Zfil015072.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015658.1:12422900-12428942[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 8.3e-09 35.6 0.0 4 39 178 214 175 218 0.90 2 4 1.2e-10 7.1e-08 32.6 0.3 4 39 232 267 229 270 0.91 3 4 6.2e-14 3.7e-11 43.1 0.0 2 45 285 329 284 329 0.96 4 4 1.1e-17 6.8e-15 55.1 0.0 1 43 336 379 336 380 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCGACGCCGCGGCGCTGGTGAAATGCGAGCCGCTGTCAGACGACGAGAGCAACTCGCAGTTCGCACACAGCTTCATTTGCAAGCAGCTTTCGTTATTAGACCACCCCGTGAAAGTAGAGTTTGAACACAATGGAGATGAGAGAACGCCAGCCCATATCCTGCACAACCTACACGTGACGGATGGCCTGGAGGAGCTGTCACCGCTGGCGCCGGCGGGCCCCGCCGCCACGCCCGTCTGCGTGAAGCAGGAGCCGGCGGACGCGCCGCCCGCCGTCACCCTGGAGACCTTGGAGTCTGCCTCACACACCGGCATCATGTGCTCATCATTTTTAGACAGGCATATATCGCTACATGGTTGTAATGATGTCGCCGACTCCTCGGATTTCATGCCACTCTTGGCTGTCAAAGACGAACCACTATCTGAAGGGGAGCAGCAACACCTAAGCGGCGAGGATACCAGTGACTCGTGCAGTACGCAGCCGGAGCCAGCCACCAGAGGTAGTCCGAAGAGTTGGAGCCAGCAGGATATGGATAAAGCCCTCGAAGCTCTGAGGAAGCATAACATGAGTCTTACGAAGGCATCAGCTAAGTTCGGCATTCCGTCCACGACACTATGGCAGCGCGCGCACCGGCTCGGCATTGACACGCCGAAGAAGGAGGGCGCCAACAAGTCCTGGAGCCAGGCGGACCTGCACGGAGCCCTGCACGCCCTGAGAGCGGGCGCCATATCTGCTAATAAGGCCAGCAAAGCTTATGGCATCCCGAGCAGTACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGACGCGCCGACCTGGAGCGCGCGCTCGCCGCCATCCGCTGCGGCGCCAGCTCCGTGCAGCGCGCCGCCGCCACCTTCGGGATACCCACCGGCACTCTATATGGGCGATGCAAAAGAGAAGGCATCGAGTTGTCTCGCTCCAACCCAACGCCGTGGTCCGAGGATGCGATGGGTGAAGCTTTAGAAGCTGTTCGGATTGGTCAAATGTCCATAAACCAAGCTGCCATCCACTACAACTTGCCTTACTCCTCGCTGTACGGGCGTTTTAAGCGGTGCAAATATCAGACCCAGGTGCCTCAAGAAATCAATCAGCAGAACATTCAAGAGAGCTACGAAACAGATCAGCAAAACCAAACCCCGAGCCACGAGCTGCCGTACTACCAGCACCAGCACACGACCCACACCATCCACCACCTGCCCGACCCCACGCGCCATCTGCCTGACACACTACAGCATCCATACTCGATGAGTGATCACGTCCATGACACCACCATTACAAACGCGATGCACGAACAGTACAATAGTCAACTGATGTATTACCAAGGTTGCAGTGGCAGCATCGCCAGTTGA
- Protein Sequence
- MPGDAAALVKCEPLSDDESNSQFAHSFICKQLSLLDHPVKVEFEHNGDERTPAHILHNLHVTDGLEELSPLAPAGPAATPVCVKQEPADAPPAVTLETLESASHTGIMCSSFLDRHISLHGCNDVADSSDFMPLLAVKDEPLSEGEQQHLSGEDTSDSCSTQPEPATRGSPKSWSQQDMDKALEALRKHNMSLTKASAKFGIPSTTLWQRAHRLGIDTPKKEGANKSWSQADLHGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRCGASSVQRAAATFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQVPQEINQQNIQESYETDQQNQTPSHELPYYQHQHTTHTIHHLPDPTRHLPDTLQHPYSMSDHVHDTTITNAMHEQYNSQLMYYQGCSGSIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -