Zfil021398.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015670.1:3395643-3399415[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.98 73 4.7 0.3 5 23 148 167 145 167 0.91 2 28 0.029 2.1 9.5 6.2 1 21 172 192 172 195 0.95 3 28 0.00084 0.062 14.3 0.5 1 23 200 223 200 223 0.95 4 28 0.006 0.45 11.6 1.6 2 23 226 248 225 248 0.95 5 28 0.46 34 5.7 2.0 1 23 323 346 323 346 0.93 6 28 0.095 7 7.9 0.4 2 23 374 396 373 396 0.94 7 28 0.0039 0.29 12.2 0.1 1 23 418 441 418 441 0.95 8 28 1.4e-05 0.0011 19.9 0.5 3 23 448 469 447 469 0.97 9 28 0.0077 0.57 11.3 2.0 1 23 474 497 474 497 0.94 10 28 0.0008 0.06 14.4 0.2 2 23 503 525 502 525 0.94 11 28 0.003 0.22 12.6 3.9 1 23 529 552 529 552 0.97 12 28 0.00029 0.021 15.8 1.0 2 23 559 580 558 580 0.96 13 28 2.4 1.8e+02 3.4 6.4 1 23 629 651 629 651 0.98 14 28 6.6 4.9e+02 2.1 0.0 2 23 679 701 678 701 0.82 15 28 0.0015 0.11 13.6 0.6 2 23 722 744 721 744 0.96 16 28 9.6e-05 0.0071 17.3 0.2 1 23 749 772 749 772 0.96 17 28 0.0022 0.16 13.0 2.3 1 23 777 800 777 800 0.97 18 28 0.0028 0.21 12.7 1.6 2 23 803 825 802 825 0.94 19 28 0.023 1.7 9.8 2.1 2 21 832 851 831 852 0.94 20 28 0.0082 0.61 11.2 1.7 1 23 907 930 907 930 0.97 21 28 5.5 4.1e+02 2.3 0.0 3 23 959 980 957 980 0.93 22 28 0.00018 0.014 16.4 0.1 2 23 1002 1024 1001 1024 0.94 23 28 1.5e-05 0.0011 19.9 0.3 3 23 1031 1052 1029 1052 0.95 24 28 0.16 12 7.1 5.5 2 23 1057 1079 1056 1079 0.93 25 28 0.00043 0.032 15.2 1.1 1 23 1084 1107 1084 1107 0.97 26 28 0.0013 0.096 13.7 6.9 1 23 1111 1134 1111 1134 0.97 27 28 0.0032 0.24 12.5 0.7 3 23 1142 1162 1141 1162 0.97 28 28 1e-05 0.00075 20.4 0.2 1 23 1168 1190 1168 1190 0.97
Sequence Information
- Coding Sequence
- ATGAATGTTACATCGCTAAATGAGATGTACAGAATAGTTTTCTTTGCAGATAAAAATTCGCCGCCAAGAAAGAAAGCGATAGAGTCTCGGAGACGGAACCTTCTGATATTGTTCAATTATACGTCCCTGATACCATTTAAATGGCGTCGCAAATATTTATGCTTTTACTGTGGCGACGACGCTCGTGATTGCATTGCCCTGAGGGAACATACAAAAGCCCATGGTCTTTGCTCATTGACAGATCGAGCTTTAAAATTGGTCAAGTCCAACGAAGTAGAAGTGAAAATCGACGTATCTATCATCAAATGCGAGTGCTGCCTCGAGACATTCGAGAAAATCGATGATATAATCGATCACCTAATATTTAAGCATGATCATCCTTACAACAAGGAAATCGATATGTTTATAACACCGTATCGGTTAGAAGATCTCGCATGCATTATGTGCAATGAAACATTCGATTTCTTAGGAAAACTTATAACGCACACCAATTTAAAACATCCACGGAAAGTGTACTTTTGTGACAAGTGCCGTCGAAGGTTTAGCAAAAAGCGTGACCTCGATTCTCATATGCGGTGTTACCATAAAGAAAATGGCTATCTTTGTGTAGATTGCCGTAGAATTTTTCCGTCTAACTGGTCGCTGCGTACTCATAGGATGACGATGCACACGTCTATGTGTAATGTCTGCTTCAAAACTTTCTCGTCCGCCACCAAAAGGTTAAGGCATATCAAATTACAACACAAGGACGTCTTTCAATGCGGCTTTTGTTTGAAGTTTCAAAGTACGAAACAGGGTTTTCTGCGACACGCTACGGCGTGTGAAAGACAAATGGAGGGCAACGATAAATATAAACAGCTGGAAACAATAAAACGCGAAATAAAACCTTCTGTAGTACAAATGAGAAAGAACATAGCATGTCTGATAAACATGTCCACAGCGATGCCGTTCAAATATTTCACAAAGTTCAGATGCTTTTTCTGTTCTCAGGATTTTGCCGAGTGCGATCTTTTAAAAGAGCACACGGTAGTGAATCACCCCGTTTGCGAGCCTAAAATGAAATGTCTGAGACTGCGCAATAGAAAGGACAACTGCATCAAACTAGATATATCTTCCCTATCATGTAAAATATGTTGCGAGTCTTTCATTGATTTAGATAAGTTGATAGATCATTTGACGGTCGAACACAAAGCTCAGTACGATAAATCTGTTGAGTTGAATCTGCTGTCGTACAAGTTGATAAAATATAACTATCCCTGTCCTATTTGCGGTGAAGTATACCGTTACTTCAGTATATTATTGAAACACGTCAGCCGAAGTCACTCCGACAACAACATCCTATGTATGTACTGCGGAAAGTCATTCAGATCCGAACCCAATTTGCGCGCACACATTTCGCGGCGTCACAAACATGGAACGCACAAGTGCACAAAGTGTAGACTAGAATTCACTTTGAATTCTGAATTTCAAGCCCATCTAGGCAAAGTTCACGGTAGCAAAGTTGTGAAGTGCAACGTGTGCCCTGAAATGTTTACGTCCCAGTACGCGAAACAACGGCATTTAATAAACGCTCACGACTTGGGTCACAAGTGTTCTTACTGCAGCAGATCGTTTATTAAGAACTCGTTCATGGTTAGCCACGTCAGGCGGCTGCATTTGAAGGAGAAGAACGTAAAATGCCCAATCTGTGGCGAAATGTTCTTCGACGCACACCGTCTCAAAAAACACACGGTCAAACATGTGGGAGAGAGAAACTTCCACTGCGATATATGCGATGAATATGCGCCAGCCGCAATCGACGAGTGTAACTCTGAGCGAAGAAGGCGAAACTTACAGATACTCTTCAACTCGACGACAGTAATGCCATTCAAATGGCGCGGGAGGTACGTGTGTTTCTATTGCGGCGAAAACCACACGCAGTACTGCGATTTCAGAGAACACACGAAAACACACGGCGATTGCACCACTAAAGATTATTCCTTGAGAGTCATAAAAGGGAGTTGCGTAGAAATCAAAGTTGATGTTTCTGAAGTATCGTGTGCCATATGCCAAGAACCGTTTGCGAATGTTCTCGAGATAATCGACCATTTGATAGAAAAACACAAATTGCTATACGACACTACAATCGATATGCCGTATCAAGAGTATAGACTGAGCGATATGAAATGTTTGGAGTGCGAGAAACAGTTCAGGTACTTTGGTACGTTGGTGAATCATATGAACAATGCGCACCCTAAAAACGAGTTCATATGCGACGATTGTGGTGCCACCTTCAATAAGAAACGCGACCTGGCCGGCCATATAAGGCTGTACCATCGCCCCGGGGGTTACCCCTGCAGAGAATGTCATGAGAATTTCATTTCGTTCCCCAAACTGCGCAAGCATCAGAATAGTTCCCACTTTAGTCGATGTAAAAACTGCAATCTGACTTTTCAAAATTACACATTCCTTCAGAAACATATGCTGGCAGACCATCCGAAAAATAGAGAGATCACTTGTGGGCATTGTTCGAAGAAATTCCATTCGACACAAGGCCTAACGCAGCACATTAACAAGTGTAAAGTCAGACTGATCAAGCAGGAAAACTTACAGCCTCCCAAACTTTTGGATTCGAAGCAAATAGTATGTAGAACGAAGCAGAATCTAAAGCAGATAAGAGCTAACATACAATACGTCCTCAACATGTCAACAGCGGTGCCGTTCAAGTTTTTCACCAAATTCACGTGTTTCTTTTGCTCTAAAAAGTTCGACGACTTCGAAGATTTGAAGGGACACACGATGTCCGAGCACCCCGTTTGCGAGACGAAAGCTAAATGCATGAAGAAATGCCGGGGCGAAAAGATCATAGTCAAAATAGACGTCACCAAGTTGGCTTGCAAACTGTGCAGTTCACCCATGAGCGATCTAGAGGAGTTGATCGAACATCTCATGGTTGCACACAACGCTGACTACGATAAATCCATAAAGTGTTTCGAAGTATTCAGGCTAGTGAAAGACAACATACCATGTCCGATATGCAAGAGAATCTTCAGGTATTTCGGTTTGCTGCTTCGGCATATGAACGCCGAGCACAACAACAACAACGTGATATGCGACATATGCGGCAGGAGTTTCAAGAAAGTCACCAATCTGAAGGTGCACATGCTGTACTTCCACGTGGGGGCGTGCGACTGCGACGTGTGCGGCGCGCACTTCAACAACCGCTGGTGCCTGTCGCGCCACAAGGCGAAGTACCACAACGCGAAGGAGCACAAATGCCCCAAGTGTCCGGAAGTGTTCGAATCCAATTACAAGAAAGCGAAGCACATGATCAAAGCGCACGGGACGGGCCACGAGTGCGTCCATTGCAAGAAGATGTTCACGCGCAACTCGTTCATGAAGAACCACGTGCGCCGGACGCACTTCAAGGAGAGAAACGTCGCGTGCACCCTGTGCAGTGAGAACTTCTTCGACAACTACTCGCTGAAGATGCACATGGTGAAGCACGACGGCGAGAGGCGGTTCGCGTGCGACGTGTGCGGCAAGGCGTTCCTTAGGCGCAGCAATCTCAATTCGCATATGGATATGCACAAGAAATACGGCCACATGCAGTAA
- Protein Sequence
- MNVTSLNEMYRIVFFADKNSPPRKKAIESRRRNLLILFNYTSLIPFKWRRKYLCFYCGDDARDCIALREHTKAHGLCSLTDRALKLVKSNEVEVKIDVSIIKCECCLETFEKIDDIIDHLIFKHDHPYNKEIDMFITPYRLEDLACIMCNETFDFLGKLITHTNLKHPRKVYFCDKCRRRFSKKRDLDSHMRCYHKENGYLCVDCRRIFPSNWSLRTHRMTMHTSMCNVCFKTFSSATKRLRHIKLQHKDVFQCGFCLKFQSTKQGFLRHATACERQMEGNDKYKQLETIKREIKPSVVQMRKNIACLINMSTAMPFKYFTKFRCFFCSQDFAECDLLKEHTVVNHPVCEPKMKCLRLRNRKDNCIKLDISSLSCKICCESFIDLDKLIDHLTVEHKAQYDKSVELNLLSYKLIKYNYPCPICGEVYRYFSILLKHVSRSHSDNNILCMYCGKSFRSEPNLRAHISRRHKHGTHKCTKCRLEFTLNSEFQAHLGKVHGSKVVKCNVCPEMFTSQYAKQRHLINAHDLGHKCSYCSRSFIKNSFMVSHVRRLHLKEKNVKCPICGEMFFDAHRLKKHTVKHVGERNFHCDICDEYAPAAIDECNSERRRRNLQILFNSTTVMPFKWRGRYVCFYCGENHTQYCDFREHTKTHGDCTTKDYSLRVIKGSCVEIKVDVSEVSCAICQEPFANVLEIIDHLIEKHKLLYDTTIDMPYQEYRLSDMKCLECEKQFRYFGTLVNHMNNAHPKNEFICDDCGATFNKKRDLAGHIRLYHRPGGYPCRECHENFISFPKLRKHQNSSHFSRCKNCNLTFQNYTFLQKHMLADHPKNREITCGHCSKKFHSTQGLTQHINKCKVRLIKQENLQPPKLLDSKQIVCRTKQNLKQIRANIQYVLNMSTAVPFKFFTKFTCFFCSKKFDDFEDLKGHTMSEHPVCETKAKCMKKCRGEKIIVKIDVTKLACKLCSSPMSDLEELIEHLMVAHNADYDKSIKCFEVFRLVKDNIPCPICKRIFRYFGLLLRHMNAEHNNNNVICDICGRSFKKVTNLKVHMLYFHVGACDCDVCGAHFNNRWCLSRHKAKYHNAKEHKCPKCPEVFESNYKKAKHMIKAHGTGHECVHCKKMFTRNSFMKNHVRRTHFKERNVACTLCSENFFDNYSLKMHMVKHDGERRFACDVCGKAFLRRSNLNSHMDMHKKYGHMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -