Zfil021647.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015670.1:6068420-6080687[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00079 0.059 14.4 1.3 1 23 454 476 454 476 0.98 2 11 0.021 1.5 10.0 1.7 1 23 483 506 483 506 0.96 3 11 0.018 1.3 10.1 0.7 1 23 510 532 510 532 0.98 4 11 3.6e-06 0.00027 21.8 0.2 1 23 537 560 537 560 0.98 5 11 0.00042 0.031 15.3 1.0 3 23 566 587 564 587 0.95 6 11 0.095 7 7.9 0.0 3 20 601 618 600 620 0.93 7 11 4.2 3.1e+02 2.7 0.0 3 23 693 714 691 714 0.93 8 11 2 1.5e+02 3.7 0.1 3 23 731 750 730 750 0.89 9 11 5.2e-06 0.00038 21.3 0.1 1 23 761 783 761 783 0.98 10 11 9.5e-07 7e-05 23.6 2.4 1 23 790 812 790 812 0.98 11 11 0.00035 0.026 15.5 1.2 1 23 818 841 818 841 0.93
Sequence Information
- Coding Sequence
- ATGAAATGTACAGTACCTGGTTGTAATAATGATTCTGCAACAGTTTCGAAATCGGCAGGCATTTCTTTCCACACTATCCCAACGCAGCTGTCACTCCGTAACGCATGGTTGAATGCAATTGGTGTCAACCCTTGCATATTTGAAAAAAAAGGTGGAGTGGTGTGTTCCAATCACTTTCTGAATAATGACCTAGCCAGATTTAAGCAGAGCGCCTTGCACACGGGAGACATACCAACACCGTCTTGTCAAGATTCAACTTCCTGTGACAATGTGAAACCGGCAATTTTGAAGATATGCAGGATATGTCTGCTGATGGATACCAAACTTCTCTCCATGAAGAGTTGCAATTTGGCGACGGCGTACTCGCAACTCACTGGACTACCGCTGGAGGACGGCTTGCCGCAGGAGGTGTGCTGGGAGTGCGCCCAGCGCGTGCGCAACTGCGCCAGGCTGCGCGCGAGGGCGGTGAAGGCGCACGCGCTCATGAGCAGCCTGCTCGAGCGGGAGGGGCGCCTTTCTATCGACTCACTAAGAGCAATAAACAGAGAGAGTAACCATTTAACAAGTAATCTGAACGTGAATTACCACGGCAATAATCACGTGAACTTTATTTATATCTTCAAGAACGATGATCCACAAACAAACACGACTGGTGAAATGTCGCACCCGCACCATATACCAAAAACTAAAGTTGAAGTGAACAATGAAATATATTTACTGGAAAATAATGACAATTTTTATCAGGAGGATGTTAAACTAGACGTTGAATACGCAGGGGTAGCAAGAGACGTTAATAACAGTGAACTGTGCAGTGCACAGAAAATGGTCTTAGATTGCGAAATCGATCGATCGCTTTTATCTGCATCGGCCAACAATTACGATGATGATGAAAGAAACGCTGAACACACATATAGCGTTGACAACAGTAAACTCTGTAATGTACAAAACATAAACATCGATAGCAAAATCAACTCGCAATATACATACGTAGTTACAATCACCGATGACAGTAAACTTGGCAACGCACAAACAATTGACTCTGATGACGAATTTGAAAAACAAATAGACGCCTTCCTAGCTGCGTCAGACAACGAGTTTTTGCTAGACGACATCTCATTGCCAAAAATAACAAAAAGCAAAAAGAAAGTGTTAAAGAAACCGAAACAAAAAGTAAAAAACGAAAGAAAGGTTATAAAGACGATTGTAAAGAAACCTAAAAAACCAAAGAAACTTAAACAACGGAAAGTCATCGAGAGCGTGGAACCGCTAACGTTATTCACAATAAAATTTTTGACCAAAGAGGAGCATCTGGAAGAGCTGGAGAAACGAAAGGAGTCTGATAATTACAAGAAGTCTTTGTATAAATGTACAGAGTGCTTCCGTGGATTCATCGAGGAATACTCTTACAGAAGCCACATGATGCTACACACTGATAAATGCGGTGAATATGTGTGTGAAATATGCAAATCGCACTACGAGAATCGGAACCGGTTAATGAAGCATATAAAAGCGAACCACTCGCTGAAGTATACATGCAATGAGTGTCCGTTTGTCACCTTCCAAAAGCAATCAGCGCTAAACCACCAGCGCTGGCACAAGGGCACGCAGTACACGTGCGAGATTTGTGGGGAAGTTTTCGCCAAAATAACGACGTTAAAGAGCCACATGCGCATAAAGCACCCGTCGGACATCGCGTGCGAGTACTGCGGCTACTCGTTCGTCAGCGTTAAGGGGCTCCATCGGCATCGGAAGCTGAAGCACCAGCTTCTTGATCAACAGATTCCAGCGGACGGGCCGTACTGTGCCGACTGCGACGTGCGCTTCGCGTCGGAGCAGGCGCTGAGCAATCACCTCGGCGTTTCCGCGCGGCACGCCACCGCCAAGGATGCGGTTCAGATGAATGTGATGAAGCCGATAATGTTGCGCCAGCTGATGGCGGCCAGCGGCGACGGCTCGTGGAGCGAGGGCCCTCCCCCAAAGCGCCCCTACTCGGAGGGCAAGATCCGCCGACCGCGCCGCCGCGGGCCCGCAGCCATGCAGCCGATGGCGATTCAGCCGAAGAAAGAGCCTATAGATTGCGAACAGTGCGGGCTCCAGTTGGAGGACTTCGCCGCGTACAACGGCCACTTCCGGCGCGCGCACCCCGACAAGAACCGCACCAACTACGCCTCCATGAAGTACCCGGCCATGTGCGAGCTCTGCGGCAAGATACTGCCGAGGGTGTACCTCGCCGACCACATGTACCAGCACGGCAGCGCCGACGCCGGCGCCGGCAAGCGGTACGAGTGCGACGTGTGCGGCAAGGGGTTCGCCACCAAGAGCCCGCTCGCGACGCACCTCAAGCTGCACTCGGCGTCGCGGCCCGCGTTCGAGTGCGACCAGTGCGGCACGCGGTGCAGCACGCGCGGCAACCTGCAGCGGCACATGAAGATTCACATTGGCTTGAAACCGTTTAAATGCGAGATCTGCGGCAAAGCCTTCAACCAAGAAGACACGAAGCGAACTCACAAAAACTTCGTGCATTTCAAGAAGCCTTGGCCGAAGCGCGATCGAAGTAAAAGACGGCAGTTGGCGCGAGCAGCGAGTGCGAGCGAGACGGACATAGGTCACAAGGCGAGCAGCGCGAATTTGTCGGACAATAAGTCATTAGGCTACTACGCTATTAAGGACTCGGTGTGA
- Protein Sequence
- MKCTVPGCNNDSATVSKSAGISFHTIPTQLSLRNAWLNAIGVNPCIFEKKGGVVCSNHFLNNDLARFKQSALHTGDIPTPSCQDSTSCDNVKPAILKICRICLLMDTKLLSMKSCNLATAYSQLTGLPLEDGLPQEVCWECAQRVRNCARLRARAVKAHALMSSLLEREGRLSIDSLRAINRESNHLTSNLNVNYHGNNHVNFIYIFKNDDPQTNTTGEMSHPHHIPKTKVEVNNEIYLLENNDNFYQEDVKLDVEYAGVARDVNNSELCSAQKMVLDCEIDRSLLSASANNYDDDERNAEHTYSVDNSKLCNVQNINIDSKINSQYTYVVTITDDSKLGNAQTIDSDDEFEKQIDAFLAASDNEFLLDDISLPKITKSKKKVLKKPKQKVKNERKVIKTIVKKPKKPKKLKQRKVIESVEPLTLFTIKFLTKEEHLEELEKRKESDNYKKSLYKCTECFRGFIEEYSYRSHMMLHTDKCGEYVCEICKSHYENRNRLMKHIKANHSLKYTCNECPFVTFQKQSALNHQRWHKGTQYTCEICGEVFAKITTLKSHMRIKHPSDIACEYCGYSFVSVKGLHRHRKLKHQLLDQQIPADGPYCADCDVRFASEQALSNHLGVSARHATAKDAVQMNVMKPIMLRQLMAASGDGSWSEGPPPKRPYSEGKIRRPRRRGPAAMQPMAIQPKKEPIDCEQCGLQLEDFAAYNGHFRRAHPDKNRTNYASMKYPAMCELCGKILPRVYLADHMYQHGSADAGAGKRYECDVCGKGFATKSPLATHLKLHSASRPAFECDQCGTRCSTRGNLQRHMKIHIGLKPFKCEICGKAFNQEDTKRTHKNFVHFKKPWPKRDRSKRRQLARAASASETDIGHKASSANLSDNKSLGYYAIKDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01569426;
- 90% Identity
- iTF_01569426;
- 80% Identity
- iTF_01569426;