Basic Information

Gene Symbol
CDC5L
Assembly
GCA_907165275.1
Location
OU015657.1:9889654-9904961[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-17 8.9e-14 51.9 1.8 2 46 9 54 8 54 0.97
2 2 2.8e-13 3.9e-10 40.2 0.1 1 46 60 104 60 104 0.95

Sequence Information

Coding Sequence
ATGCCGCGAATTATGATAAAAGGAGGTGTTTGGCGGAACACGGAGGATGAAATCCTCAAAGCGGCTGTGATGAAATATGGCAAAAATCAGTGGTCTCGAATAGCTTCACTGCTACACAGAAAGTCTGCGAAACAATGCAAGGCCCGATGGTATGAATGGCTGGACCCCAGTATCAAGAAGACAGAATGGTCGAAGGAGGAGGACGAGAAGCTGCTACATCTGGCAAAGATGATGCCAACACAATGGAGAACTATTGCGCCTATTATAGGAAGGACAGCATCCCAGTGCCTTGAGAGATATGAAAATTTATTGGATCAAGCACAAAAGAAAGAAGAAGGTGAAGAGACTGGTGATGACCCCCGCAAACTCAAACCGGGTGAAATTGATCCAAACCCAGAAACAAAACCTGCAAGGCCGGACCCCAAAGACATGGATGAGGATGAACTCGAAATGCTATCGGAAGCGCGAGCTCGGTTGGCCAACACTCAAGGCAAGAAGGCGAAGAGGAAAGCCCGCGAAAAGCAATTGGAAGAAGCGCGGCGCCTCGCCGCTTTGCAGAAACGGAGGGAGCTCAGCGCGGCCGGCATCGCTGTGCCCATCAGACGCAAGAAGAAGCGCGGCGTCGACTACAACAGCGAGATACCGTTCGAGAAGCGGCCCGCGCCCGGCTTCTACGACACCTCCACGGAAGCGGTGGACGAGATGGCGCCCAACTTCTCGCGGTTGCGCCAGCAACAGCTGGACGGGGAGCTGCACTCCGAGAAGGAAGAGAGGGAGCGCCGCAAAGACAAGCAGAAGCTGAAGCAGCGCAAGGAGAGCGACGTGCCGCAAGCGATGCTGCAGGGCGAGCAGCCGGCGCGCAAGCGCAGCAAGCTGGTGCTGCCCGAGCCGCAGGTGTCCGACCAGGAGCTGCAGCAGGTGGTGAAGCTGGGCCGCGCGTCGGAGGCGGCGCGCGAGTCGGCGGGCGGCGGCGAGGGCGGCGCCACGGACGCGCTGCTCGCCGACTACGCGCTCACCCCCGCGCCCGCCGCCGCGCTGCGCACACCCGCGCAGCCGCACGACAGGATTCTGATGGAGGCGCAGAACGTGATGGCGCTGACGCACGTGGACACGCCGCTGAAGGGCGGGCTGAACACGCCGCTGCAGCAGGCGGAGCCCGGCGCGGGCGCGGCCGCGGCCGCGGGCCTGACGCTGGGGCCGGCGCAGGCGCGCGCTCTCGCCACGCCCAACACTGTGCTGGCCACACCCTTCAGGTCCACGCGCACCGAGGTGTCCACCCCGGGCAGCTTCAACACGCCCAGCCTCACGCCCGCGCTGCCCGGGCTCACGACGCCTGGTCTGCGGGACAAGCTGAGCATCAACCCCGAGGACCAGATGGGCGCGGGCGACACGCCGCAACAGGCCAATCAGCTGCAGAAACAGCTGAAGGCGTCGGTGCGCAGCGCGCTGCAGGCGCTGCCGGCGCCGCGCAACGACTACGAGATCGTGGTGCCCGAGCGGGAGCGGGAGGAGGCGCCCGCCGCGCCGCCCGCCGCCGGGGACGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGCGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGCGGGGCGGGGCGGGGCGCGGGGACGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGCGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGTGCGGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGGCGGGGCGGGGCGCGGGGAGGAGGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGACCAGGCCGACGCGGACGAGCGCGCGCTGCGCCTGCAGCGGGAGGAGCGTGAGTACGGGGCGGGGGCGGGGCGGGGCGGGGCGCGGGGAGGAGGACTGAGATCAGAGAACCAGTTGTTTACTCCCCAAGTTCAGCGCGAGCGGGCGCTGTCGCTGCGCTCGCAGGTGGTGCAGCGCGGGCTGCCGCGGCCGGTGGAGGTGAACGCGGGCATCCTGCGCGGGCGCGGCGGCGCGCCGCTCACCGAGCTGCAGCAGGCCGAGGAGCTCATCAAGCAGGAGATGCTCACTATGATGCACTACGACGCGCTGCACAACCCGCCGCCCGGTGTGGACAAGAAGCGCGCGGTGCAGCAGCAGGCGGCGCACCTGGCGTACCTGGAGCAGCACCCGTACGAGCACTGCAGCGCCGAGGAGATGGCGTACGCGAGGGGCTTGCTGCAGAAGGAGATGGAGGTGGTCAAGGCGGGCATGGGCCACGGCGACCTCAGCCTCGAGTCCTTCACGCAAGTGTGGGAGGAGTGCCTCGCGCAGGTGCTCTACTTGCCCGGCCAGAACAGATACACGCGGGCCAACCTCGCCAGCAAAAAGGACCGCATCGAGTCGCTCGAGAAACAATTGGAGCAAAATAGAAATCACATGGCGAAAGAAGCTAAGAAATGCGCGAAAATGGAGAAGAAAATTAGAATTCTAACAGGCGGATATCAAAGTCGAGCCGCAGCTCTAACAAAACAGATCAACGAGGGCCAAGATGAAATTGAACAACTGAGGCTCCAAATTAACACTTTCAAGTTCCTAGAAGAACAAGAAAAAGCTGCGATCCCACGCAGGATACAGTCGTTGACGGACGACGTGAATCGTCAGTTGGAACGCGAGAAGACCTTACAGAAGCGGTACGCTGAGTTGCAGGCGAAATTGGAAGACCTACAAAAAGGAAAAAAACTGCCGACGGAAGCCGCTGCAATGGAGAGCGATCAAGTTTGA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSKEEDEKLLHLAKMMPTQWRTIAPIIGRTASQCLERYENLLDQAQKKEEGEETGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPIRRKKKRGVDYNSEIPFEKRPAPGFYDTSTEAVDEMAPNFSRLRQQQLDGELHSEKEERERRKDKQKLKQRKESDVPQAMLQGEQPARKRSKLVLPEPQVSDQELQQVVKLGRASEAARESAGGGEGGATDALLADYALTPAPAAALRTPAQPHDRILMEAQNVMALTHVDTPLKGGLNTPLQQAEPGAGAAAAAGLTLGPAQARALATPNTVLATPFRSTRTEVSTPGSFNTPSLTPALPGLTTPGLRDKLSINPEDQMGAGDTPQQANQLQKQLKASVRSALQALPAPRNDYEIVVPEREREEAPAAPPAAGDEDQADADERALRLQREEREYGAGAGRGGAGRGEEDQADADERALRLQREEREYGAGRGGAGRGGAGRGEEDQADADERALRLQREEREYGAGAGAGRGAGRRTRPTRTSARCACSGRSVSTGRGRGGAGRGAGTRTRPTRTSARCACSGRSVSTGRGRGGAGRGAGRRTRPTRTSARCACSGRSADADERALRLQREEREYGAGAGAGRGAGRRTRPTRTSARCACSGRSVSTGRGRGGAGRGGAGRGEEDQADADERALRLQREEREYGAGAGAGRGAGRRTRPTRTSARCACSGRSDQADADERALRLQREEREYGAGAGAGRGAGRRTRPTRTSARCACSGRSDQADADERALRLQREEREYGAGAGRGGARGGGLRSENQLFTPQVQRERALSLRSQVVQRGLPRPVEVNAGILRGRGGAPLTELQQAEELIKQEMLTMMHYDALHNPPPGVDKKRAVQQQAAHLAYLEQHPYEHCSAEEMAYARGLLQKEMEVVKAGMGHGDLSLESFTQVWEECLAQVLYLPGQNRYTRANLASKKDRIESLEKQLEQNRNHMAKEAKKCAKMEKKIRILTGGYQSRAAALTKQINEGQDEIEQLRLQINTFKFLEEQEKAAIPRRIQSLTDDVNRQLEREKTLQKRYAELQAKLEDLQKGKKLPTEAAAMESDQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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