Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_037044455.1
Location
JBAMBS010000801.1:75373-77224[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.1 7.1e+03 -2.5 0.1 4 17 27 39 25 45 0.55
2 3 1.1e-07 0.00019 21.8 0.0 4 38 308 345 305 346 0.86
3 3 1.1e-08 1.9e-05 25.0 0.2 3 43 401 447 399 449 0.82

Sequence Information

Coding Sequence
ATGGAGTTGTTCGCTAGGACAACTCAACTGCCAGCAATTTTGCTTGGgctcctgctgctgtgtgGCTCATGCAGTGCTTGGCACTCTGAAGAATTGGAAATTTTCGACTTGGTCGAAGAggtcaacaaaaatttttatgaatttatggGCATAAATCAGAACGCTACAAATACTGAAATCAAGCGAGCTTTTCGTACCCTTTCCATTGTCCTTCATCCGGATAAAAACTCTGCTGAGGATGCCAATATTCAATTTCGAAATCTTGTTTCAATATACGAGGTCCTTAGGGATGGATCAAAACGCGAAAAATATGACAAAGTATTAAAGGAAGGCATGCCAAATTGGAAGTCCGCGCTCTACTATTATCGTCGTATGCGCAAGATTGGACTTTACGAGGGTGCCTTTATATTGTTTCTTATTATCACCGTTGGCCAGTATTTATTTGCTTGGGCCGCATACTTAGAGAAGAAGTACACGGCTGAACAGGTATTTggaacaaaacttaaaaagcTACAAAAGCGCAATAAGAATATCGACATGGACGTCATACTCAGCGAGATACCTACGCCATCTGTACTCAATACTTTGCCAATACAAATACCACTTGCCATCTGGAATCTTCCCAAGGCAATCAAAAATGGCTTCACCAAGGCCAACGAACTAAAGGAGCTGGCTCTCGAAAAGCGGAGACAAGAGTTGGAGGCGGCTCGTCGTCAGGAAGAATTAGAGCGTCAAGCTGAAGAGCAAGTTCGTCTGCGAAAAGAGCACAAAGAAAATCTACGTAAGCGGAAGCAGAATAGCAAAGCTCCAGAGAAAACTGCCGAAGAGTTACGTGGCTACTCACAAATTCAGACGCGCGAGTCAAACGAAGAGGATGCAATTCGTCCAGCAGCACAAAAGagTAATGTTAGCGGAGGATTTTGGACAGATGAAGATCTCGTAGAACTTATACGTCTAGTTAAAAAATATCCTGGTGGCGCAGGCAGTCGCTGGAATACTATAGCTGAATCAATGAATCGTAGCGTACATGAGGTTACATTTATGGCGGCTAAAATGAAGGAGAATGGCTATCGGCTACCAGGACAATCAGAGAGTGTTGCCGAAAACATTGTTCAGGAATCACAACAGGCAGTACGcaaagaaaaagtgaaaaaggGGGGTACAGCAGTAAATGAGAAGAGCATGTTAATACCAGAGACAAACTGGACTCAAGAGCAACAGCGTGCTCTTGAAGCAGCTATTGTTAAGTATCGCAAAACCGCCGGTGGCGGCGATCGTTGGCAAAAAATTGCCAACAGTGTACCAGAGAAGACCAAGGAGGAATGTTTGGTGCGCTATAAATACTTGTGTGAGCTTGTCAAGACACAGAAAAAAGCAGAGGAAGACGAAACAGAAACACCGGGCGAGTCAGCATCTATAAttaatgctgatgctgttgtgcCAAATGCAGCAGAGCCAGAAGAAGAGGCAACATCAACTGCTCAAGAATTGCCCACCAAGAAGTTAAGCAAACGCGACCAACGTCGTCGTAAACGCGATATTTCTAGCGATGAAGAAACTGATGATGCATATCAATATGAAATCAGTTAG
Protein Sequence
MELFARTTQLPAILLGLLLLCGSCSAWHSEELEIFDLVEEVNKNFYEFMGINQNATNTEIKRAFRTLSIVLHPDKNSAEDANIQFRNLVSIYEVLRDGSKREKYDKVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPTPSVLNTLPIQIPLAIWNLPKAIKNGFTKANELKELALEKRRQELEAARRQEELERQAEEQVRLRKEHKENLRKRKQNSKAPEKTAEELRGYSQIQTRESNEEDAIRPAAQKSNVSGGFWTDEDLVELIRLVKKYPGGAGSRWNTIAESMNRSVHEVTFMAAKMKENGYRLPGQSESVAENIVQESQQAVRKEKVKKGGTAVNEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEDETETPGESASIINADAVVPNAAEPEEEATSTAQELPTKKLSKRDQRRRKRDISSDEETDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00805897; iTF_00359391;
80% Identity
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