Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000005.1:632134-634089[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.19 11 7.8 3.9 1 23 22 44 22 44 0.98

2 18 0.028 1.7 10.4 1.4 1 23 129 152 129 152 0.95

3 18 0.82 49 5.8 0.3 1 23 157 180 157 180 0.95

4 18 0.023 1.4 10.7 1.3 1 23 189 212 189 212 0.94

5 18 0.041 2.5 9.9 0.7 1 23 221 244 221 244 0.92

6 18 0.0014 0.082 14.5 2.9 1 23 253 275 253 276 0.95

7 18 0.0065 0.39 12.4 2.4 1 23 285 307 285 307 0.99

8 18 0.00053 0.032 15.8 0.8 1 23 312 335 312 335 0.95

9 18 0.12 7.4 8.4 1.3 1 23 351 374 351 374 0.96

10 18 0.021 1.2 10.8 1.9 1 23 383 406 383 406 0.97

11 18 0.4 24 6.8 3.0 1 23 416 439 416 439 0.97

12 18 0.0034 0.21 13.3 0.7 1 23 445 468 445 468 0.97

13 18 0.43 26 6.7 2.8 1 23 473 496 473 496 0.94

14 18 0.14 8.4 8.2 7.5 1 23 505 528 505 528 0.97

15 18 0.011 0.68 11.7 0.3 1 23 537 560 537 560 0.97

16 18 8.3 5e+02 2.6 6.5 1 23 567 589 567 590 0.95

17 18 0.023 1.4 10.7 1.5 1 23 596 619 596 619 0.98

18 18 0.061 3.7 9.4 6.7 1 23 628 650 628 650 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.19	11	7.8	3.9	1	23	22	44	22	44	0.98
2	18	0.028	1.7	10.4	1.4	1	23	129	152	129	152	0.95
3	18	0.82	49	5.8	0.3	1	23	157	180	157	180	0.95
4	18	0.023	1.4	10.7	1.3	1	23	189	212	189	212	0.94
5	18	0.041	2.5	9.9	0.7	1	23	221	244	221	244	0.92
6	18	0.0014	0.082	14.5	2.9	1	23	253	275	253	276	0.95
7	18	0.0065	0.39	12.4	2.4	1	23	285	307	285	307	0.99
8	18	0.00053	0.032	15.8	0.8	1	23	312	335	312	335	0.95
9	18	0.12	7.4	8.4	1.3	1	23	351	374	351	374	0.96
10	18	0.021	1.2	10.8	1.9	1	23	383	406	383	406	0.97
11	18	0.4	24	6.8	3.0	1	23	416	439	416	439	0.97
12	18	0.0034	0.21	13.3	0.7	1	23	445	468	445	468	0.97
13	18	0.43	26	6.7	2.8	1	23	473	496	473	496	0.94
14	18	0.14	8.4	8.2	7.5	1	23	505	528	505	528	0.97
15	18	0.011	0.68	11.7	0.3	1	23	537	560	537	560	0.97
16	18	8.3	5e+02	2.6	6.5	1	23	567	589	567	590	0.95
17	18	0.023	1.4	10.7	1.5	1	23	596	619	596	619	0.98
18	18	0.061	3.7	9.4	6.7	1	23	628	650	628	650	0.99

Sequence Information

Coding Sequence: ATGTCGATTTTGGAGTACTGCAAAGCTTTCACGATCGGTGGAAAATCCTCATGGAGAAACGTGCACACCTGTAACCTGTGTCCGTATTTTACAACATCGTTTTTTCTTATGACGAACCACGTGCGACGACACCGTTCATCGTTGGAAAAATTTACGTGCTCGGACGCCAAAATTGAATTGTATTATTGTAAAGATTGCGACTTTAAGACAGAACTGACGATTGTGTTCAAACAACACTTTAACACCCATCACGGAATTAAAAGTGAACGTGGAGAAAATTCCTGCATCCAAAACTACGTTTGCGAAAAATGCGCCTTCGAAACGAATTTTTCATTGAAGTGTCTTCAGCATAATTTAGCTTGTATACAAGACGAAATACGTTGGTATTACTGTACAGAATGCCCCTACAAAGCCAAACTCGACTCCAACTTGAAACACCATATCGCAAATCGACATTTAGACAAGCGGTATGCATGTGACAAGTGTCCGTATAAAAGTAGGTGGAAGGCAGCTTTTAAAATCCACGTTAATAGCAACCACTTAGCCGATGACGATGGTGAATGGTACGAGTGTGAAAAATGTCCATTCAAAGCTAGAATCAAACGCAACTTAAAAAAACACATCTACTACATGCACCCAAACGAAGACGATATTAAATGGTACGAATGCGAACAGTGTCCGTTTAGAACTAGATACGAAAGGTATTTAAAGAATCACGTGATTGCGAAACATCTAGACGCAGACAAAATTAAGTGGTACGAATGCGAAAAGTGCCCGTACAAATCTAAACGGGCCATGAATTTAAAAAATCATCTAACCTATCACCACGTAGACGAAGAAAAAGTGAAATGGTACGAATGTGAAAATTGCCCGTACAAAACTATGCAGCCGTTGTGTTTGAAACGTCACATAAAGAAACATTTAGACAAGTGGTACGAATGCGAAGAGTGTCCGTTCAAAACTAAATATAAGTCGTCGTTAGAGAAGCACGTGAACGCTAAACATTCACTAAAACCGAAAAAAATAAACGAACGTGATTTGGTTAAATGGTACAACTGTGAACAGTGTCCGTATAAAAATAGATACTTGAGAACTTTAAAAAATCACATGAAACTGGCGCATTTAGACGAACAAGAAGGTGAGTGGTACAAGTGTGACAAATGTCCGTTTAAAACCAGATTGAAGTCTAGTTTAAAACCACACATACGTAATCGTCACTTAGTAGATTCAGGAAACCCGAAATGGTATGAATGTGCCGATTGTTCGTATAAAAATGAAAAAGAATGCAACTTAAAGCGACACATAAAAAGCCGGCATTCAGACGTCACGTTGTATCAATGTAACTATTGTCCATACGCAGGTAAATCGAATCGGCGCTTAAACGAACATATAAACAACCGCCATTTGGTTAAATGGCACAACTGTGACCAGTGTCCGTATAAAAGTAGATACGTAAGAACTTTAAAAAACCACACGAAACTGGTCCATTTAGGTGAAAAAGTGTGTAAATGGCACAAGTGCGAAAAATGTCTATTCAAAACGAGACTAAAATCTAATTTAAAGCAACACATACGTAATTGTCACTTGAACGAGGAAGATGGTAAATGGTACCAATGTGATGAGTGTCCTTTCCAAACTAAATTTAAACCGGCTTTAAAGGAGCACGTAAACGTTACACATTCACAAAACCCCGAGTGGTTTAAATGTGCCAATTGTTCGTATAAAAATAAACGGAAGGGTTGTTTGAAATTACACATAACTAACCACCATTTAGATACCAAGTTGTATCAGTGCGAATTTTGCCCATATACAGCCAAAATGGGCGATACTTTAAAAACCCACATGAACATCTGCCACGCCGATGGAAAAGAAGCTAGGTGGTATAAATGTGAACAGTGTCCTTACAAAACTAAGAGTCCTACGTGTTTTTATAAACATAGAAAGAAACACGTGTAG
Protein Sequence: MSILEYCKAFTIGGKSSWRNVHTCNLCPYFTTSFFLMTNHVRRHRSSLEKFTCSDAKIELYYCKDCDFKTELTIVFKQHFNTHHGIKSERGENSCIQNYVCEKCAFETNFSLKCLQHNLACIQDEIRWYYCTECPYKAKLDSNLKHHIANRHLDKRYACDKCPYKSRWKAAFKIHVNSNHLADDDGEWYECEKCPFKARIKRNLKKHIYYMHPNEDDIKWYECEQCPFRTRYERYLKNHVIAKHLDADKIKWYECEKCPYKSKRAMNLKNHLTYHHVDEEKVKWYECENCPYKTMQPLCLKRHIKKHLDKWYECEECPFKTKYKSSLEKHVNAKHSLKPKKINERDLVKWYNCEQCPYKNRYLRTLKNHMKLAHLDEQEGEWYKCDKCPFKTRLKSSLKPHIRNRHLVDSGNPKWYECADCSYKNEKECNLKRHIKSRHSDVTLYQCNYCPYAGKSNRRLNEHINNRHLVKWHNCDQCPYKSRYVRTLKNHTKLVHLGEKVCKWHKCEKCLFKTRLKSNLKQHIRNCHLNEEDGKWYQCDECPFQTKFKPALKEHVNVTHSQNPEWFKCANCSYKNKRKGCLKLHITNHHLDTKLYQCEFCPYTAKMGDTLKTHMNICHADGKEARWYKCEQCPYKTKSPTCFYKHRKKHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -