Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_907165275.1
Location
OU015673.1:2226654-2232891[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-13 1e-10 41.7 0.0 1 38 94 132 94 137 0.94
2 2 1.6e-18 9.6e-16 57.8 0.0 1 43 308 351 308 353 0.95

Sequence Information

Coding Sequence
ATGGTGGTAGGGCGCTCTCTAGTGCCCGGCTGGCTAGTTACCACCTTTAAGTTGCAAATCTGTCGCCAAGCACCTGACGGTGTATTACCAGAAACAGTGGATAAGGTGCAAGCGCCGAGCTCGTCCCCGAGCCTCACGGAGCAGCCGCTCGATCTCAGCGCCAAGAGTACATCCAGCACCAGTGGCACACCGCCCCCGGATGTCAGGGTCCTAGACAACGCTAGATTGAGCCGGGTAGCGCTCGAGGGCGCGAGCAACAGCGCCCCGCGGCGCGCGTACACAGACGACGAGCTGCGGTCGGCGCTGCGCGACATCCAGTCGGGGCGGCTGGGCACGCGCCGCGCCGCCGCCGTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTCAACAAGTTCGGGCTCGGCGCCGACCATGCGCCCGACTCCGAGCCGGACAGCGAGCCCGAGAGGGCCGACTCGCCGCCCTCCGTCATACTCAAAATACCCACGTTCCCCCCGCCCGACGACAAGAGCTCGTCCCCCGCCACGCCGGCCACCACCCCCGTCACCCCGGTGACGCCCCTCACCCCGCACCTGCCACCGCCGCACCCGCCTCTCGGCCAGCCCTCCCAGCTGCTCTTACCGCCGTCGGTCTTCGCCGACCCGCCGTCCTCCCAACATCTCTTCACCTCGATAAGCGACGTGATAGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCCCTCGACAGGCCGCAGCATGCGGCCGAGATGCAGCAGTACATGCGGACGCCCGACCGGCACGTGTCGGTGATCAAGACGCCGCCCGATCAGAGGAACTACCCGCTGCCGTGCAACTCCAAAGCGCCGCCCAACAACAACGGCCAGCCCGCGGCGGGCGGCAAGGGCACGCGGCCCAAACGGGGCAAGTACAGGAACTACGACAGGGACAGCCTGGTGGAGGCCGTCAAGGCGGTCCAGAGAGGCGAGATGTCGGTGCACAGGGCCGGCTCCTACTACGGCGTGCCGCATTCGACGCTCGAGTACAAAGTGAAGGAGCGCCACCTGATGCGACCGAGGAAGCGAGAGCCCAAGCCGCCGCAGGACGTGAAACCGCAGCCGCCCAAGCCACAGCCCCCGAAGATGCCGAGCAAGCCGTTCTCGAACGGGCTGAACGGCCCCGAGCCCGCGGGCTACCCGCCGAGCTACCCGTTCTGGCCGGGCACCGGGTTCGCCCCGCCGCCGGCGCCCGACCTGTACGCGTCGCACATGATGCGGCGGCTGCGCGAGGAGGCGCCGCCGCCGGCGAACGGCTCCTTCCTCGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCGGGCGCCGCGCTGCTGCAGCGGCTGACGGCGGAGCCGCGGCCGGGCGCGGCGGGCGAGGCGCCGTGCCTGCTGCGGCGGCTGGCGGGCGACGCGGGCGCCGAGGACGCGCCGCCCGCGCGCCGCGCGCGCCGCGACAGCTCCGACCAGCAGCTGGCGGCCGGCATGCGCGAGGCGGTGCAGCGGCTGCGCGCGGACAAGGCGCGCCCGCGCAGCGGCTCCGGCACCCCGCCGCCCGCGTCGCCGCCGCCCGCGCCCCCGCTCGCGCCCCCCGACCGCGCCTAG
Protein Sequence
MVVGRSLVPGWLVTTFKLQICRQAPDGVLPETVDKVQAPSSSPSLTEQPLDLSAKSTSSTSGTPPPDVRVLDNARLSRVALEGASNSAPRRAYTDDELRSALRDIQSGRLGTRRAAAVYGIPRSTLRNKVNKFGLGADHAPDSEPDSEPERADSPPSVILKIPTFPPPDDKSSSPATPATTPVTPVTPLTPHLPPPHPPLGQPSQLLLPPSVFADPPSSQHLFTSISDVIAKSISQKFQQPLDRPQHAAEMQQYMRTPDRHVSVIKTPPDQRNYPLPCNSKAPPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPQPPKMPSKPFSNGLNGPEPAGYPPSYPFWPGTGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPGAAGEAPCLLRRLAGDAGAEDAPPARRARRDSSDQQLAAGMREAVQRLRADKARPRSGSGTPPPASPPPAPPLAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-