Basic Information

Gene Symbol
-
Assembly
GCA_907165275.1
Location
OU015673.1:8488846-8490498[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.0026 9.9 7.2 0.0 49 86 110 146 88 147 0.75
2 5 0.0045 17 6.4 0.1 47 86 203 240 170 241 0.75
3 5 0.0051 19 6.3 0.0 49 83 295 328 278 330 0.81
4 5 0.47 1.8e+03 -0.0 0.0 2 29 374 400 373 402 0.78
5 5 0.0053 20 6.2 0.0 51 84 399 431 394 434 0.82

Sequence Information

Coding Sequence
ATGGATTTAAATAATACACCGAACCAAAGTTACTGGTTTGTTCTTCGGGAGGATCAAAACAATATGACCCTAAGTAGTAATAACTTTACCTTAGAAAACACTCAAATTGAAAATGAAGTGAGATACGTAGTGGATGCAAGTGACAACAGGTATATCCGAATAAATGAAGCCCCTATACCTGTTACACTACTAGAAAATAGTGATAATTTGGGAAAAACTTTAGTAAAGCCCACCAAGGAGGGAGATAATTTTTGGGACAGAAATAAAATAAAATTATTTCTCACACTGTGCTTAGAAAATGGCATTAGGAGTCCCAATGCAACAAATGCTAAAGAGAAATCTCTCTGGGATAATATTGCAAATATGACAGGAACCACTACGGAGGATTGCAACAAAAAGTATAGAAATCTAAGGCGCACTTATCTAAGGTTACTGAAGAAGAAAATGCTAGGTAAAGAAATTAAATGGGTTCACTACAACTTATGTGAGAATGTATTTAAGGACTATAAGCCTCTGTCATGTTCAGCTCTTGAGCCATGGGAGGATAACAAAGTAAACAAGCTCCTGAGTCTGTATATAGAAAATTTAAGTAGGTTTCGCAGTTCAGAATATTTACAGAAGGATGTGTGGAAAGATATAGCCTTGCAGCTGGGCACTACTGAGTATAGCTGTTATCACAAATTTAAAAATTTAAAAAGAACTTATTTCAATTGGCTGGAGAGAAATCGTGACAGTGGGAAATTGATCAAATGGCAATACCATCAGTATTTTGAAAGAATATTTTACAATCATGATCTGAATACAGGCCCTTGGGATAGAAATAAAGTCAAAGTATTACTAGAGACATATAGTCAAATAGCACATAAGTTCAGAAATCCTAAATTTCAGAAAAAACAACTCTGGAGGGAAATTGCAACTTCAGTGGGAGAGAGTCCTGACATGTGTGATAAGAAGTTTAGGAATTTGAAGCAGACTTATATAAGACTCAAGAGCAAGGTAGACAACTCTGGCAGGACAGTCACCAAATGGAGATATTACAAACACTTTGAACAAATCTACAGCACTCAAGCCAGTTATAACAGAGTTGATGATGACCATGACATTACCTACCGATGTTATGAGGAAAACTATGTAAAACAGTTGTTGGAGTTCTATTTGAAGCATAAGGAGAAGTTTAGGGACCCTCTGACCAAGAAGAAAACACTGTGGAGGATGATCGGGCCCAAACTGGGGTTGTCATCAGAAGAGTGCAATAGGAAATTCCGAAACTTAAAGCAAACTTATATAAGAATAGCAGAAAAGAAGAAAGAAACTGGAAAATGTAATAAATGGCCATACTATACTTACTTTGAACAAATCTACGCTGAACCAGCGAGTAGGGGCAACCATAGAAGTAGTACTGACAGTATTCCTGTGTCGGAATTAAAAAAGATTGTTCAGGACACCATTCAAGAGAGAAAAGAGAATGACAAAAAATTTGATACGCTGATCAGAGTGGTGCAGGAGTCAAATGACATCCAGAGAGAAAGGAACAGAATATTAAAGGCGTTACTTGAAAGGAACTGA
Protein Sequence
MDLNNTPNQSYWFVLREDQNNMTLSSNNFTLENTQIENEVRYVVDASDNRYIRINEAPIPVTLLENSDNLGKTLVKPTKEGDNFWDRNKIKLFLTLCLENGIRSPNATNAKEKSLWDNIANMTGTTTEDCNKKYRNLRRTYLRLLKKKMLGKEIKWVHYNLCENVFKDYKPLSCSALEPWEDNKVNKLLSLYIENLSRFRSSEYLQKDVWKDIALQLGTTEYSCYHKFKNLKRTYFNWLERNRDSGKLIKWQYHQYFERIFYNHDLNTGPWDRNKVKVLLETYSQIAHKFRNPKFQKKQLWREIATSVGESPDMCDKKFRNLKQTYIRLKSKVDNSGRTVTKWRYYKHFEQIYSTQASYNRVDDDHDITYRCYEENYVKQLLEFYLKHKEKFRDPLTKKKTLWRMIGPKLGLSSEECNRKFRNLKQTYIRIAEKKKETGKCNKWPYYTYFEQIYAEPASRGNHRSSTDSIPVSELKKIVQDTIQERKENDKKFDTLIRVVQESNDIQRERNRILKALLERN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-