Zfil021445.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015670.1:3635499-3640296[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00041 0.031 15.3 0.5 1 23 68 91 68 91 0.96 2 28 3 2.2e+02 3.2 0.1 2 22 118 138 117 140 0.88 3 28 0.016 1.2 10.3 2.5 1 23 162 184 162 184 0.98 4 28 4.2e-05 0.0031 18.4 0.6 1 23 188 210 188 210 0.98 5 28 0.029 2.2 9.5 0.3 1 23 244 267 244 267 0.96 6 28 0.34 25 6.1 0.5 1 23 325 347 325 347 0.96 7 28 0.028 2 9.6 0.1 2 23 418 439 418 439 0.97 8 28 1.3e-05 0.00097 20.0 6.0 1 23 443 465 443 465 0.98 9 28 0.0042 0.31 12.1 0.6 1 23 470 493 470 493 0.95 10 28 0.027 2 9.6 1.1 1 23 499 522 499 522 0.91 11 28 6.5 4.8e+02 2.1 0.2 1 23 578 600 578 600 0.93 12 28 9.3e-05 0.0069 17.3 1.3 1 23 668 690 668 690 0.98 13 28 0.00012 0.0086 17.0 0.1 3 23 696 716 695 716 0.97 14 28 0.05 3.7 8.7 1.3 1 23 724 747 724 747 0.89 15 28 0.0034 0.26 12.4 0.5 1 23 753 776 753 776 0.96 16 28 0.22 16 6.7 3.6 1 23 782 805 782 805 0.96 17 28 0.097 7.2 7.8 2.6 1 23 811 833 811 833 0.97 18 28 1.8e-06 0.00013 22.7 0.5 1 23 839 861 839 861 0.99 19 28 6.6 4.9e+02 2.1 3.0 1 23 888 910 888 911 0.92 20 28 0.69 52 5.1 0.1 2 23 933 955 933 955 0.96 21 28 0.84 62 4.9 4.5 1 23 977 999 977 999 0.95 22 28 0.0018 0.14 13.3 1.4 1 23 1003 1025 1003 1025 0.98 23 28 0.026 1.9 9.7 0.1 1 23 1030 1053 1030 1053 0.94 24 28 0.0058 0.43 11.7 1.7 1 23 1059 1082 1059 1082 0.95 25 28 0.31 23 6.3 4.7 1 23 1089 1112 1089 1112 0.94 26 28 0.0047 0.35 12.0 3.2 1 23 1118 1140 1118 1140 0.96 27 28 2.1e-06 0.00016 22.5 1.2 1 23 1146 1168 1146 1168 0.99 28 28 0.00039 0.029 15.4 3.4 1 23 1174 1196 1174 1197 0.96
Sequence Information
- Coding Sequence
- ATGGAGGCAAACATAAGCGTTAAACCAGTTAGGAGGTTAAAGGAGATTGTAGGAGCGCGACAGATGCGCAGACGCCGCCGTGCCAACAACCAGTTGTACGAGGAGTCAGAGAAACGAATAGAAAAAACCATGATGCGTCGGAATGCAATGACTCTTCTAGAGTTTTCTACCGCTTGGGCCTTTAGATGGTTCCGAAGCTCCTTTTACTGCTCATATTGCGACACCAAATTTATTGACTCGGAACCCTTGCGCGAGCATGTCCAATCAAACCACTTAGTAGAACCTCCCAGTAAAAGGATCTTCTCGAAGCTAACAGAAAATAATATGGTCAAAATAGATATAGCTCATTTAAATTGTAGGTTATGTAATCTAAATCTAAATGATACAGACGCTTTGAAAGACCACTTAGTGGCAGCTCATGAAAAAGTATTTAACCTAGATTTCAGTTTAGGCGTTCTTCCGTTCAAGTTGAATGAAGACAGATTTTACTGTCAACAATGTTTAGTTAAATTTACAAAGTTCAGCAAACTGAACGAACACGTCAACACGCACTATCAGAATTATGTGTGCGATGCTTGTGGCAAGGCGTTTGTGTCGAAGTCGCGTTTTCGCAAACACGTGCAGTCCCACGAGACTGGTAGCTTTCCGTGTGGGCAATGTGAGGAGATACTGAAGTCGCGTGCAGCTCGCACCTGCCATATATTACGAGCGCACAGGAAAGGCATTCGATACACTTGCCCTCGATGCCTTGAAGGGTTCACGTCCTATTACGCTAGAGTGAAGCATCTACGTGACGCGCATGAGCAACGATCCGATGGCGAAAGATCGTCCGAAGCTTCCCACCTTACGAATGACGGAATACCCGTCAAAATAACATGGACTCGTAAACGTCAAATGTACGAAGACGAAGCTAATGCCGCTATCATACTACAGAATTCCAATGCTGTTGCATTTAGGTTCAATCGAGGGAAATTTCAATGTGCATATTGTCCCGAAATTCATGTTGATCCAAAACTATTGCGCAATCATTCTCAACAACACGAGAATAAAATAGAAATGTTCCAAAATAGACAGGCTCGCAATTCGTTTCCACTGCGTTTAGACATAAGCGATTTGGAGTGCAAGCTTTGTGGTTTGGGAATTCTCAGTATAGAGGATCTGAAATCCCATTTATCTAAAGCGCATTCGAAGGCTCTAGACCCGGAATTCGGTGACGGTGTAATGCCTTACGTGCTAATTGGCGACGGGAATAGATGTGTGCTCTGTGGTCAGCTGTTCCAAGGTTTTAGCAGTCTCCTTGCACACATGAACGTACATTATAAAACATATGTTTGCCACATTTGTGGAAAAACATTTTCTTCGAAGCAGAAACTTTGCACGCACCGGCTTAGTCACGAGACAGGACAGTTTAAATGCCCGAAATGTGACTCAATGTTCAATAGTCGAACAGCGAAGAACCGTCACGTGGCTTCTGTGCACGCAACGAAGGATAGATATCGGTGTCCCGTCTGCAACATAAACTTTTCCTCTTACCATTCCCGTTTGATGCACCTCGATCAGGTGCACGATCAAAAAGCTGTGTACCCTTGTGGATTCTGCCCGTCTGTATTTGGATCCCTCGAAGTGAAACTTAAATGGAAACCAAGACGCAAGTTTAACGATCACAGACACAATGCTGGAGTAATTATCGAGTTCTCCAACGTGACACCATTCAGGTGGAACCGGGGCGTGTTCACGTGCGGCTTTTGCCCCTTCACCTCTGGGGACTTTGCTCAAATAAGGGAACATACTCTAGAGCACCAGAACCGATTAGCGATCCTGCGGGACGCTCGCATACAAGATTCGATTAAAGTAGAAATAAGCGATCTCCGTTGTGAGATTTGCTTTGAAAAGATGCAGGACATCAAGTCGCTGGCCGATCACTTGGTCAAAGAGCACAACAAACACATCGAAGACAAATATGAAATCGGTGTCATACCTTTCTTGTTTCAAGGCAGCGATTATGTGTGTCTCTTTTGCGACGAACGTTTTCCGTATTTCACAAACTTGAACAAACACCTGAACACGCATTATCCGAACAATATTTGTCCGGAATGCGGCAAAGCGTTTTCGGCTGCGCACAGGTTAAAAGCGCATTTGCTGATACACGAAACGTCTAATACTGCAACACACTCGTGCTCGCGATGCGGGGAAGTGTTTGCTACTAGAGTCCTCAGGAACAAACATTCATCTTACGTACACGGCCCAAAGTATAAATATAAATGCCCGATATGCAGTATGTCCTTCAAACTGTACGGTGATCGGGCGAAGCATTTAAAGCTAATGCACGACAAGAAAATCGAGTTTCCTTGCCATCTTTGCTCCGCCGTATTTTCTTTGTGCAATCAACGAACAAAACACATTAAGCAAGTCCATACAAAGCCGATGGATTTCTGCTGTGACGTCTGCCCGTCTCAGTTTGTGACGGCTGGCCAGTTGAAATGTCACATGATCAAACACGATGGCGTCAGGAAGTTTCAATGCGAAGTGTGCAAGAAGGCATACGCGAGAGCGAAGACTTTAAAAGAGCATATGCGTATACATAATAACGATAAGCGAAATAACTTGCACATAATTATGGAATCTTGTACCGCCTGCCCTTTCAAATATAGAAGTGGCACTTACTTATGTTTTTTCTGCAAAAGCGATTTCTTTGAACCCGAGAAATTGCGAGAGCATACGCTAAGACACCATTCGAGTGTGCAACTGTGTAAACCGAGAAAATACGAACCGATCAAAATGGACTTCTCTGACGCGACATGTAAACTTTGCGGCGCAGAAATAATTGATTATAATTTCTTAAAGCTACATTTGAAAGTTGAGCACGGCAAGCATATCGACTGTTCGCACGGGGACTGTGTGCTGCCTTACAAACTGAGCAAAGGCGAGCACTGCTGCTTGGTTTGTGGTGAGCGCTACGAGGTGTTTCTGAGCCTCCATAAGCATATGAACGAGCATTACGAACACTACATATGCGAAACATGCGGCAAAAAATTCGCTACCGCCCAAAGGATGCACAGCCATGCGCAGACGCACGTGCGCGGAAGTTTCCCCTGCAAACGTTGCGATGAAACTTTCCCCTCGTTGGCCACAGTGTACTCTCACGTTGCTAAAATCCATAGATCGAACAAGCGATACAAATGTCCCATATGTAGCGAAAAGTTTGTTTCGTACAAACACCGATTGACACATTTGACCATCGTGCACGGTGAAAAAACGGCCGAGTTCTGCTGTCCGTTTTGTCCGAAAGTGTTCGACTTGTGCAGCCGGCGCACAGCACATATTAGATTCCAACATTTGCAAGAGCGTAATCACGTTTGTGAGGTGTGCGGAATGAAATTCTTCACCAAGTACGAACTCCATGAGCACTCGATAAAACATGGCGGTGAAAGGATATACCAATGCGATATTTGTAAGAAATCGTATGCGAGGATGAAAACGCTGCGTGAGCATATGCGTATACACAATAATGATAGAAGATTTGTATGCTCGGTCTGTGCGCAATCTTTCGTGCAGAAATGTAGCCTGAAACAGCATGTTAGGGTGCATCATCCGGTACAGTTAAAGATTGATCTGTTCTAG
- Protein Sequence
- MEANISVKPVRRLKEIVGARQMRRRRRANNQLYEESEKRIEKTMMRRNAMTLLEFSTAWAFRWFRSSFYCSYCDTKFIDSEPLREHVQSNHLVEPPSKRIFSKLTENNMVKIDIAHLNCRLCNLNLNDTDALKDHLVAAHEKVFNLDFSLGVLPFKLNEDRFYCQQCLVKFTKFSKLNEHVNTHYQNYVCDACGKAFVSKSRFRKHVQSHETGSFPCGQCEEILKSRAARTCHILRAHRKGIRYTCPRCLEGFTSYYARVKHLRDAHEQRSDGERSSEASHLTNDGIPVKITWTRKRQMYEDEANAAIILQNSNAVAFRFNRGKFQCAYCPEIHVDPKLLRNHSQQHENKIEMFQNRQARNSFPLRLDISDLECKLCGLGILSIEDLKSHLSKAHSKALDPEFGDGVMPYVLIGDGNRCVLCGQLFQGFSSLLAHMNVHYKTYVCHICGKTFSSKQKLCTHRLSHETGQFKCPKCDSMFNSRTAKNRHVASVHATKDRYRCPVCNINFSSYHSRLMHLDQVHDQKAVYPCGFCPSVFGSLEVKLKWKPRRKFNDHRHNAGVIIEFSNVTPFRWNRGVFTCGFCPFTSGDFAQIREHTLEHQNRLAILRDARIQDSIKVEISDLRCEICFEKMQDIKSLADHLVKEHNKHIEDKYEIGVIPFLFQGSDYVCLFCDERFPYFTNLNKHLNTHYPNNICPECGKAFSAAHRLKAHLLIHETSNTATHSCSRCGEVFATRVLRNKHSSYVHGPKYKYKCPICSMSFKLYGDRAKHLKLMHDKKIEFPCHLCSAVFSLCNQRTKHIKQVHTKPMDFCCDVCPSQFVTAGQLKCHMIKHDGVRKFQCEVCKKAYARAKTLKEHMRIHNNDKRNNLHIIMESCTACPFKYRSGTYLCFFCKSDFFEPEKLREHTLRHHSSVQLCKPRKYEPIKMDFSDATCKLCGAEIIDYNFLKLHLKVEHGKHIDCSHGDCVLPYKLSKGEHCCLVCGERYEVFLSLHKHMNEHYEHYICETCGKKFATAQRMHSHAQTHVRGSFPCKRCDETFPSLATVYSHVAKIHRSNKRYKCPICSEKFVSYKHRLTHLTIVHGEKTAEFCCPFCPKVFDLCSRRTAHIRFQHLQERNHVCEVCGMKFFTKYELHEHSIKHGGERIYQCDICKKSYARMKTLREHMRIHNNDRRFVCSVCAQSFVQKCSLKQHVRVHHPVQLKIDLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -