Basic Information

Gene Symbol
ZBED4
Assembly
GCA_907165275.1
Location
OU015659.1:1992980-1997467[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 2.2e-10 3.7e-07 30.6 1.9 2 43 10 50 9 51 0.95
2 10 3.2e-12 5.3e-09 36.5 4.1 3 43 75 115 73 116 0.97
3 10 2.6e-13 4.3e-10 40.0 3.7 3 43 181 221 179 222 0.98
4 10 6.9e-14 1.1e-10 41.8 2.2 3 43 298 338 296 339 0.96
5 10 4.2e-12 7.1e-09 36.1 0.6 3 43 407 447 405 448 0.97
6 10 4.1e-15 6.9e-12 45.8 3.6 3 44 524 565 522 565 0.97
7 10 2e-13 3.4e-10 40.3 1.3 2 43 634 675 633 676 0.96
8 10 9.1e-15 1.5e-11 44.7 3.6 3 44 746 787 744 787 0.97
9 10 4.3e-12 7.2e-09 36.1 2.6 3 43 855 895 853 896 0.97
10 10 9 1.5e+04 -3.4 0.2 5 21 1264 1278 1263 1278 0.79

Sequence Information

Coding Sequence
ATGGCTCAGCGATTTCGTTCATCAGATCATTTATGGGATTACTTTACGAGGATTGAAGGAGACCACAATGCTATCTGTAACCAGTGTTCTAAATTTCTGTCCTTCAAAACTTCTGTCAACAATTTAAAAACTCATTTAAAAATGAAACATGTGGAACAATACAAGTGTTTGTTAAAAGTAACTCCCGAACCTAAATCTCATCGATTTTGTTCATCAAAACATGTATGGAAATACTTTACTGCCTTTAATGAAAAAGACAAGATTGCCACCTGTCACGAATGTTCTAAAGAGCTGTCTTATAAAGGGACAATAACAAATTTATATACTCATTTAAAAATAAAACATACAGACCTTTATGATTCTATTAGAAAAGAGGATATCAAACTCCGAGCCCAAAAACTTAAATTAGAATCAGATGAACCTATCATGTTTATGGTTGTGGAAAACTCAAATTCAATAACTGAAGATGAATTCGATTCTCTGCCTTCTCCTATAATTGCTAGAATTAATGAAGCAAATATAGTTGAATCAAAAAAGTTAATATGGAACTTTTTTTCAAAGGTTTCAGGAAAACATAGAATGGCAACCTGTAACCAGTGTTTTAAAACCCTGTCCTACAGAACTAGCATAACTAATTTAAAAACTCATTTAAATTCCCAACATATTGAACTCTATAATATTTTGATGGCCAATAAAAAACTATCTAAATCTTTGTCAGCTCAAGTACCATCAGAAACAGATGTAAATGAACCTATAATATTTACAGTGGACGAAAATAACTCTGAGGTTGAATCTGAAGAAATCCATAGTGAGAATGAATCTACTTCATCTCAAAAATCCCCTGTAGATACTAAAATGACCGAAGAAACTGAAGTGAAATCAGAAATTACAGTATGGGATTACTTTACTAAGGTCGCTGGAAGAGATAAAATGGCAACCTGTAATAAGTGCTCAAAGTCACTATCTTACAGGACAAGTATCACTAATTTGAAGACCCATTTAAATTGGAATCATATGGAACTATTTAATTCTTTGATGGGTAATAGAAAACAATCTAGGACACAGTTAGTCCAAGATGAAATTACTACATTTGTGACTGAGGAAGAAAACTTCAAGGTTCAATCTGAAGAGTGTTATCATGAAGCTGAATCCTTGCTATTTCAAGAATCAGTAGCTGCCAAAATGGCAAAAAAAAATATAGTTGAATCAACCATTACACTGTGGGACTACTTCTCTAAAGTGGCTGGGGGAGATAAAATAGCAACCTGTAACCAATGTTTAAAAACCCTGTCTTACAGGACTAGCATAACTAATTTGAAAACTCATTTAAAGATTAATCACATAGAACTATTCAATTGTTTGATGGAAAATAGTAAACAGTCCCAATCTCATTCAGTGCGGTCACAATCAGAATTTAGCTCAAAGGAACCTACCATATTTATTGTTGGAGAAGAGCACTCCGATGCTGATTCTGATGAGATCCATTTTAAGGGTGAACCCTTTACATCTGATAAATCCCCAGTTGCTACCGAAATGAATGCAGAAAGTGAAGTTAAATCAAACATTACAGTATGGGACTACTTTTCTAAAGTGCCCGGGAAAAACAAAATAGCAACCTGTAACCAATGCTCAAAATCGTTTTCTTACAAAACTAGCATTACTAATTTGAAAACCCATTTAAATTGTAAACATAAAGAACTATTTAACACTTTGATGGCAAACAGTAAACCTCGGCCCCGGTCAGAGCAGGTACATTCAAAATCGAACCCAAATGAGCCCATGATGTTTGTCATTGAAGAAAACTCGGAGGTTGAATCTGAAGAGATTCGTCAGGACGATGAATCCCTTCCATTTCAAGGATCCTCAATGGCTACTACAATAACTGAAGAATCAAAAAAAAACATATGGGATTACTTCACTAAGATACCAGGAGAAAAATTAATGGCAACTTGTAACCAATGTTATAAAACCTTGTCTTACAAGACTAGCATCACTAATTTAAAAACTCATTTAAGTTTCAAACATATAGAACTTTACAATTCTTTAATAGGAAATAGTACAGAACATCAATACCAGTTAATGCAATCAGATGAGCCTATAATGTTTATGATTGAGGAAAACTCTGAGGTTGAATCTGAAGAGATTCGTCGTGAGGATGCATTTGACCTTCAATTTCAAGAATCCCCTGTGGTTTCCAGGGTTAATAAAGAAAATACGATTCGATCAAATAATATGATATGGTTCTACTTCTCTAAGGTACCTAATAAATGGAAAATTGCAACATGTAATAAATGCTCAAAAAACCTGTCTTATAGGACTAGCATCACTAATTTAAAAACTCATTTAAAACAACAGCATCAAAAAATATTCAACGATTACATAGCTGTAAAAAGTAAATATGACTCATATTTGGCGCATTTAGTGCAAGATCAATCACAAAGTGAATATACTTCACCTTTTGAGTTTATATCTGCAAATCAAGATAGCTCTGAAGATGTATTTCTTCCACCTCGAGAATGCTCCGAGGCTGTTGCACTGGTAAGTGAACAAGAAGATAATAGTTTATGGGATTATTTTACCCGAAATCCTGAGGAAGACAAAACAGCAACTTGCAAGCTATGCTCTCGCCACCTGTCTTATAGGACTTCCATCACCAATTTAAAAATTCATCTAAAATGGAAACATCTGGCTCAATACTATAGTGTTATGAAAGAAAAGAGAAAAAAGCAGAGAACAAAATGGAGTTTTAAAAGAGAACATCCAAATGGCGTTGCCCCATCCGTGCTCCAGTTCAAAGAATTTTGTCAATCTCAAGAACCGCTAGGAATTGCCAAAGTAAGAATAAATGATAACGCACGAAATATAGCAGAAGCGATCAGTATTTTAGAGTGGAACCATTTTAACAGTATATATCATAATCTAAATGAGATATTAAGGTACTCTCTGGGTTTATTTGAAGATATTTTGAAAAAGGTGAAGAGTATAGTTAATTACTATGATTTGAACTCAAATGCTAAAGAAAGACTTTTAGAGCATCAAAGATTGTTGAATAACTCTACCCAGCCTCTAATGCTTATCACGTCAGAAGGTAAGAGATGGAACTCTACATATTTAATGATAAAACGCTTCTTGCATCTTCAAGACTCCGTCGTGGAAACTATGCCTAATCTCGATAATGATCTGCCAGTGATTACCAACGAAGAATGGACCACATTGAGACAACTGAGTTTATTGTTAGAACCTTTTAACGAAGCTATCAAAGAGCTGAGCGCGGAAAAATATGTTTTAGCTTCAAAGGCATTTGCCATCGTAAACGGTTTGAAAGACGTCCTAGAACTGCTTAAAAAAAATCCTGAAAACTATGATGCCATAAATTCCGGGTTCGAAAGCATTGTGTCCCAATTAAATACCCAATTTCATGACCTCGAATGCCATGATGATTTGGCAATGTGCACCTTGTTAGACCCACGATACAAAATGTCTATGTTTGTTGATGAACGCGCTGCTGAAAGGGCCAAATTAAATCTAGTATCAGAAGTAAAAAAATTGATTAATGAAGAAATAGATCAAACCAAATCTAGTGATGAAACGTCAATAAAATCCGACCCAAATCATATGGACACCAGTGAAATCAGCCTTTGGAGAAAGCTAAATTTAGCTTTGAAAGAGAGAAGTACTTCCAACCTCGACGCTCTGGCTATGTCTCAACAAGAAGTAGAGTCTTATATGCAAGATGAGTTCGCACAAAGTAACGATGAACCATGTGAGTGGTGGCGATCAGGACGGCACAAGTACCCGCACCTGGCCAAATTATTCAAAAATAAATGCAACATCGTGGCAAATTCAGTGCCTGTTGAGAGCCTTTTCTCAAAAACCAGCTGTATGGAGTCAGACAAAAAGTTGAAATTATCCGTTAGAAAAACTGAACAATTGGTTTTCCTCACCGCAAATTTAAAAAATTGCGACATTAGAAGACTTATGAATTGGCAAGCAATAAGAAAGTTATAA
Protein Sequence
MAQRFRSSDHLWDYFTRIEGDHNAICNQCSKFLSFKTSVNNLKTHLKMKHVEQYKCLLKVTPEPKSHRFCSSKHVWKYFTAFNEKDKIATCHECSKELSYKGTITNLYTHLKIKHTDLYDSIRKEDIKLRAQKLKLESDEPIMFMVVENSNSITEDEFDSLPSPIIARINEANIVESKKLIWNFFSKVSGKHRMATCNQCFKTLSYRTSITNLKTHLNSQHIELYNILMANKKLSKSLSAQVPSETDVNEPIIFTVDENNSEVESEEIHSENESTSSQKSPVDTKMTEETEVKSEITVWDYFTKVAGRDKMATCNKCSKSLSYRTSITNLKTHLNWNHMELFNSLMGNRKQSRTQLVQDEITTFVTEEENFKVQSEECYHEAESLLFQESVAAKMAKKNIVESTITLWDYFSKVAGGDKIATCNQCLKTLSYRTSITNLKTHLKINHIELFNCLMENSKQSQSHSVRSQSEFSSKEPTIFIVGEEHSDADSDEIHFKGEPFTSDKSPVATEMNAESEVKSNITVWDYFSKVPGKNKIATCNQCSKSFSYKTSITNLKTHLNCKHKELFNTLMANSKPRPRSEQVHSKSNPNEPMMFVIEENSEVESEEIRQDDESLPFQGSSMATTITEESKKNIWDYFTKIPGEKLMATCNQCYKTLSYKTSITNLKTHLSFKHIELYNSLIGNSTEHQYQLMQSDEPIMFMIEENSEVESEEIRREDAFDLQFQESPVVSRVNKENTIRSNNMIWFYFSKVPNKWKIATCNKCSKNLSYRTSITNLKTHLKQQHQKIFNDYIAVKSKYDSYLAHLVQDQSQSEYTSPFEFISANQDSSEDVFLPPRECSEAVALVSEQEDNSLWDYFTRNPEEDKTATCKLCSRHLSYRTSITNLKIHLKWKHLAQYYSVMKEKRKKQRTKWSFKREHPNGVAPSVLQFKEFCQSQEPLGIAKVRINDNARNIAEAISILEWNHFNSIYHNLNEILRYSLGLFEDILKKVKSIVNYYDLNSNAKERLLEHQRLLNNSTQPLMLITSEGKRWNSTYLMIKRFLHLQDSVVETMPNLDNDLPVITNEEWTTLRQLSLLLEPFNEAIKELSAEKYVLASKAFAIVNGLKDVLELLKKNPENYDAINSGFESIVSQLNTQFHDLECHDDLAMCTLLDPRYKMSMFVDERAAERAKLNLVSEVKKLINEEIDQTKSSDETSIKSDPNHMDTSEISLWRKLNLALKERSTSNLDALAMSQQEVESYMQDEFAQSNDEPCEWWRSGRHKYPHLAKLFKNKCNIVANSVPVESLFSKTSCMESDKKLKLSVRKTEQLVFLTANLKNCDIRRLMNWQAIRKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-