Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000009.1:8631322-8633825[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.083 5 8.9 2.4 1 23 81 103 81 103 0.98

2 16 0.056 3.3 9.5 2.6 1 23 112 134 112 134 0.99

3 16 0.36 22 6.9 2.3 1 23 143 165 143 165 0.98

4 16 0.51 30 6.5 2.3 1 23 175 197 175 197 0.98

5 16 0.66 40 6.1 4.0 1 23 205 227 205 227 0.98

6 16 1.1 67 5.4 1.7 1 23 236 258 236 258 0.97

7 16 0.52 31 6.4 2.3 1 23 299 321 299 321 0.98

8 16 0.34 21 7.0 0.1 1 23 327 349 327 349 0.94

9 16 0.094 5.7 8.8 1.1 1 23 358 380 358 380 0.98

10 16 0.0011 0.065 14.9 2.6 1 23 389 411 389 411 0.97

11 16 0.18 11 7.9 1.6 1 23 451 473 451 473 0.98

12 16 1.1 66 5.4 1.0 1 23 482 504 482 504 0.96

13 16 7.9 4.8e+02 2.7 0.9 1 23 542 564 542 564 0.87

14 16 0.018 1.1 11.0 1.1 1 23 570 593 570 593 0.97

15 16 0.0023 0.14 13.8 1.2 1 23 601 623 601 623 0.99

16 16 0.13 8 8.3 1.4 1 23 632 655 632 655 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.083	5	8.9	2.4	1	23	81	103	81	103	0.98
2	16	0.056	3.3	9.5	2.6	1	23	112	134	112	134	0.99
3	16	0.36	22	6.9	2.3	1	23	143	165	143	165	0.98
4	16	0.51	30	6.5	2.3	1	23	175	197	175	197	0.98
5	16	0.66	40	6.1	4.0	1	23	205	227	205	227	0.98
6	16	1.1	67	5.4	1.7	1	23	236	258	236	258	0.97
7	16	0.52	31	6.4	2.3	1	23	299	321	299	321	0.98
8	16	0.34	21	7.0	0.1	1	23	327	349	327	349	0.94
9	16	0.094	5.7	8.8	1.1	1	23	358	380	358	380	0.98
10	16	0.0011	0.065	14.9	2.6	1	23	389	411	389	411	0.97
11	16	0.18	11	7.9	1.6	1	23	451	473	451	473	0.98
12	16	1.1	66	5.4	1.0	1	23	482	504	482	504	0.96
13	16	7.9	4.8e+02	2.7	0.9	1	23	542	564	542	564	0.87
14	16	0.018	1.1	11.0	1.1	1	23	570	593	570	593	0.97
15	16	0.0023	0.14	13.8	1.2	1	23	601	623	601	623	0.99
16	16	0.13	8	8.3	1.4	1	23	632	655	632	655	0.98

Sequence Information

Coding Sequence: ATGAGTAAAGAAAATGTAGAAAATTTCGATTACAATAATGTTTTTGTGAAGACGGAGCAAACGAGCGATGTGGAGATCGAGTGCGAGGAGGAACACCCGGAGTATGACATCGTCAAGGTGGAAATCAAGAATGAAACGGAGGAATACAGTAGTATTCACTACGAAAGGTACTCTCCGCCCCCCGCCCCGCCCTCCCCCTTGCCTGTCGTGAAGCCCGAGCCGCCGGACCCCTCCAAGACCTTCACCTGCTCCGAGTGCTCCTTCCGTACCAAGTGGAAGAACAGTCTTCGGGGCCACATGAAGACCCACAGCGCCGCCGAGTTCGTCAAGCTGTACAAGTGCAAGCAGTGCTCCTACAAGACCAAGTGGAAGAACTACCTCGCTAAGCACGTGCGCATCCACAGCACTCCCGAGCTGCTCGACATGTACAAGTGCACCGAATGCAGCTTCCAGACCAAATGGAAGACGAGTCTGAAGATGCACCAGTCCATCCACTCGGTGAAGGACACCAATCTCAAAATCTACAAGTGCGGCAAGTGCACGTTCGAGAGCAACTGGAAGCAGTACCTCAATCGGCACCTCAAGAGTCACCTGCCCGAGAGTTTACAGAAGCACAAGTGCTCCGAGTGCAGCTTCCAGACCAAGTGGAAGCAGTACTTGAAGGAGCACATGAAGATTCATTCGGCGCCGCACACGGTGAAGACGTACACGTGTGCGGAGTGCCAGTTCGTGACGCGGTGGAAGCAGTACTTCAAGGAGCACGTGAAGAGGCACAGCAGTCCGAAGAAGGTGAGGGTGTGGAAGTGTTCGGCGTGCATCTTCGAGGCGGAGAGCAAGTACGTCCTGAAGAATCATCTGAAGAAGTGCCACGACATCACGGATAAGGTGGAGTACTACCAGTGTTCGGAGTGCGTGTTCAAGACCAAGTGGAAGCAGTACTTGAAGCGACACGTCAAGCTGCACGACTCGGATGCTTGCTACAAGTGTCCCGAGTGTCCATTCGAGACCAAGTGGAAGAATAGCTTGATCGGGCATCGAGCGGTCCACGGAGAGTCCAAAATCGTACCTTTGTACCAGTGCAATATCTGCACGTTCAAGACGAAGTGGAAGAATAGCTTGAACGGGCACATGTCAATACACAACCCGCCGGAGAACGTGAAGATGCACAAGTGTCCCGAGTGTCCCTTCGAGAGCCGGAGCAAGACCTATCTCAAGCGTCACGTCAAACTCCACAGCGGCGGCGACGACCTCGAGACCTACACCTGCCAGCAATGTCAATTCCAAACCAAGTGGAAGCAGTACTTCAAAGAACACGTCAAAAAGCACGACTCGCCCGATTTGATCCCGATTTACAAGTGCCCGGAGTGCGAGTTCGTCACCAAGTGGCGCCAGTACTTCAAAGAGCACGTCAAGAAGCACCAATCCCCGGAACTACTCAAGCAGTACTCGTGCGACGACTGCGAATTCACCACGACTTGGCGCCAGAGCTACCGCGAGCACGTCAAGCTCCACAGCAGCCCCGACAAAGTCTTCCGCTGCAAGAGCTGCAAGTTCAAAACGAAATGGAAGCAGTATTTTCGCGAACACGTCAAGAAGCACACCAACCCCGACTCGGTCAAAGTCTACAGGTGTACGATTTGTTCGTTCATCACGATATGGCGGCAGTATTTTAAAGAGCACGTGGAGCGGCATAACTCCACGCAGATTTACAAGTGTGCCAAATGCGAGTTCGAGGGCGAGTCGAGGTACTTCTTGACCAAACACATGCGCGAGATGCACTGCCAGGAGGAGGCGCAGACGTACAAGTGCGGCAAGTGCGGATTCACCACCAAGTGGAGAGAGAGTCTCAAGTCGCACCTGAGGGTCCACTCGAATTCGAAGAACGTGCGGATCTACAAGTGTTCAGTGTGTCTGTTCGACACCAAGTGGAAGAGCAGCTTCAACTCGCACATGAGGATGGTGCACAGCAAGCCCGAGGTGGTCAAGAGGTACAACACGAGGCAGAACAAGGAGGACGTAGATGCTCAAGAAGAGATTATATGA
Protein Sequence: MSKENVENFDYNNVFVKTEQTSDVEIECEEEHPEYDIVKVEIKNETEEYSSIHYERYSPPPAPPSPLPVVKPEPPDPSKTFTCSECSFRTKWKNSLRGHMKTHSAAEFVKLYKCKQCSYKTKWKNYLAKHVRIHSTPELLDMYKCTECSFQTKWKTSLKMHQSIHSVKDTNLKIYKCGKCTFESNWKQYLNRHLKSHLPESLQKHKCSECSFQTKWKQYLKEHMKIHSAPHTVKTYTCAECQFVTRWKQYFKEHVKRHSSPKKVRVWKCSACIFEAESKYVLKNHLKKCHDITDKVEYYQCSECVFKTKWKQYLKRHVKLHDSDACYKCPECPFETKWKNSLIGHRAVHGESKIVPLYQCNICTFKTKWKNSLNGHMSIHNPPENVKMHKCPECPFESRSKTYLKRHVKLHSGGDDLETYTCQQCQFQTKWKQYFKEHVKKHDSPDLIPIYKCPECEFVTKWRQYFKEHVKKHQSPELLKQYSCDDCEFTTTWRQSYREHVKLHSSPDKVFRCKSCKFKTKWKQYFREHVKKHTNPDSVKVYRCTICSFITIWRQYFKEHVERHNSTQIYKCAKCEFEGESRYFLTKHMREMHCQEEAQTYKCGKCGFTTKWRESLKSHLRVHSNSKNVRIYKCSVCLFDTKWKSSFNSHMRMVHSKPEVVKRYNTRQNKEDVDAQEEII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -