Zfil001643.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- ZNF212
- Assembly
- GCA_907165275.1
- Location
- OU015665.1:7013304-7025954[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.057 4.2 8.6 0.4 6 20 10 24 5 26 0.91 2 12 0.045 3.4 8.9 0.3 2 20 32 50 31 52 0.93 3 12 0.22 16 6.7 0.2 1 12 201 212 201 215 0.93 4 12 9.3e-05 0.0069 17.3 0.1 1 23 390 412 390 412 0.98 5 12 1e-05 0.00075 20.4 1.1 1 23 429 451 429 451 0.99 6 12 2.1e-05 0.0016 19.4 0.5 2 23 504 525 503 525 0.96 7 12 0.0026 0.19 12.8 2.1 1 23 541 563 541 563 0.98 8 12 1.5e-06 0.00011 23.0 4.5 1 23 569 591 569 591 0.98 9 12 0.00045 0.034 15.2 5.7 1 23 597 619 597 619 0.98 10 12 2e-06 0.00015 22.6 0.4 1 23 625 647 625 647 0.98 11 12 0.00045 0.033 15.2 1.1 1 23 651 673 651 673 0.98 12 12 0.00067 0.049 14.6 0.1 1 23 681 704 681 704 0.96
Sequence Information
- Coding Sequence
- ATGGAAGAATTGAATTGCTCTCTGTGTTGTGATAAAACATTTCCATCAAAACAGTCTCTTATTGAGCACCTGATAAATGTTTTATATAATTTATCTTGCCCGATATGCAACTGCAAACTGTCCTCGCTCTCAACACTAGTGGAACACTTGACCCTTAATAACTGTGAAGCGCGAAATATAGACCAAACTGTTGTTTATCTCGAAAATAATTCATTACCAGAAAACGATGTCACAGAAAATTCAAATTCGGACCAGTTTTCATTAATTGATGCTGAAAATCATAACATTACCCCTGATCCGTTTTCATCTGAGCATAGTCCTGATCACAGCGCAGATGTCGGTGAAATGTATGTTGAGTTGTTGAGCAAGCAAATGACGAAGCCCTGCCTTCAAACTCAGGGGGTGAAACTAATCATGGAGGAGGGAGATAATCGCTACACACTTATAACTAACGAGGATCCCTCTTATTCCCCACAAACAGTTGTTACTAAACAAAACAGCGATGGAACTATATCATTGATAGATGAAAAAGATATAAAATCTGAAAGTTTACTGCCTAATTCTGTGAGAAATGTCAAGCAGCATAAAGAGGCAACATCATACAGTTGCAATACTTGTGGTGTAACATTCACATCAGTGCTGGACCATATACAGAACTACCACAATGATCAAGATGTTGTGGTTGAGGAACCTGCAGATGATAATAGCAGTGTGCTGCCGATAGAATATGAATCCCTTGTGTTGTACAACAATATGTCTGACAAACGTATGTCACAGAGGGTGATCACTGAATCTGGAAACATTGTGGAAGCCCCCCTAGACTCTAAAGATGATGCTGGAACACATCAGGAGCCTACAGTGGAACAAACCACAAGCAATGAAATACAGGAGATAAGAACAGAATCACCAATAAAGATAGAAGAAGCAGAAAATGTTGAAAACAGCGAAAAGGAAAAAAAACGATATATAAAAGTAGACGAACTTGGTTATAGTTTTGTGAAGGACATAAAAAAAGGTAAAAAAGAGCCATATCACAAGGTGTTGGTGAAAGAAATGCAGATGATGGATGGTGACAATAAGACGAAGGTGAAAGTGTACAACTGCGTGACTTGCCACATTTACGTCACCAATGTCGAGGAGTTCAGGCAACATCCGTGCAAACTGCATTATCCTTGCCCACAATGTCCTGTCGCGTACGACAATTCGAAAGCTTTATGTGCTCACATGAAAGCACACAAAAATAACGACGCCGGCACAGTCATCGAGACCGAAGATAACGGCATATACAAGTGTGGCATATGTTCGACGGTGTTTCCGACAAACAAATCGTTAAAACTGCACAAAAGAATGCACGATCCTGTTAAATCCCGGCCGATAGAGCCGCCGGTGACGCTGGCGTCGGGCGCGGCGGTGAGCGCGGACAAGTACCTGTGCGCCGTGTGCGACAAGCTCATACCGAAGGACTACAAGGCGATCCACCAGAGCTTCCACAAGAACGACAACGCGCTCAACTGCGACATATGCAACAGGAAGTTCCAGTCCGCCGACTATCTGCAAATGCACATGAAAGTGCACAACGTCGACAAGGCACCCGTGAACAATCAAGACAAATCGTTGCCGTACAACTGTTTGTATTGTAACAGACAATTTGCGAGGCCCCACGAGAAAGTTAAACACGAGCGAATACATACAGGCGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGAGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGTGCGCGCCCTTACGCCTGCCCCCACTGCGGCAAGAGGTTCAAAGCGCACAGCGTGTACAACCACCACTTGCAGACGCACTCGGAGGTGCGTGCGTACAAGTGCCCGTACTGCCCGAAGGCGTTCAAGACGAGCGTGCAGCTCGCCGGCCACAAGAACTCGCACACCAAGCCGTTCTCGTGCCAACACTGCAACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACACGGAGACGCACCTGCGGCAGAACAACCTCAAGTTCTCGTGCGCGCTGTGCGGCGCCAGCTACGCGCGCACCTTCGCGCTCAAGGACCACATGAAGCAGGCGCACGACAAGGAGATGGACGCCGCCGGCGCCGACCCAGTGACAAACAGCAAGGACAACGACTGGGCAATGGCAGATATTATCAAGAAAGACAGCGATGACGCACAAAGTCAAAAAGACGTTGGTCAGGTTTGA
- Protein Sequence
- MEELNCSLCCDKTFPSKQSLIEHLINVLYNLSCPICNCKLSSLSTLVEHLTLNNCEARNIDQTVVYLENNSLPENDVTENSNSDQFSLIDAENHNITPDPFSSEHSPDHSADVGEMYVELLSKQMTKPCLQTQGVKLIMEEGDNRYTLITNEDPSYSPQTVVTKQNSDGTISLIDEKDIKSESLLPNSVRNVKQHKEATSYSCNTCGVTFTSVLDHIQNYHNDQDVVVEEPADDNSSVLPIEYESLVLYNNMSDKRMSQRVITESGNIVEAPLDSKDDAGTHQEPTVEQTTSNEIQEIRTESPIKIEEAENVENSEKEKKRYIKVDELGYSFVKDIKKGKKEPYHKVLVKEMQMMDGDNKTKVKVYNCVTCHIYVTNVEEFRQHPCKLHYPCPQCPVAYDNSKALCAHMKAHKNNDAGTVIETEDNGIYKCGICSTVFPTNKSLKLHKRMHDPVKSRPIEPPVTLASGAAVSADKYLCAVCDKLIPKDYKAIHQSFHKNDNALNCDICNRKFQSADYLQMHMKVHNVDKAPVNNQDKSLPYNCLYCNRQFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLQTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHLRQNNLKFSCALCGASYARTFALKDHMKQAHDKEMDAAGADPVTNSKDNDWAMADIIKKDSDDAQSQKDVGQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -