Basic Information

Gene Symbol
Onecut3
Assembly
GCA_907165275.1
Location
OU015674.1:1042865-1050698[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-38 2.7e-34 117.6 0.3 2 78 159 235 158 236 0.97

Sequence Information

Coding Sequence
ATGGAAGAAATCCGAGCGAGAGACCGCGTGCCACTCACCGTGATAGTCGCCCCCACCAACGCGTCGCCCCCCAGGCTGTCCCCGGCGGACTTGTTACCGGACGCCGACGCCGCGTTCCACCCCCTCTCCGCTGTGAACGGCCGACTCACCCCGCCGGGGCTAGAGCCAGCTTCGTACGCGACCCTCACGCCGCTGCTGCCTCTGCCGCCCATCAGCACGGTATCAGACAAGTTCGCTTACCACTCGGGCGGCACCTTCACTGTTATACAACAGCAGCAGAGTTACGCGTCTCTATCACCTGCGCCTTACAATGAGCCTTTGTCCCCTCAATCCGCGTACAGCAGGAGGAGCGTGTCACCGAACTCGTTCGAGAGACAGTCGCCCACACCGCCGCTGCCCAGTCCGGGGCTCGATCTCAACGCGGCGTTGCTGGCGAAGGAGGAGCAGCAAGGGCAGCAGCAGTCGCAGAACGACACGGAGGAGATAAATACAAAGGAACTGGCGCAAAGGATAAGCGGGGAGCTGAAGCGGTACTCGATACCGCAAGCGATATTCGCGCAGCGGGTCCTGTGCAGGTCGCAGGGGACGCTCAGCGATCTGCTGAGGAATCCGAAGCCGTGGTCCAAACTGAAGTCGGGCAGGGAAACGTTCAGGCGGATGTGGAAATGGCTCCAAGAGCCAGAGTTCCAGAGGATGTCGGCGTTGAGGCTAGCAGATGCACCAAATCAGCAGCAAAGTAAACAAGGCGACAATGTAAACAACATGCCCCAGCAGAATTACTGCCAGCCCATGGATTACCAGAGCCTGCAAAGTGCTCCACCAGTGCCCCAGGGCCCCACTATGTACTCTCCAGGGCCTCAGCCCCATTGGGACACAATGGCATACGAACCTGCCGGAGATATTTCTTGCTTGTGA
Protein Sequence
MEEIRARDRVPLTVIVAPTNASPPRLSPADLLPDADAAFHPLSAVNGRLTPPGLEPASYATLTPLLPLPPISTVSDKFAYHSGGTFTVIQQQQSYASLSPAPYNEPLSPQSAYSRRSVSPNSFERQSPTPPLPSPGLDLNAALLAKEEQQGQQQSQNDTEEINTKELAQRISGELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLADAPNQQQSKQGDNVNNMPQQNYCQPMDYQSLQSAPPVPQGPTMYSPGPQPHWDTMAYEPAGDISCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00144359;
90% Identity
-
80% Identity
-