCCTGGCTACATCTGCCCCTATTGCAATCTGAGCTGCTCCAAGCCATCGGTGCTGCAGAAGCATATACGCGCTCACACCAATGAGCGCCCCTATCCCTGCAATACCTGCGGCATTGCCTTCAAAACCAAGAGCAATCTCTACAAGCATCGCCGCTCCCGCTCTCATGCGGCGCGCCTGCGCGGCTACGATGTGCCCGCCCATGAGGCCGATGGCCTCTCCGATCAGGATGGAGATGGTGAgctgagcaacagcagctccgAGCTCTTGAGCGTGGAAATTCTAAGTCGTGCGGGTTCTCCATTCGATGAGCCAATGTCCTCACCCACGCCCTCGCCCTCCACATTGTCCGCTGCCAAGAGCGCCTATCTGCAGCACATGCAACAGTTGCCGCTGGGCTCACCAGCCGCTGGCACACTACCACCTGCCACAGCCGACACGTTGCACTCGGCCACAGCGCAGCATCGGCAATCGATTGATTATAAGCCATATAAGCCGAAGTTTCATAATGCAGCGCTCTATGTGCCTGTTGGTGGCAgcaaggagcaacagcagcatcagcagcagcaacagcagcagcaacaactgcagctacagcaacaacagcagcagctacagcaacaacagcagcttcagcatcagcatcaacaacaacaacaacagcagcagcagcagcagcagcagCAACCATCGTTGGCGCATCCCACGCTGTCGCCCAGCACGCAGTTAAAACTGAACAATCACATTAACTCGCATCAATTGCacttacaacaacagcagcagcagcaacaacagcagcaacaacagcagcaacagcagcagcaacatctgcATGCACAGCAATCATTGCTATTggctgcagctgttgccaaTCCCGCAGTGCTGCCCGGCCTGGTGCCACCAACACAGCTGCCCACTGGTGTCTACTATATGGGACCGCAGCCGCAGTATTATTCGAGTGCAGCAGCAATGCATCAGCATGCTTATGCCATacagcagttgcaattgcagcagcattttcagctgcaacagcaacagcaacagcagcaacatcaacagcattcACCCTTGCTGAAGGCACccccacagcagcaacagcagcagcagcagcaaccattgccattgccaccagcgccacagcaacaacagttgctgcgtGCCAATAGTCAACAtgtgccagcaacagcagccgtgCTGCCAGCacctgccacgcccacacccAGTGCCAATTTGAGCAGTTTTGCCAGTGCCAGCGGCGGCATGCAAGTGAATGTCGAAAAGGTGCAGGAGCACATCTCAAAGCTGATCTCACAGAACGAGGCCATAGTGGAGAATAAGGAGATATTATTGCAGAAGAAGTATCCAAAACAATTGAATCGTTCGCGTAGCTTtaacaacgccaacaacagcagcaacaacaacagcaacaacagcaacagcaacaacagcaacagcaacagcaacattggcaGCAATAGTTTAGCTGGTGGCAGCATTATGGcaggcagtagcagcagcaatagtagcagtaacagtgCAACAGCTCAcggcaacatcagcaataaCATCGGCAACattatcagcagcaacagcaatcagcCGCTGGGCGAGGCGAAAGTTAATCTGGCACAGGCCATAgtacaaaagcaacagttgcagcagcaattgcagcaacagcaacagcaacaacagcagcagcagcaacaatatcatcaaatatttatgcaacaacagcagcagcaacagcagcgcatcaccagcagcggcagcagttgcagcagctctAGCAGCGGCTATGTTAGCCTTAAAGGCACGCCCACACCGCCCATACtgaacacaaacacaaagctGCAACAATTGCCGCCACCACCCTCCCCATTGCCGGTGCAAACAATGCAATATCGCCAAGATCCAGCAACACCCTTGCCCAAATTGGagtcacaacagcaacaggcaacgAATCACGTGCAACCACTCAACTTATCCGCCAAAGCAGCTAAGCAACAACTCCCACAAAAgcccataacaacaacaacagcagcagcagcagcagcaactgtggcCACACCaccagctgttgctgttgcagttaagagcacaacaacagctgctgccgcaGCACCAAACAATTCAATCATCAAAAATTTACTACTCAATGCACGCGGCCTGGCAGTGCCCATTGGCGAGGGCGATGATGCCGTCTACTCCTGCCCCATTTGTGCCACAGAATTTCGCAGCGCGGACGAGCTGAAGCACCACAACAGCACCTACTGCCAGGACGCCAGCAGCAGTGCGCCCATCAGCCCTGCCTCGTCGCCAAGCAGCAAGTACTTTCGCTCCAATTCCATATCGTTTAGTCTGCCCGAGCTGAAGACGCACATGGCCAACTCCAAGAATCCTTTATCCTTGGCCAAACTCGCCTGGTCTCAGCTTAAGACTAAACCTAGTAGCTTAGTCTTGAGTCGCCTCAGTGCGGCACAGAGTCCAGCACGCACTTCCACTTCAACagccaccaacaacagcagcagcgccagcagcagcagcaacagttccAGCAACAATATgacacacagcagcagcagcaataacttagcagcagcagcagctttgcCGCCAACTATTGATGCTACCAATGTTGCCCTACGCTTTGTGGATGCTCCCTTGCCCTCGCCAGGTCCACTGCTAGGCAAGACGCCGCTGGTGGACTATGCAGCACCACGCAAGGCGCCCGATGCTCAGGTGGTCATCACCAAAATGCACGAGGATCGCCTGGAGAACATCATCATTGAGACGCCTGTAAAACGTGCCAAGCTGATGGGCCATGAActctccaacaacaacagtgggAACAGCTCTGCCTTTGCCTACAGTGGACACCAGGAGCTGCCTTCCGCCAGCAGCTACAGCTCCAAGGATAAGTCGCTTAGCCGTTTCACCACTTCCGGCGGCAGCATGATACCCATCTCCGAGTGTCCCGAGCTGAATAAGAGCCCCAAAATGATACGCACTCCTCTGCTATCTGGCGGCAGCTTCCAGGAGGTATCACCACTCGTTGGAGACTCCAAGGAACGCAAGCTGACCGCCAACAACAATGGTTTCTTGctcggcaacagcagcagcagcagcactgcaCCACAACACTTTCAGTTTCCGCCCATTAACTCCATCACTGGCTTCAATCTATTGACCATGCCGCCCATGCTCAGCGCCAGCAACCATCTGCCAGAGCCCAGCAAAGCCATACCCTATGTGCCGGGCATACCTGGACCAGGCAGCTTAAGCTTGCTGCCGCCGCCACCACAGCAATTGCAGCTGCCTGCAGCAACACGTAGACGTAGTCCGAATCGTAAGCAACCGAGTCCCAATCCATTGCTGGCAGTAGCAGCTGTGGCTGATGCGCCACTCAAGGCGCTCTCTCCGTTTGGTGGTGTGCAGAATTTGCCCAGCGAATTCAGTCGCCAGCCGCCGACGCCAGCACAACGCAATGCGTTGCAatggaacagcagcaacaacagcaacaagacaCCAACATTGCTggctgccacagcagcagcaacagttgccggCTTGGGTATTGCCTCTGTGGATGCCCTCAACAAGAAGCTGCCATTCAATTTCCTGCGCATGGCGGATAATGTCAAGGATACGCCGGAAGTGCGTCACTTCAATTTTGATAATGTGAATAAAACGCCGCAGGAGGCGCTGGCGCCGTTGCATGTTGATATGCCAGCAGaggacagcagcaacagctcgcctacaacagcaacaacaactactacaacagcagcagcagcagcaacaacaacaacagctgcttcAAGCAGTGCCAAGTCCAAGTTTCTACGTCCCACCAGTCTGCCCCTTAAGCCGGGCACCTTCACCCCGAAGCGTCATCATGGCATCACGCCCACCGCCAATACATTGCCATTGATCTCACCGGAAACGCCCCGCCCCTCCAAGTCGTGCGTGCAACTCTATCTGAATGGACACGCCTACACCTATCTGGGTCTCAAGTGCAGCACCAAAATGTTTTACTGTACAGTGAACTGTCCGCAACCCTCGTATGTTGCCGGCATGCACAAGCTCTCCATGTACAGCGTCTGGCAGGTCTGTGAGGAGAATCAGCCGCATCCCTTGGGCCTTAAGCCCAGAGAAGTGATGGCTCTGTATGATTCAAGGCAGAAGCTGCTGGGCAGCGGCAGTGGTAGCTCCATGGCCATGGCTGGTGCGGATAAACTGCAGTATACTGTGGTCAGTTCACAGCAAACGGTGAGCACTTGCTCCACCCTGGCCAATGGGCAGAGTAAGTACTATCAGCATCAATTGAAGCagccagcagcagttgctgcattgacagtaacaacagcaacagcagcagcagcaacaggagcaggaGGAGCAACATCTATTGGTGCCTTGAGTGAGGCAAATGTTGCCGCCAAGGCCAATGAGgaggaagcagcagcagcagctgcagcagcagccaagaAATTGGAGTCGGGACAACTGCTGGTCGGTGGCTATGAATCGCATGAGGATTATACCTATATACGTGGACGTGGGCGCGGCCGTTATGTGTGCTCCGAGTGTGGCATACGTTGCAAGAAGCCTTCGATGCTCAAGAAGCATATCAGAACGCATACGGATGTGCGTCCATTCACCTGCAGCCACTGCAATTTCAGCTTCAAAACGAAGGGGAATCTCACCAAGCACATGCAATCGAAGACTCACTTTAAGAAGTGCTTTGAACTGGGCATTAATCCAGGTCCCATGCCGGCGGATGGCGAGTTCCTTGATGTGGATGTGGAATTCGATCAGCAATCATCAACTTCGGCAGGTGGACGGACTTCTTCCATGGCTGGTGAATCAGATTCTGATGATTTCAGCGATAATGAATCCGAAAGCAGTGACACAGATGAGTCCAAGTCACGTCTGAAGGAGCATGAGGCAGCACGTGGCCTGTTGTCCTTGTCGATGACACCACCAATACCACAAAGTGTTTCACCCTATCCAGCACAGGTGCCGGATACGCCCGTGCCAGCTGCAAGTCCAGCCAATAGCATTGGCTCCTcggcaggcagcagcagcgctgcTGGCGGCTCACAGCCTAAGCGTGGCGTGGTGTGCTCCTTTACCTCACCCAAGCCACCATTCGACTACCAGAAACAGGAACAGTATTATTCCAATCCTGAGGAGTCAAAGCCCAAGCGTAATGCACCCAATGATGAGAGCAGTGCACCCATGGATCTAACCAAACCGCGTTACTCTCCTGCCATGCTGCCAGCTCTGCCCGCTGCCGTTGAACAGACACCCAAGTCACAGGCACAGCAGATGCGCGATGTCATCTTTGGCACTGGCAACAATGAATGTGGTGGCTTCATGAAGACGCTCATTTCGGTCTCCGACAAGGTGCGCATCTCGGCCGAAATGGAGGAGCAGGCGAAGCGTGAAAGTGAAGGCGAGGATGTGCTGCTGCAGACCTACATTAAGGAGCAGGCACTGCAGTATGCCAAGATGAAACAGAGCCAGTTCAGTCGCAGTTACCTGGGGACTAGCAGCAGCTCCAGCGtcatcaccagcagcagctccatAGCTGCCTCTATGGTGGTCAGCAGCAGCTTGCCCAAACAGCCCATGGTTATTACTGAGGTGCCCAGCATTGAAGTGCATGAGGTGAAGACGCCAGTGGAGGATGTTAACCCTATAATAGTTCccacagcaacagttgctgccaaTGCTGTAGAAGATCGAGAAGAAATGGAAACACAAACGGAGCAAGAGAAGCTTCCAGTTGTGGTTAGCATTGAATCTAAGCCACATAATGCCAATTTGCCAGCTGCAGTGCAGCAACCAGATGCCACAGATTTCAGTGGTGTGCTCAGCAAccacaagagcagcagcaataatacagcaacagcagcaacagctgcagctgccacagcaacacgcactgttattgttggtgaGGAGCGTCTGAAGGCAACAGCTAGCAGCAGCTCCGAACTGCAACCAGTttctgctgcaacagcaacagcgacagcagcagctgcagctggtaGCTATCCAGCACGTGTTGtggcaccaccaccaccacccacAGGCGATGCACGTCCCGTGTGCAGCGTCTGCAACAAAACGTTCCAGCGGCAACATCAATTGACGCTGCACATGAACATACATTATATGGAGCGGAAGTTCAAATGTGAGCCCTGCAGCATATCCTTTCGCACGCAAGGACATTTGCAGAAGCATGAACGTTCCGAGGCGCACAAGAACAAGGTTATGATGACATCCACCTTCGGTGTGCCCACCACATCGAATCCGCGTCCCTTTGAGTGCACGGACTGTAAGATAGCCTTTCGCATACACGGCCATCTGGCCAAGCATTTGCGTTCCAAGACGCATGTCCAGAAACTGGAGTGTCTACAGAAGCTGCCATTCGGCACCTATGCAGAGATCGAACGTGCTGGCATCAGTCTGACGGAGATCGATACCAGCGACTGTGACAATTCTTTGATATCCCTCAAGCTGCTGGCACAGAAGCTGCTTGAGAAAGATCCCAATAAGCTGAGTAGCTATACTACGCCATCGGGCATGCTGCAACTTTCCGCGGATACACCAGCTGCTGGCCAAGACAGCGCCTCCGAGGATGGCTTCAGTGCAGCCAATAGCGCTGCTGCCTCAGCCATCGCCTCGCTGGATAATGACAGCGCTGGCAATACACCAAAACGTGCCAGCTCCATGTCCGAGGATGAGACACTTGTCAATGGCCTAagccacactcacacacatagctTGAAGCGTCGTCTGCCTGGCAGCAGCTTCAGCAGCAACGGCGACGAAAGCGACAATCCACTGGAGGGCAACGAGAAACGTGCCCGCAGCAACACAAATGAGTTGCCATTGCCCGTGCCTGTATCCACAGCACAGGCAAGCAACTga
Protein Sequence
MESATTAATATATATAATTTAKHYKTATNKQYKNNKLNSSTRRGIATAAAAATAAAVTATTATKKQTYRSSNDIAATTATTTNKITSNKVNNKTTTTTTTTAATATTAAADNKSSTSTRDKLNELPVQIADSNNSNNSNNTTNNNNNHSDNSISENNYEFKVRDKANLSDSKMTLQHVASSATCVATTTTITATTNNNNNNNNSNNNNNRFDDLNRATAAAAATPTAAATPTAAATATATIVDWTNSNNLRYLHKKFKRLASTTESGETADPLRSSSLSSNSSLSPPPPTAAATAATVVPTTAAAAQLAVVNGHAMLQPNEFSANNNNSHEESNNNSKNVAVAILPRTRTPLTNSNSNSNSNSNINSNYASIATLSPATFAQHQQQTQPTIATVTTTTIATPVTATTAATAPTVAATTATPTEKPGYICPYCNLSCSKPSVLQKHIRAHTNERPYPCNTCGIAFKTKSNLYKHRRSRSHAARLRGYDVPAHEADGLSDQDGDGELSNSSSELLSVEILSRAGSPFDEPMSSPTPSPSTLSAAKSAYLQHMQQLPLGSPAAGTLPPATADTLHSATAQHRQSIDYKPYKPKFHNAALYVPVGGSKEQQQHQQQQQQQQQLQLQQQQQQLQQQQQLQHQHQQQQQQQQQQQQQQPSLAHPTLSPSTQLKLNNHINSHQLHLQQQQQQQQQQQQQQQQQQQHLHAQQSLLLAAAVANPAVLPGLVPPTQLPTGVYYMGPQPQYYSSAAAMHQHAYAIQQLQLQQHFQLQQQQQQQQHQQHSPLLKAPPQQQQQQQQQPLPLPPAPQQQQLLRANSQHVPATAAVLPAPATPTPSANLSSFASASGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNSSNNNSNNSNSNNSNSNSNIGSNSLAGGSIMAGSSSSNSSSNSATAHGNISNNIGNIISSNSNQPLGEAKVNLAQAIVQKQQLQQQLQQQQQQQQQQQQQYHQIFMQQQQQQQQRITSSGSSCSSSSSGYVSLKGTPTPPILNTNTKLQQLPPPPSPLPVQTMQYRQDPATPLPKLESQQQQATNHVQPLNLSAKAAKQQLPQKPITTTTAAAAAATVATPPAVAVAVKSTTTAAAAAPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICATEFRSADELKHHNSTYCQDASSSAPISPASSPSSKYFRSNSISFSLPELKTHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSPARTSTSTATNNSSSASSSSNSSSNNMTHSSSSNNLAAAAALPPTIDATNVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAPDAQVVITKMHEDRLENIIIETPVKRAKLMGHELSNNNSGNSSAFAYSGHQELPSASSYSSKDKSLSRFTTSGGSMIPISECPELNKSPKMIRTPLLSGGSFQEVSPLVGDSKERKLTANNNGFLLGNSSSSSTAPQHFQFPPINSITGFNLLTMPPMLSASNHLPEPSKAIPYVPGIPGPGSLSLLPPPPQQLQLPAATRRRSPNRKQPSPNPLLAVAAVADAPLKALSPFGGVQNLPSEFSRQPPTPAQRNALQWNSSNNSNKTPTLLAATAAATVAGLGIASVDALNKKLPFNFLRMADNVKDTPEVRHFNFDNVNKTPQEALAPLHVDMPAEDSSNSSPTTATTTTTTAAAAATTTTAASSSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGLKPREVMALYDSRQKLLGSGSGSSMAMAGADKLQYTVVSSQQTVSTCSTLANGQSKYYQHQLKQPAAVAALTVTTATAAAATGAGGATSIGALSEANVAAKANEEEAAAAAAAAAKKLESGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCFELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGESDSDDFSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPYPAQVPDTPVPAASPANSIGSSAGSSSAAGGSQPKRGVVCSFTSPKPPFDYQKQEQYYSNPEESKPKRNAPNDESSAPMDLTKPRYSPAMLPALPAAVEQTPKSQAQQMRDVIFGTGNNECGGFMKTLISVSDKVRISAEMEEQAKRESEGEDVLLQTYIKEQALQYAKMKQSQFSRSYLGTSSSSSVITSSSSIAASMVVSSSLPKQPMVITEVPSIEVHEVKTPVEDVNPIIVPTATVAANAVEDREEMETQTEQEKLPVVVSIESKPHNANLPAAVQQPDATDFSGVLSNHKSSSNNTATAATAAAATATRTVIVGEERLKATASSSSELQPVSAATATATAAAAAGSYPARVVAPPPPPTGDARPVCSVCNKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCDNSLISLKLLAQKLLEKDPNKLSSYTTPSGMLQLSADTPAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPKRASSMSEDETLVNGLSHTHTHSLKRRLPGSSFSSNGDESDNPLEGNEKRARSNTNELPLPVPVSTAQASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-