Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_907165275.1
Location
OU015652.1:2380601-2382436[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.8 7.2e+03 -2.4 0.0 16 25 30 39 28 40 0.73
2 3 9e-15 8.3e-12 45.5 12.6 2 63 44 105 44 107 0.94
3 3 0.00042 0.39 11.3 2.1 28 54 84 110 83 115 0.89

Sequence Information

Coding Sequence
ATGAGCTCTCCAATTATCATCACGGTACCTAAAAATTACCTAACGGTGGACACCGGTGAGTCGCAGGTGGTCTTGGAAGCCCTGTCACCAGCCCCGTCCAGGAAACGGAGGCTCGACCACTTATCATGGGAGGAAAAGATGCAAAGGAAGAAGATGAAGAATCGCGTGGCGGCGCAGACCTCGCGGGACAGGAAGAAGGCGAAAATGGATGAGATGGAGAGTAATATGAAAAGAATTATGGGTATGAACGAGAGACTGATGGAGGAGGTTTCGAATTTGAAGGCGTTGAACGAGCGTTTGTTGAGTGAGAACGCAGCGTTGCGCGGCGAGGCGGCGGCGCGGAGTGTCGCGGGGGCCCGAGGACCGGCAGAGTCTGTTCCTCAGCAGAAGGACGGGCCCCCGGCGGGACTCCGCGCGCTGCGCTCGCTGCTCGCGCTGATTCTCCTATCTCAGACATCCTCGCCCACATCAACTCTGATGAATACCTCGATACCCTCAATGAGCTCGCTGACTCCATCCTCAAAGAAATTAATTCAAGTTCTACAGGAACGCCTGAAGATGTCCCAATCCACAACACTGGAGAGTGCAATAAAAGAGTTGAAATGGTGGGGACCACAACAAAGCAATTGGAATCCAGTGAAAGTTTAG
Protein Sequence
MSSPIIITVPKNYLTVDTGESQVVLEALSPAPSRKRRLDHLSWEEKMQRKKMKNRVAAQTSRDRKKAKMDEMESNMKRIMGMNERLMEEVSNLKALNERLLSENAALRGEAAARSVAGARGPAESVPQQKDGPPAGLRALRSLLALILLSQTSSPTSTLMNTSIPSMSSLTPSSKKLIQVLQERLKMSQSTTLESAIKELKWWGPQQSNWNPVKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-