Zfil011779.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015673.1:4208610-4218193[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.3e-05 0.0032 18.4 1.0 1 23 252 274 252 274 0.99 2 11 0.085 6.3 8.0 4.9 1 23 282 305 282 305 0.92 3 11 0.0014 0.11 13.6 2.2 1 23 407 429 407 429 0.99 4 11 0.0018 0.14 13.3 0.7 2 23 438 460 437 460 0.95 5 11 0.00055 0.041 14.9 2.3 1 23 491 514 491 514 0.98 6 11 0.027 2 9.6 1.6 3 23 520 541 519 541 0.90 7 11 1.4 1e+02 4.2 0.1 2 20 560 578 559 580 0.93 8 11 2.6 1.9e+02 3.3 0.1 3 23 693 714 692 714 0.88 9 11 8.5e-06 0.00063 20.6 0.6 1 23 723 745 723 745 0.98 10 11 0.0047 0.35 12.0 1.3 3 23 753 773 751 773 0.96 11 11 5.8e-06 0.00043 21.1 2.6 1 23 779 802 779 802 0.98
Sequence Information
- Coding Sequence
- ATGTGGGATTTAAAAGCGTGTACAGTTTGTCTAAGCACTGATGTTAAGCTATATAACATTAATGATCAATTGAGACAGGACTTTAACTTGGTGGCTGGTTTGAAGAGACGTCAGGGCGATGGCTTGCCAAACTACTTGTGTGTGGAATGTGTAGCTTACGTTAAAAAATTTATACTATTCAGAGGGAAATGTCGGCGAGCAGACTTCACATTACATGAACTACGAAACAGGAATAAAGAGATAACCAAATCTTCCTTGAAATCATTGGATCGAGAAGTAATTGGTATCATGCCGTATCTATCATTTCTAGATGACAATAGAGTATGCTATCAAGAAAGCAAGTTCCAGTGGTTGAATTATAACCGACCTGGCCTGAAGCACACAGAAGTACCCATATTACAGTATGCTACAGTAAAATGTGATGCTGTAAACAACAGTGACGCAGTTGTTAAAAAGGAATCTTTTGTATCTGAACATGAAGCAAAAGATATTAATTTAAATGTTGACAATTTATTAGATCAATCAACTAGTGTTAATATTGATGCTAGCAACATTGATTCATTATTTGATAGTTATAACTTTGATGGTGATGATGATGATAGAGATGAAAAAACTTATAAAGTTGAGTCCAACTCTGAGACATCAGAAGCAGATGGATCTAAGTTGGATCAAGAGTATGCTTCCATGGTACCAATATCAGAGAATGAGGCAAAAGCTGCTAAAGAGATTTGCTCAATGCACAGCAGTGGGAAGTATAGATGTGGCTTTTGTAACAGAGGTTACAATAATGAGAGCCGTTTAACTGTACATATGCGCATGCATGATAAGTATGTAAGTGGCACCTATCATTGTGAGTTCTGTGACTATTACTACAAAACTGAGCACCTGTTGAAGGTACACCTTACTGATAAACACATGTACAAGTATTTGTGTAAAAAATGCCCCGAAGTGAGCTTTGACAGACTGTCAGCAAAACAGCACTATATTTGTATGCATATGAAAAAGTTTGGCAAAAGAGAAGCTGATTGGTGCAAAAACCGACCGAAATGGCTAAGCGCGAAGGGAGGCAAGCGTGTCAAAGGGGTTGTGTCCATAAAACCAACTCGCAAGTTGAAGAAACTGCCCGCAGACTTTCTGGTCTACTCTCCAGTGGGACACACGGAGCAGTACACAATTATACAGGATAGACAAAAGTCCAGGAATTATATTGAGGCTAAGTTCAAGTGTGAACTTTGCTTCAGGGGTTTCAGAGAAGTTGGCACTTACAAAAAACATATGCAAAAACATGATCCAGCGGTGTCTGGTCCGCTGCAGTGCGACATGTGCAAGGTTTTCTTCCGCAACGCGCGCAGCATGTACAAGCACATGATCATCACGCATCTCTTCAAGTACTCGTGTCGGGATTGCGCCTTCGTCTGCTACAACAGGGGGCAAGCACATATGCACTACAAATTTCATAAGAACGTTACATATAGCTGTCCGCACTGTGATATGGAGTTCAAGAAGCTGTCGACGCGGCTGACGCACATAAGGATCAAACACCCGTCCACGAACATCTGCAACATCTGCGGGCGCAGCTTCGTCAGCGAGGCGGGCCTGTGCTGCCACAGGAACCTCGCGCACAAGGAAGAGGAGGGCGGCGGCTCCCCCGGGGCGCCGGACCCCGAGGACCCGCTGTACTGCGCCGACTGCAACGTGCAGTTCCTGAACCAGGACGCCTTCCAGACGCACCTGGGCAGCTCCAATAAGCACGCCGACATCAATTTTGCGTCGAAGCCTGCGCGGGCGCCGGGCAGGAGTGCGCGGGGCAAGGAGGGCGCGGGCGGCGCGCGCAAGCGGGGCCGGCCGGCGCGCGGCGTGCAGCCCTCCGAGGTGCTCAACAACGGCGCCATCACCGCCAGCGACTGCGAACTGGTCAGTAAGTGTGTCGCCGTCAGGGCGGCGAAGCCTGCGCGGGCGCCGGGCAGGAGTGCGCGGGGCAAGGAGGGCGCGGGCGGCGCGCGCAAGCGGGGCCGGCCGGCGCGCGGCGTGCAGCCCTCCGAGGTGCTCAACAACGGCGCCATCACCGCCAGCGACTGCGAACTGTGCGGCAAGTACCTGGCGAATGACGTGCAGGCGCGCAAGCACTACGAGGCGGAGCACCCGGGGCACGACTTCCTCAAGCGGTACATGTGCGACGTGTGCGGACACGCCACCAAGCAATACGCGAACCTGCTGGTGCACATGCGCACGCACACGCGCGAGAAGCCGTACGGCTGCCCGCACTGCGACCGCCGCTTCAGCATGACCAGCAACCGGGACCGCCACCTCGTCGTGCACACGGGCGAGAAGCGCTACCAGTGCCAGCACTGCAACCGCCGCTTCACGCAGAGCAGCGCGGTGAAGCTGCACATCCAGACGGTGCACCTCAAGATACCGTACGCGCCCTGGGACAAGAAGAACCGCAAGCGGCGCAAGCTGACCGACGCGCCGCCCCCCGCGCCCGCGCCGCCCGCGCCGCCCGCGCCCGCGCCGCCGGAGCTGGCGTACAGCCAGCCCAAGCTGATGCTGGACTCGCAGGGGGACTACCTGAACGCGTACATCACCTACAGCGACGAGTGA
- Protein Sequence
- MWDLKACTVCLSTDVKLYNINDQLRQDFNLVAGLKRRQGDGLPNYLCVECVAYVKKFILFRGKCRRADFTLHELRNRNKEITKSSLKSLDREVIGIMPYLSFLDDNRVCYQESKFQWLNYNRPGLKHTEVPILQYATVKCDAVNNSDAVVKKESFVSEHEAKDINLNVDNLLDQSTSVNIDASNIDSLFDSYNFDGDDDDRDEKTYKVESNSETSEADGSKLDQEYASMVPISENEAKAAKEICSMHSSGKYRCGFCNRGYNNESRLTVHMRMHDKYVSGTYHCEFCDYYYKTEHLLKVHLTDKHMYKYLCKKCPEVSFDRLSAKQHYICMHMKKFGKREADWCKNRPKWLSAKGGKRVKGVVSIKPTRKLKKLPADFLVYSPVGHTEQYTIIQDRQKSRNYIEAKFKCELCFRGFREVGTYKKHMQKHDPAVSGPLQCDMCKVFFRNARSMYKHMIITHLFKYSCRDCAFVCYNRGQAHMHYKFHKNVTYSCPHCDMEFKKLSTRLTHIRIKHPSTNICNICGRSFVSEAGLCCHRNLAHKEEEGGGSPGAPDPEDPLYCADCNVQFLNQDAFQTHLGSSNKHADINFASKPARAPGRSARGKEGAGGARKRGRPARGVQPSEVLNNGAITASDCELVSKCVAVRAAKPARAPGRSARGKEGAGGARKRGRPARGVQPSEVLNNGAITASDCELCGKYLANDVQARKHYEAEHPGHDFLKRYMCDVCGHATKQYANLLVHMRTHTREKPYGCPHCDRRFSMTSNRDRHLVVHTGEKRYQCQHCNRRFTQSSAVKLHIQTVHLKIPYAPWDKKNRKRRKLTDAPPPAPAPPAPPAPAPPELAYSQPKLMLDSQGDYLNAYITYSDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -