Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000007.1:1316047-1317612[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 1.5e+02 4.3 1.1 1 22 49 70 49 70 0.93

2 14 0.18 11 7.8 3.8 2 23 113 134 112 135 0.94

3 14 0.084 5.1 8.9 3.9 1 23 144 167 144 167 0.97

4 14 0.011 0.68 11.7 0.7 2 23 177 199 176 199 0.93

5 14 0.02 1.2 10.9 0.5 1 20 208 227 208 228 0.96

6 14 0.0012 0.072 14.7 3.9 1 23 238 261 238 261 0.94

7 14 5.6e-05 0.0033 18.9 1.8 1 23 270 293 270 293 0.97

8 14 0.0034 0.2 13.3 1.7 1 23 302 324 302 324 0.97

9 14 7.7 4.6e+02 2.8 1.1 1 23 332 355 332 355 0.87

10 14 0.0073 0.44 12.3 2.7 1 23 364 387 364 387 0.93

11 14 0.0046 0.27 12.9 0.8 1 21 396 416 396 419 0.90

12 14 0.0019 0.12 14.1 1.4 2 23 429 451 428 451 0.91

13 14 0.045 2.7 9.8 1.8 1 23 460 483 460 483 0.92

14 14 0.017 1 11.1 1.1 3 23 494 515 492 515 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	1.5e+02	4.3	1.1	1	22	49	70	49	70	0.93
2	14	0.18	11	7.8	3.8	2	23	113	134	112	135	0.94
3	14	0.084	5.1	8.9	3.9	1	23	144	167	144	167	0.97
4	14	0.011	0.68	11.7	0.7	2	23	177	199	176	199	0.93
5	14	0.02	1.2	10.9	0.5	1	20	208	227	208	228	0.96
6	14	0.0012	0.072	14.7	3.9	1	23	238	261	238	261	0.94
7	14	5.6e-05	0.0033	18.9	1.8	1	23	270	293	270	293	0.97
8	14	0.0034	0.2	13.3	1.7	1	23	302	324	302	324	0.97
9	14	7.7	4.6e+02	2.8	1.1	1	23	332	355	332	355	0.87
10	14	0.0073	0.44	12.3	2.7	1	23	364	387	364	387	0.93
11	14	0.0046	0.27	12.9	0.8	1	21	396	416	396	419	0.90
12	14	0.0019	0.12	14.1	1.4	2	23	429	451	428	451	0.91
13	14	0.045	2.7	9.8	1.8	1	23	460	483	460	483	0.92
14	14	0.017	1	11.1	1.1	3	23	494	515	492	515	0.96

Sequence Information

Coding Sequence: ATGGTGAAAAAGGAGCCCCTCCCTTGCCCCCAGTGCCCCTACACGACCCTTTGGGACTTCGCCTTCTTGCACCACCTCAGAAACAACCACTTCATGCGCCCCCGAAACCGCCGACTTTTCACTTGTTGGAAAAACCCCCCAAGCTATGATTGTGACAATTGCAACTTCCGCACCACTTTTAAAGTATCGTCGGACCGCCACATGCGGACCTGCTTCACCTCGAGACTCCTGCAGCCCCCTCAGGAGCCCATCATTTGCAAAAAATGCAGCTTCCAAGCTATGTCGAAACTGGACTTGAGAATACACAAACGCAACTGCAACTTGGTGAAGTTGTTGAAGTGCGAGCAGTGCGAGTATATCACGAAGTACAGCTGCGCGTTGAAACAACACGTGATGTACCATCATACGCCTCCGGAGGAGATTCAGTGGTTTAAGTGTGACCACTGCGAGTTTACTACGAAATATAGATTAGACATCAAGCGCCACATTCTGTCGAAGCATACGTCTCCGGAGGATGTTAGTTGGGTATACTGCGAGCAGTGTCCGTTTCGTACTAAAAGCAAAGGCAGTTTGCGTAACCACGTTTTGTATAAACACACTCCGATGGAGAGTATCCAGTGGTACCAGTGCCCCCAGTGTCCCTACCGTGCCAAAATGCAGTGCGACTTGCAGAAACACGTGATCTGTAGGCATGAAGAGGACCCCGCTTTGTTTCAATGCACACAGTGCGACTACAAAACCAAACGAAAATCGCGTCTGAAGCAACACATTTTGTTCCGACACACGGACAGCGAAGACCTCCAGTGGTACACTTGCCCCCATTGCCCCTACAAAGTCAAGCGCCAAATCGACCTAAAGCAGCACATTTTGCGAAAACACACGAGCCTAGACGAGATCCAGTGGTTCTACTGTGACCAGTGTCCGTACAAAGCCAAGTCTTCAGCTAACCTTAAGAGTCACAAATTCACCCACGACTCGTCTAGTTGTAAGTGGTACGAATGCCAACAGTGCCCTTTCAAAACCCGCTGGAAGAAGCAGCTTAAGCCGCACGTTTTAAGTAAGCATGCGATGGAGGGGGAAGTCACGTGGTTCGAGTGTGGGCAGTGCGAGTATAGGGCGAAGCGAAGGGACCACCTGAGGCGGCACGTGACGTATAGACACTTGGCTCCGGATGAAGTGGAGTGGTTTCAATGTGGTCATTGTCCCTATAGGGCGAAAGTCAAAAGCGAACTCAATAAACACGTAGTAGGGAAACACGACGTTTTCGATGAAAGTCGGTGGTTGAAGTGCAAGGATTGTGATTATAAGGCGAAGACGAACGATAATATGAGGAGGCACGTGTTGTTTAGGCATACGGCGGCAGAGGACATTCGGTGGCATGAGTGTGAGCAGTGCGATTTTCGAGCCAAGACGAAGGTGGGGTTGAAAAAACACGTGTTGTTTAGGCATACGGCGGTGGAGGATATAGAGTGGTTCGGGTGTGAGGTGTGCGGGTATAAGACGAAGAGGAAGGAGAGGGTGAAGGAGCACATGAAGCAAAAGCACTACGATTTAACGGGAAAATAA
Protein Sequence: MVKKEPLPCPQCPYTTLWDFAFLHHLRNNHFMRPRNRRLFTCWKNPPSYDCDNCNFRTTFKVSSDRHMRTCFTSRLLQPPQEPIICKKCSFQAMSKLDLRIHKRNCNLVKLLKCEQCEYITKYSCALKQHVMYHHTPPEEIQWFKCDHCEFTTKYRLDIKRHILSKHTSPEDVSWVYCEQCPFRTKSKGSLRNHVLYKHTPMESIQWYQCPQCPYRAKMQCDLQKHVICRHEEDPALFQCTQCDYKTKRKSRLKQHILFRHTDSEDLQWYTCPHCPYKVKRQIDLKQHILRKHTSLDEIQWFYCDQCPYKAKSSANLKSHKFTHDSSSCKWYECQQCPFKTRWKKQLKPHVLSKHAMEGEVTWFECGQCEYRAKRRDHLRRHVTYRHLAPDEVEWFQCGHCPYRAKVKSELNKHVVGKHDVFDESRWLKCKDCDYKAKTNDNMRRHVLFRHTAAEDIRWHECEQCDFRAKTKVGLKKHVLFRHTAVEDIEWFGCEVCGYKTKRKERVKEHMKQKHYDLTGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -