Basic Information

Insect: Zygaena filipendulae
Gene Symbol: -
Assembly: GCA_907165275.1
Location: OU015658.1:2162012-2164241[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7e-06 0.0002 22.2 1.7 1 23 149 171 149 171 0.98

2 9 2.6e-08 1.9e-06 28.5 1.6 3 23 179 199 177 199 0.98

3 9 8.8e-05 0.0065 17.4 0.3 1 23 205 227 205 227 0.98

4 9 9.5e-06 0.0007 20.5 1.7 1 23 233 255 233 255 0.99

5 9 2e-05 0.0015 19.5 1.7 2 23 358 379 357 379 0.96

6 9 2.5e-09 1.9e-07 31.7 1.6 1 23 385 407 385 407 0.98

7 9 0.0021 0.16 13.0 0.6 3 23 415 435 413 435 0.97

8 9 5.5e-05 0.0041 18.1 1.5 1 23 441 463 441 463 0.99

9 9 0.017 1.3 10.2 0.8 1 23 469 493 469 493 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7e-06	0.0002	22.2	1.7	1	23	149	171	149	171	0.98
2	9	2.6e-08	1.9e-06	28.5	1.6	3	23	179	199	177	199	0.98
3	9	8.8e-05	0.0065	17.4	0.3	1	23	205	227	205	227	0.98
4	9	9.5e-06	0.0007	20.5	1.7	1	23	233	255	233	255	0.99
5	9	2e-05	0.0015	19.5	1.7	2	23	358	379	357	379	0.96
6	9	2.5e-09	1.9e-07	31.7	1.6	1	23	385	407	385	407	0.98
7	9	0.0021	0.16	13.0	0.6	3	23	415	435	413	435	0.97
8	9	5.5e-05	0.0041	18.1	1.5	1	23	441	463	441	463	0.99
9	9	0.017	1.3	10.2	0.8	1	23	469	493	469	493	0.95

Sequence Information

Coding Sequence: ATGCTGATATCTAAATACGACAGCGCCGTACGTGCTATACAAAGATGGCGTGGAGCGCGCGCCTCCGGGCACGCAGTGGGGCGGCGGCATGCTGGACAGCGGCTACCAGCCCATGCAGCACCAGAGCCCCGGCGGGCCCTCGCCGCAGCCCGAGCCGCAGCTCACCTCGCCAGCCCCCTCGCCGACCACCTCGACCGGGGGCCCTGCTTCGTGCCCCAACCGGACCTACAGCAACAGTACACGCCGTACTTCAAGGAGACGAGACCGAGCCACATGCTCAGCACGGGAGGGTTCCCGCTGCATTATCTGAAACAGAACGGCGTGCTGTCGCTAGAAGGACCGCTAGACCAGTACGCGGCGCCCGAGCTAAGACATTTGCCGGACATCATCCAGCCGGAGCCGCCCAAGGCCAGAAAGCACAACCCTAACTCGGAGCTGCGGCTGTTCAAATGCCTGACGTGCGGCAAGGACTTTAAACAGAAGTCGACGCTGCTGCAGCACGAGCGCATCCACACGGACTCGCGGCCGTACGGCTGTCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCACCTCACGCAGCACCTGCGCATCCATGCGAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCCTTCCGGCAGCGCGCGATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGACGTATCGCCGCATCTCATCTTCAAGAACGGTATGACGCCGACGCTGTGGCCGCAGGACGTACCGTTTCCGCAGGACGAGAACAAAGAGGAGGTGCAGTCGACGTACGGCGACGCGGACGGACAGAACGGGGAGCAGCGCGGCTCGTGCTTCTCCCCCGGGGACACAGCTCAGTACCCCGCCTACTTCAAGGACACGAAGGGCATCAACCACGCCGTGTTCGGCAGCGGTTTGTCTCTGCAGTACTTGAAGGGCGGCAAGCTGCCCGACGTGCTCGGGGGGCGGCCGATGCCGCTGTACGTCCGCTGTCCGATCTGTCAGAAGGAGTTCAAGCAGAAGTCGACGCTGCTGCAGCACGGCTGCATCCACATAGAGTCGCGGCCGTACCCCTGCCCGGAGTGCGGCAAGCGCTTCCGCCAGCAGTCCCACCTGACGCAGCACCTGCGGATCCACACGAACGAGAAACCGTACGGCTGTGTATACTGCCCGCGCTTCTTCCGGCAGCGGACGATCCTCAACCAGCACCTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGTACGCAGTGCGGCAAAGACTTCAGACAGAAAGCGATCCTGGACCAGCACACGCGCACGCACCAGGGCGACCGGCCGTTCTGCTGCCCGATGCCCAACTGCCGGCGGCGGTTTGCGACCGAGCCGGAGGTGAAGAAGCACATAGACAACCACATGAACCCGCACGCGGCGAAGGCGCGCCGCTCGGACGCGAAGACGCCGCGGCCGCTGCCGCCCGCGTCGGCGATGGTGAAGCCGGAGCTGTACTTCCCGGCGCAGTGCTATGCGCCGCCCTTCCAGCAGTTCCCGGCGACGAGCGTGGCCGACTTCAAGCCGGCGGTGGGCCCCGCGCCCGGGCCGTGCCTGCCGGCGCAGTGA
Protein Sequence: MLISKYDSAVRAIQRWRGARASGHAVGRRHAGQRLPAHAAPEPRRALAAARAAAHLASPLADHLDRGPCFVPQPDLQQQYTPYFKETRPSHMLSTGGFPLHYLKQNGVLSLEGPLDQYAAPELRHLPDIIQPEPPKARKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPQDENKEEVQSTYGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGINHAVFGSGLSLQYLKGGKLPDVLGGRPMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRSDAKTPRPLPPASAMVKPELYFPAQCYAPPFQQFPATSVADFKPAVGPAPGPCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: -
80% Identity: -