Zfil021412.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015670.1:3449139-3454771[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0086 0.64 11.2 0.2 1 23 79 102 79 102 0.93 2 27 1.5 1.1e+02 4.1 0.2 2 23 129 151 128 151 0.92 3 27 0.44 33 5.8 4.1 2 23 174 195 173 195 0.97 4 27 3.2e-05 0.0023 18.8 0.5 1 23 199 221 199 221 0.95 5 27 1.9e-05 0.0014 19.5 0.4 1 23 309 332 309 332 0.93 6 27 1.5 1.1e+02 4.1 0.2 2 23 359 381 358 381 0.92 7 27 0.18 13 7.0 3.3 2 23 404 425 403 425 0.97 8 27 3.5e-05 0.0026 18.7 0.2 1 23 429 451 429 451 0.95 9 27 0.00095 0.07 14.2 0.1 1 23 539 562 539 562 0.93 10 27 1.5 1.1e+02 4.1 0.2 2 23 589 611 588 611 0.92 11 27 1.8 1.3e+02 3.9 3.6 2 23 634 655 633 655 0.96 12 27 0.19 14 6.9 0.6 1 23 659 681 659 681 0.91 13 27 0.025 1.9 9.7 1.4 1 23 686 709 686 709 0.95 14 27 0.28 21 6.4 1.3 1 22 715 736 715 738 0.90 15 27 7e-05 0.0052 17.7 0.9 1 23 745 768 745 768 0.97 16 27 0.00016 0.012 16.6 2.8 2 23 775 796 774 796 0.96 17 27 8.4e-06 0.00063 20.6 2.7 1 23 802 824 802 824 0.99 18 27 0.092 6.8 7.9 0.1 1 23 926 949 926 949 0.93 19 27 1.3 95 4.3 0.3 2 23 976 998 975 998 0.90 20 27 1 75 4.6 2.7 2 23 1021 1042 1020 1042 0.83 21 27 0.11 7.8 7.7 3.3 1 23 1046 1068 1046 1068 0.97 22 27 0.029 2.1 9.5 0.4 1 23 1073 1096 1073 1096 0.92 23 27 0.0076 0.56 11.3 0.3 1 23 1102 1125 1102 1125 0.92 24 27 0.00028 0.021 15.8 3.5 1 23 1132 1155 1132 1155 0.97 25 27 0.00021 0.015 16.3 0.5 1 23 1161 1183 1161 1183 0.97 26 27 1.1e-06 8.4e-05 23.4 1.1 2 23 1191 1212 1190 1212 0.97 27 27 5.5e-05 0.0041 18.0 2.4 1 23 1218 1241 1218 1241 0.98
Sequence Information
- Coding Sequence
- ATGCCCCGTGCGAAGTCATCGCACCTGACGAAAGGAAAAACAGTCACCAGCGCCTTTTTTAAAAAGAAATTGTCCCGCCTCAATACAGAAATGAAACGAACTTCGGTCAATAATACTTTGAATTCACCTTTAAAAGTTGATGCGGCGACAATAATCGAACAAATGCGGCATAATTGTCATCAAATTCTCAAATACACCAACGCCACACCGATCCGGCATCACGACGGCACCCAATACATATGCGCGTTCTGCAAGGAGGCGTACGTCAAGCCATCGCAGCTGAAACTGCACACGCTCGAGACGCACAATCATAACGATAAAACCAACTTTTTGAATGAAAGAGGCGCAACCGAATTCAAATTAAAACTTGACATCACATCGCTACAGTGTGATCTATGCAAATTAGAGTGTGAAACACTGGAAGATATGATCGAGCATCTGGTCAGCGTTCATGATGTCGACTTTCATCCAGACGTTAACAATCAGATTATGCCGATGAAGTTCACCGGCGGGAATCTGACATGCTTCATTTGCCATAACGTTTGCACCAGCTTCAAATTTTTAGTATTGCATATGATCACGCATTACGGCAAATTTTTATGCGACCTTTGCGGCAAAGCCTTCATCAATACGAGCAGTTTGGCGTCCCATAAGAAAACCCACTTGGTCGGTAAATTGGAGTCTGCAGCGAAGCCCCATGCGAAGTCATCGAACCTGACGAAGAGAAAAACATTCGCCAGCACCTTGTTAACAAAGAAATTGTGCCGTCTCAATACAGAAATGGAACGAAAGTCGGTTATGAATACTTTGAATTCACCTTTAAAAGTTGATGCGGCGACAATACTCGAACAAATGCGGCATAATTGTCATCAAATTCTCAAATACACCAACGCCACACCGATCCGGCATCAAGACGGCACCCAATACAAATGCACATTCTGCAACAAGGCGTACGTCGACCCGTCGCAGCTGAAAGCGCATACGCTCGATATGCACAATTATGATGACAAAACCAAGTTTTTGAATGAAAGAGGCTTAACCGAATTCATTGTAAAACTTGACATCACATCGCTACAGTGTGATCTATGCAAATTAGAGTGTGAAACACTGGAAGATATGATCGAGCATCTGGTCAGCGTTCATGATATCGACTTTCATCCAGATGTTAACAATCAGATTCTGCCGATGAAGTTCACTGGCGGGAATCTGACATGCTTCGTTTGCCATAACGTTTGCACCAGCTTCAAACTTTTAGTATTGCATATGATCACGCATTACGGAAACTTTTTATGCGATTATTGCGGCAAAGCTTTCATCAATATGAGCACTCTGGTTGCCCATAAGAAAATCCACTTGGTCGGTACATTCGAGTCTGCAGCAATGCCCCGTGCGAAGCCATCGTACCTGACAAAGGGAAAAACAGTCGGCAGCACCTTGTTTAAAAAGAAATTGAGCCGCCGCAATATAGAAATAAAACGAAAGCCGGTTATGAATACTTTGAAATCATCTTCAGAAGTTGATACGGTGAAAAGAATCGAACAAATGCGGCATAATTCTCATCAAATTTTCAAATACACCAACGCCACACCGATCCGACGTCACGACGGCACCCAATACATATGCGCATTCTGCAACGAGGCGTACGTCGACCCGTCGCAGCTGAAAGCGCACACGCTCGAGACGCACAAGCATGACGACAAATCCAAGTTTTTGAATGAAAGAGGCTTAACCGAATTCATTGTAAAACTTGACATCACATCGCTACAGTGTGATCTATGCAAATTAGAGTGTGAAACACTGGAAGATATGATCGAGCATCTGGTCAGCGTTCATGATGTCGACTTTCATCCAGACGTCAACAATCAGATTGTGCCGATGAAGTTCACCGGCGAGAATCTGACATGCTTCGTTTGCCATAACGTTTGCACTAGCTTCAAAGTTTTAGTGTCGCACATGATCAAGCATTACGGCAACTTTTTATGCGACCTTTGCGGCAGAGCTTTCATCAGTATGAGAACTCTGGCTTTCCATAAGAAATCCCACCTGGTTGGTACATTCGCGTGTCAGATGTGTGAAAAAGTATTCGAAACCGATGCAAATCGACAACAACACTACCACAGAGTTCACAATAGGTGTAAAAACTATAAATGTGGCTTTTGCTACGAGAAGTTCGAAACTTACGACGAGAAAATGAAACATTTGGTGGCCAAGCACGATGTCCCCAGTCATACATTCAGGTGTAATGTTTGCGACAGGCTTTTCAGGAAAGCTGTTAATTTGACAGTACACACAAAGAGAGATCATTTGATGGAGAGAAACTGCAAGTGCTCCCAGTGTGGAAAGGCCTTCTTCGGGCAAAGAGATCTCAAAAATCACATGGTGAGGCATGAAACCCAATCTAGATTCCAGTGCGGCACTTGTTCGAAGTTTTTCAAGTCCAAGAAGACATTGAGAGCTCACTTGAGAATACACTTGGACGACAGAAGGTTCAAATGTTTGCACCGCATCTCAATATCGCCGTCTATATTGGCCAAATTGACTACAGAGGGATCTGTTAAAGTCAGATGGTCGCGAGCTGCAATATCCCGTCTAAAACCATCAAATGTAACGGAGAAAAATCCTGTTGTCCACGACGTGCCAAACCAAGGAGGGTCTCGCGTTAAGTTAGCACAACGGACACAGGTATCGAGAATCCTGGAAAAAATGAGACACAACACTCTAAAATTATTCGAATGTACCAACGCAACTGCAATTCGGCGTCACGACGGCGTTAAATACAGCTGCGCTTTTTGCAGCGAGGCGTTTGTCGCTCCGAAGGAGCTGAAATACCACACGCTTGCGATCCACGAAAATGACGACAAAACTGGGTTTTTGAGAGAAAGAGGCTTGGCTGAATACATAGTGAAAGTTGACATCACATCGCTACAGTGTAAGCTATGCAATTTAACGTGTGAAACAGTCGAAGATGTTTTCGAACATCTGGCGGAAGCGCACGACGTCGTCATTTACAAAGATGTCAACAGTCAAATTCTGCCGTTCAAGTTTACCGATGAGAATTTGACATGTTTCGTTTGCCAAAACTGCAGCACCAGCTTCAAGATGTTGCTGATGCACATGGTTACGCACTACGGCAGTCATTATTGCGATATTTGTTCCAAACGCTTCCTCAACACGCGAACATTGGCCAGCCATCGGCAATCTCACTGCAGCGGTGTGTTCGAATGCGAGAAGTGTGAAAAAATATTCGACACGGCCGGAAAGCGGAAACTACACACGGTTCGGGTTCACACAAAGCCTAACCTCTACAAATGCGGTTTTTGCGGGGTGAAGTTCGCTAGTTACGATGAGAAAAGGAATCATATGGTAGCAGACCACGATATGCCCTCTCACGCATTCAAGTGCCACGCGTGTGAAAAGGTGTTTCGGAAAGCGTACCAATTGACGCTTCACGTAAAGAAATATCATTTGTTGGAACGGAACCATGTGTGTCCCGATTGCGGGAAGGCATTCTTTGCGGTGAGGTATTTGAGAGAACATATGACTATGCACGACCCGCATGCGCCCAAGATCGTCTGCAGTTTATGCGACAAAAGCTTCAAATACAAAAAGTCTTTCCAAGCCCACATGAGGATACATTTGGACGATCGTAGGTTCAAATGCGACCAGTGCGGGATGTCGTTCATCCATAATGTCTCGTGGAGGTCCCATATGAAGAGTAAACACGATGTAATCATACCGGTGAGACCACACGGACGCATACGGGTGAAGCCCGCTTCCGATCAGGAATAG
- Protein Sequence
- MPRAKSSHLTKGKTVTSAFFKKKLSRLNTEMKRTSVNNTLNSPLKVDAATIIEQMRHNCHQILKYTNATPIRHHDGTQYICAFCKEAYVKPSQLKLHTLETHNHNDKTNFLNERGATEFKLKLDITSLQCDLCKLECETLEDMIEHLVSVHDVDFHPDVNNQIMPMKFTGGNLTCFICHNVCTSFKFLVLHMITHYGKFLCDLCGKAFINTSSLASHKKTHLVGKLESAAKPHAKSSNLTKRKTFASTLLTKKLCRLNTEMERKSVMNTLNSPLKVDAATILEQMRHNCHQILKYTNATPIRHQDGTQYKCTFCNKAYVDPSQLKAHTLDMHNYDDKTKFLNERGLTEFIVKLDITSLQCDLCKLECETLEDMIEHLVSVHDIDFHPDVNNQILPMKFTGGNLTCFVCHNVCTSFKLLVLHMITHYGNFLCDYCGKAFINMSTLVAHKKIHLVGTFESAAMPRAKPSYLTKGKTVGSTLFKKKLSRRNIEIKRKPVMNTLKSSSEVDTVKRIEQMRHNSHQIFKYTNATPIRRHDGTQYICAFCNEAYVDPSQLKAHTLETHKHDDKSKFLNERGLTEFIVKLDITSLQCDLCKLECETLEDMIEHLVSVHDVDFHPDVNNQIVPMKFTGENLTCFVCHNVCTSFKVLVSHMIKHYGNFLCDLCGRAFISMRTLAFHKKSHLVGTFACQMCEKVFETDANRQQHYHRVHNRCKNYKCGFCYEKFETYDEKMKHLVAKHDVPSHTFRCNVCDRLFRKAVNLTVHTKRDHLMERNCKCSQCGKAFFGQRDLKNHMVRHETQSRFQCGTCSKFFKSKKTLRAHLRIHLDDRRFKCLHRISISPSILAKLTTEGSVKVRWSRAAISRLKPSNVTEKNPVVHDVPNQGGSRVKLAQRTQVSRILEKMRHNTLKLFECTNATAIRRHDGVKYSCAFCSEAFVAPKELKYHTLAIHENDDKTGFLRERGLAEYIVKVDITSLQCKLCNLTCETVEDVFEHLAEAHDVVIYKDVNSQILPFKFTDENLTCFVCQNCSTSFKMLLMHMVTHYGSHYCDICSKRFLNTRTLASHRQSHCSGVFECEKCEKIFDTAGKRKLHTVRVHTKPNLYKCGFCGVKFASYDEKRNHMVADHDMPSHAFKCHACEKVFRKAYQLTLHVKKYHLLERNHVCPDCGKAFFAVRYLREHMTMHDPHAPKIVCSLCDKSFKYKKSFQAHMRIHLDDRRFKCDQCGMSFIHNVSWRSHMKSKHDVIIPVRPHGRIRVKPASDQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -