Basic Information

Gene Symbol
hang
Assembly
GCA_037044455.1
Location
JBAMBS010001983.1:59589-71027[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.38 33 5.5 1.0 3 23 503 524 502 524 0.93
2 18 1.1 94 4.1 3.2 3 22 631 650 629 650 0.89
3 18 0.00082 0.07 13.9 3.3 1 22 748 769 748 771 0.90
4 18 0.094 8.1 7.4 0.1 2 21 783 802 782 803 0.93
5 18 0.00095 0.081 13.7 0.2 2 23 932 954 931 954 0.95
6 18 0.0027 0.23 12.3 0.1 1 23 962 985 962 985 0.96
7 18 6e-05 0.0051 17.5 0.2 2 23 1072 1093 1071 1093 0.97
8 18 0.00039 0.034 14.9 2.9 2 23 1205 1227 1204 1227 0.97
9 18 0.031 2.6 9.0 0.2 2 23 1236 1258 1235 1258 0.95
10 18 0.00061 0.052 14.3 0.2 1 23 1271 1294 1271 1294 0.97
11 18 0.00017 0.015 16.1 1.1 1 23 1341 1363 1341 1363 0.99
12 18 0.0027 0.23 12.3 0.9 1 23 1371 1394 1371 1394 0.96
13 18 0.068 5.8 7.9 0.3 2 19 1402 1419 1401 1420 0.94
14 18 9.8e-05 0.0084 16.8 0.4 3 23 1527 1547 1526 1547 0.98
15 18 0.0014 0.12 13.1 0.1 1 23 1582 1604 1582 1604 0.97
16 18 0.00081 0.069 13.9 0.6 2 23 1686 1708 1685 1708 0.93
17 18 0.013 1.1 10.2 1.1 3 23 1764 1784 1764 1784 0.98
18 18 9.2e-05 0.0079 16.9 2.1 1 23 2357 2379 2357 2379 0.99

Sequence Information

Coding Sequence
atgaACCCGAAACTCGTTCAGGTCCAAGATCATGCGGCGTTGCTGGACATGCTATATGGCCTGAGAGTTTTTAATTCTGGTCAGCATCACAGCCTTTGTGCCTTCATGGCAACGTTATtgaTAACCCCTCTGGATCGCCTATCGCTGCATATTTGCCATGCCTGCATCAGTTATTTAAACTCTTGGCAGAGTTTCAAGAATCGATGTCTCAGCTCCCAAGCAAAGCAGCGTCAATGGCTGGATACGGATAAAGCCAAACAGCAGACATTATTGGGATATTTGGATTTGAATCGTGCCGAAAATGGTGGCGGTTCCAATgaccatcagcagcaacaatccgAATTAAAAACTGATTCTTCGTTGACTGCTGCTGAAAAGGCAACTGCCGCCAACATATTGGATGGCATACCAGCACTGAAGAAACGCAAATCTTTAACAGTTTATGTGAGTCCAAAGCAACAGCCTCAACAgctactgcaacaacaacaacttcaacaacaaaaacatcaacaacagcagcagcaatctgCAACTAGAATGATAAGCGCGGCGGCAGATCCACAGCAGAAATTGCATACACTTTTATTACAGGTGCCcccaaaggcaatggcaacgacGTCGTCACAGCAACACCAACGTAAatttcagcagcaacagcaacaacaacaacaacaacagcagcagcagcagcaatatcaacaacgtggcaagcaacagcatcattatcatcatcatcatcaccatcagcaacaaaataaaccacaacaatatcaacatcaGCGACAGAAACGTTTTCGTCAAGAGCGACGTCAGCAACATACGATGAATGTACAGCGTTTATCCAAATTTAAGTCGAAATTTTATATGCCCTTAGATATAACAGTTCCAGCGTTTCCAACATTGCTGCCGCCAATGCTGCCACATGGATTATCAACAgtatcatcaacatcaacaacaacagcaacaacaagtgcatTAACAAATCTTACTGGTGTTGCTGAGACAGCGACGTTGCCATTGACGTTGTCGTTGCCATTTGATAAAAGCCATAACCAAAATCATAATCAAAGTCTGTGTCATAAACACAGCAGCGTCTTGCCGCCGCCGCCAACAACATATCCTGTTGCAACAGTGACCAGTAACGccgctgcaactgcaactggcgCTGCCGCTGCAACTGCTTTTAAAACTAGCAATGCATCTAGCACAATTGCAGTCGCACAGACACCACTGCTCATGCCGCCACTGCCAGCTGTTCCTATCAAAGATGAGCCAATGGATGATACGGATGATGAttatcaaatgaaatgcattgaTGAATCCGATGATATGATGGATCCAACAATGTTCCTAGAACGCTCTGAGCACGAGGGTGATGTGCCACTAATGACCTCAGATTATGATTATACTGCTCAGCATGGCGTAacagcagttgctgcagctgcaacattgcCACCAAATGCTGtggcaaatgttgctgctgctggtgactCAAAGGTTGCTAGCTGTCGTGCCTGTAGCCTACAATTCTCAACAAGAGCAAATGCACGACGTCATGAACGTAATTTACATCCGAATCTATTTCAATTATCAACAGATTCACCAAATAATACACCAATAACAAAACCAACACCAGCCTTAGCGGCTGCATTGGAAATACAAcgtgctgctgcagcagcagcagctacagcagaaGCAACTAAAGCAGCAGCTGGTGGCAATATATCAACGCAAAAGTATAGACAAGTTGTTAtgaatacatttattaaatgtgAAAATGGTGGATATGATTATGATCAACCGGAACAGTATCAACAATTGTTAACGCGTGACAAGGTTGAATTTTTACAACAGAATAGCGAATTTCTGGAACAATATCAAACGATGACCTGTCGCTgctgtaataaatattttaatacatataaaaattttatggcaCATGTACGTAAAAAGTATCCATTATTACCACGAAATTTATGctttaattgcttaaaaatgaATGATTCAAAGGCATTATTTATATCGCATCTTAAGAAAAGGAATTGCATCAATTTGTGTCGCGTATTGAATGCAATTCGTGtcaagcaaccaaattttttatatgctactGGTAATGGTACCATTTCTACAACTGAAGATCAATTGTTATtgtcatcagcagcaacaacaccacatGAGAATACATCATCAACGGATAGGCCAGAGAAATTGCGTGCCAAGGAATTGCTTGTTAATAAACTATATGAATGCAAGCTTTGTCCAAAGGGTTTTCGTACCAAACATGAATTCCGTACACATGTCTATGATAAGCATGCGGATGTACAGCGTAAGGATAGCAATTCGATACAGTGTAGCTTTTGTGGCTTAGATTTTGCCGATCCTGTAGATCGACGGcgtcattataataatatggaTTGTATTGTACGATTACGCTGTATGACCTGTGATGCCAAATTGGAGACGCATCAACGTTTTCTAGATCATGTCTATCAGGATCATTTGGGCGGTGTGAGTAGTGATCATGCGAATGTAAATAGTAGTATGGATCATTCACCTGGCAAACGTAGCCTATTGGGTGCacttggtattggtgttgagCAATCATCAAATGATGAATCCCGTAGTagtagcaataataaaaataattctaatGCTGCAGCTACTGGTGGAACACCACTTACATCAACGCCAAAGGTAACAGGTggagctgccgctgctgctgctgctgctggaggaACAAACAATACTAATCGCGATGCACCAAAGTCACAATATTTTTCACGTATGCCACAAGTATGCCCAATCTGTGGACAACagtacaataattataataatgttcTACGTCATATGGAATCAAAGCATCCAAATAAATTACCCGAAACCTATAAATGTGTACGTTGCGGCTTAGGTTATCCACGCATCTCATATTTGCGTGAGCATATGATAAATGTACATGGCGTGGATAAAAATCGTCATTCTGGTGGATTTGAATATATTGTTAATGCGGATGCAGTTAAATTGGCTGATGGCAGTATACCCAATGTTTATACGGGACGTTATGATTATGTGATGAAGGATTTAATGTCTATAACAAATGGTGGGACAATCGatgatgatgacgaggAGGTCAGTGGAAGCATTGCCAAAAAGATGCGTTTAgatgacagcagcaacaatagcagcgtTAATCTAAGCATTGCCAATCAACAAAAGGAATGTCCCATTTGTAATTCGGTTTTCAGTAATAATATTGGTTTATCCAATCATATGAGATCACATTATACTGCTGCACTTGCTGCTGCCAATCGTATGACACCAAAATCATTGACAATAACAGCAACGCCACCATTGGATGCCACAGCGGCAACAACGAGTAATAATGCATTGGCAGCaagtgcagctgctgcaacgacagctacaacaacaacagcagcaacaacaaatacaacaacagtagcaacagctgcagttgctggcGGTGGtgttacaacaataacagttggTAAATCATCTGGCAGCTTGCCGCCAGCAATGGCAAATCAAACGCCACAGGAACAGGCTGTATTTCGTCGTAGTTTGGATCAGGCGGCGGATCGTCGTTTCCGACGTATGCGTTGTCGGATTTGTCAGCGTAGATTTAGCTCAAAGAAATCATACCGTTATCATATGCTAACGGATCATCAAGTACAAAATGTACAATTCATCAAATGTAAATTATGTAATGCTGAATTTGCATATGAGAAGGGTTTAAAGGTGCATCTGTTTAAGGTGCATGGACGTGCCATTAAGGATGAAAtgattataaaacaatttgaatgCGATATATGCTCAATTGTATATAGCTCTGAGATGGAATTACAACAACATAAACGTAGTGTACATAAATCACAAATTGGCAACACTACGCACAACAATAAGTCAACATCGAAAAATGCTACAGCTACCTCTGATGGCCTGAACGCCTCCGATACAACTGGTATGGGcggagcagcagcaggcagttCATTACCACTCTATTGGTATCAATGCAAGTATTGTCCATCCAATTTTAATACCAATAAGAAGCTAGCCATACACATTAATTCCCATGATGAGTTCGACTCAAATGATTATTCCTGCAAGGATTGCGGTAATGTTTATAGTGGACGCAAAAGCCTTTGGgttcATCGTTATAAGAAGCATCCACAAGTACCAGATCCCGTGGAGTGTACACTTTGCCGTAAAATGTTCTTTGATCGTCAAATGCTGGAGAATCATACACCAACCTGCAATCGTAAACCAATCACTGCCACTGGGGCGCATCAGCAAGATCATCAACAGCAGTtgcaaatgcagcaacatCGTGGTATATTCAAGCATAAAactggtgatgatgatgacgatgacgaggATGATGATCAACTATTATTGTTAGACgatggtggtggcggtggtggtggtggaggtggAAGTAGTGGAAGTGTTGCTGGTATTGGTAATGATAGTAATGGTACTATCAATACAATACCAGTAACAAGCAAcatcaaaacaaacacaattaATACAAGCACATTAAAAATACGCATTCCAGAGGTTGCATGCACCATTTGTGGTGCACGTTTTACAGATCAAGAGATGTTTagtaaacatatacaaaaacatgAACAAGATCTATATGTGGATAATCCATTGGCAGCAATGTTCGATGATGGTCCAGCTGATGCTGGTCAATTTCAGGTGGAGcgtcaaaatgaaaatggcgaATATGCGTGCGATTTATGCACAAAGACGTTCCCCCAGGTGATTGCACTCAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGaatCCTATCATCGACGGCGAAGCGACGTCtctgaacaacagcaacaacaacaacaacaacaacaattcgtTGAGTTCATCATCGATGCTACATCTACGCGAACTCCATGCAGTCGGATTGATGCCCAATCAACagcaccaaaaacaacaacaacaacagcaacaacaacaacagaattcATCGAGCTCAGCAAACAAATCGATGAAAAGGAAACGTGAACTTAAATGTGAATATTGCGCCTCAACATTCATTAGTAATAATAATCTGCGTCGTCATATGTATGAGCTCCATAAGCATGAGGTAAGCAATCTGCCAGAGCCACCAGTGATAATAGTTGATGATCCTTTGACATGTCGTCGGTGTGGTAATCTAACATTTGATACAAAGGAGCTATGGATTGCGCATAAATTGGCTGATGCCAAGGTTGTTCGTCCATTTTGTCCATTCCAATGGGGCTGTGATCTTTGTGGTGAATATTTATCACGCAAAGAGAAGTTAATCCATCATATTAATAATCATCTAAAGGAGGATGTTATTGTCCCAGTTACTGTGGCAACAGCGAAACGTATAGCaacatcttcatcatcatcaacaacaacaacagcaacaacgaaatcatcaccaacaacaacatcatcaataGCTGTTAATAAGagttcaaaaataataaccacaacaacaggaaaagcaacagcaacgaaatcatcaacaacgacaacaaaagaaacaacaccgacaacaacaacaacaacagctgctgctggaacaacaacagcaacagctaaaaaTGTTAAGAGTGGTAAACCTCGTATTGAACTTGTTCCGCAGGAGAAATTAATGAAAAGACCACCACAAATTGCTAATAATAATgaagatgataatgataatgataataataataataatgataacgacaatgacaatgatgatgatgatgaagttgatgatgatgaaggtGGTGGTTGTAGTAGTGAAATGGATGATGAAGAGAGTGTTagtgatgataatgataatgaaaatgataatgctaatgataataataatgcgaATAGTACAAGtgctgatgacgatgatgatgaggaggaggatgaggatgacgaTGAAGATGGTGtcgatgaggatgatgatgatgatgatgatgaagatgaagatgtgGCTGATGttgcacaacagcagcagcagcagcagcagcatcgaaaacaaacacaacacaacaacaataatgatgatgatgatgatgatctcATTGAAGAAGTAATTGAAGAGAtagacgatgatgatgatgatgatgatgttgtggAACACATGACcaatgctaataataataaaaagcaacaaaaatcaagaacagcaacaacagcagcaacagcaaacagtaaacagttaacacgccataactttaattatacaCCCACTGGCAGTGCCAAGCTCAATGGAACTGGTGGTAAACAGACGCCACAACATCAGCAGACCAAGTCACAATCTCAAGCTCAAGCTCAAGCTCAATCTCGAAGTCaaagtcaacgtcaacgtcaaacAAAATCACAAGGTAAAGTGATGGTTATGAATAGCTCTGAAGATGatgaggaagaagaagaagaggatgataatgataatgataatgataatgaaaacaatgatgatgatgatgatgatgatgatgttgttgtagaaGAGAATGTAGTTGGTGTTGATGACGAAGATGAGGAGGAGGATGAAGAGGAAGAAGTTGAGAATATGGACGTTGTGGAAACAATGAATATCGATGATATTATCGAAGAAGATGATGGTGAGGAtgttgacgatgatgatgatgatgatgatgacgacgaaaTGGTTGGTGTTGGTGATGTTATTGAGGAGGATGACATGGATGACGACGATGGTGATGCTGCCGATGCAGACGATGAAGCCAATGTtgttgatgacgatgacgatgacgatgatgatgatgatgatgatattgatGATGGTGTTGATGacgatgttgatgatgatgataacgacgatgatgatgatgatgatgaagatgaagacgaCGATATTGAACATATTGCTAGCAGCGATCATGGCGATGGTGATAACAATGGAAATGCTGCTGATGGCATTGATACATCATCATCTGAGAGcgaatcaacaacaacaacatcgcaTTCAACTGGTGAGAGGAGAAAAAAATCAGTTATTGCATCAGCAGCACATGGTGCATCTGCTGCTGATCCATCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTTGATTCTCAGGAGCTACTTCAGACACATATTAAAAGTCATTTTCTGAATGGGCCATCGATGGGTAATAatggtagcagcaacaataccagcaacagcagtagtcGTAGCAACAGTCatgctaacagcaacagcagtaggaGCAGTACAACAAGAAGCAATAgaaatagtagcagcagcagcagcaacaacaacagcaacaacaacaacaacagtagcaacaaatcaaatagCAAAAAGCCTGGCTCTATGGACACAACTAAAAGTGGTGGCAACATTAAATTAGGAAAATCAACAccaactgttgctgcaacatcaGCCGTTGCTAATGCTTCTAAAGGCTTGAACtga
Protein Sequence
MNPKLVQVQDHAALLDMLYGLRVFNSGQHHSLCAFMATLLITPLDRLSLHICHACISYLNSWQSFKNRCLSSQAKQRQWLDTDKAKQQTLLGYLDLNRAENGGGSNDHQQQQSELKTDSSLTAAEKATAANILDGIPALKKRKSLTVYVSPKQQPQQLLQQQQLQQQKHQQQQQQSATRMISAAADPQQKLHTLLLQVPPKAMATTSSQQHQRKFQQQQQQQQQQQQQQQQYQQRGKQQHHYHHHHHHQQQNKPQQYQHQRQKRFRQERRQQHTMNVQRLSKFKSKFYMPLDITVPAFPTLLPPMLPHGLSTVSSTSTTTATTSALTNLTGVAETATLPLTLSLPFDKSHNQNHNQSLCHKHSSVLPPPPTTYPVATVTSNAAATATGAAAATAFKTSNASSTIAVAQTPLLMPPLPAVPIKDEPMDDTDDDYQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVAAAATLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDQPEQYQQLLTRDKVEFLQQNSEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLCRVLNAIRVKQPNFLYATGNGTISTTEDQLLLSSAATTPHENTSSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDHANVNSSMDHSPGKRSLLGALGIGVEQSSNDESRSSSNNKNNSNAAATGGTPLTSTPKVTGGAAAAAAAAGGTNNTNRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSIPNVYTGRYDYVMKDLMSITNGGTIDDDDEEVSGSIAKKMRLDDSSNNSSVNLSIANQQKECPICNSVFSNNIGLSNHMRSHYTAALAAANRMTPKSLTITATPPLDATAATTSNNALAASAAAATTATTTTAATTNTTTVATAAVAGGGVTTITVGKSSGSLPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDICSIVYSSEMELQQHKRSVHKSQIGNTTHNNKSTSKNATATSDGLNASDTTGMGGAAAGSSLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDHQQQLQMQQHRGIFKHKTGDDDDDDEDDDQLLLLDDGGGGGGGGGGSSGSVAGIGNDSNGTINTIPVTSNIKTNTINTSTLKIRIPEVACTICGARFTDQEMFSKHIQKHEQDLYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQNPIIDGEATSLNNSNNNNNNNNSLSSSSMLHLRELHAVGLMPNQQHQKQQQQQQQQQQNSSSSANKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIIVDDPLTCRRCGNLTFDTKELWIAHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLIHHINNHLKEDVIVPVTVATAKRIATSSSSSTTTTATTKSSPTTTSSIAVNKSSKIITTTTGKATATKSSTTTTKETTPTTTTTTAAAGTTTATAKNVKSGKPRIELVPQEKLMKRPPQIANNNEDDNDNDNNNNNDNDNDNDDDDEVDDDEGGGCSSEMDDEESVSDDNDNENDNANDNNNANSTSADDDDDEEEDEDDDEDGVDEDDDDDDDEDEDVADVAQQQQQQQQHRKQTQHNNNNDDDDDDLIEEVIEEIDDDDDDDDVVEHMTNANNNKKQQKSRTATTAATANSKQLTRHNFNYTPTGSAKLNGTGGKQTPQHQQTKSQSQAQAQAQSRSQSQRQRQTKSQGKVMVMNSSEDDEEEEEEDDNDNDNDNENNDDDDDDDDVVVEENVVGVDDEDEEEDEEEEVENMDVVETMNIDDIIEEDDGEDVDDDDDDDDDDEMVGVGDVIEEDDMDDDDGDAADADDEANVVDDDDDDDDDDDDDIDDGVDDDVDDDDNDDDDDDDEDEDDDIEHIASSDHGDGDNNGNAADGIDTSSSESESTTTTSHSTGERRKKSVIASAAHGASAADPSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPSMGNNGSSNNTSNSSSRSNSHANSNSSRSSTTRSNRNSSSSSSNNNSNNNNNSSNKSNSKKPGSMDTTKSGGNIKLGKSTPTVAATSAVANASKGLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-