Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000004.1:55267980-55269824[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.4 3.2e+02 3.2 4.4 1 23 112 135 112 135 0.95

2 16 0.68 41 6.1 0.9 1 23 144 167 144 167 0.96

3 16 0.0047 0.28 12.9 3.1 1 20 176 195 176 199 0.92

4 16 0.94 56 5.6 2.3 1 23 207 230 207 230 0.94

5 16 1.5 88 5.0 9.4 1 23 239 261 239 262 0.96

6 16 0.0095 0.57 11.9 1.4 1 23 271 294 271 294 0.97

7 16 0.041 2.5 9.9 1.4 1 23 303 325 303 326 0.95

8 16 0.14 8.3 8.2 4.0 1 23 335 357 335 358 0.95

9 16 0.00052 0.031 15.9 1.1 1 23 367 390 367 390 0.97

10 16 0.00086 0.051 15.2 3.8 1 23 399 421 399 422 0.95

11 16 0.0027 0.16 13.6 0.3 1 23 431 454 431 454 0.97

12 16 0.0089 0.53 12.0 2.6 1 23 463 486 463 486 0.96

13 16 0.00063 0.038 15.6 0.8 1 23 495 517 495 518 0.96

14 16 0.056 3.3 9.5 0.8 1 23 527 550 527 550 0.91

15 16 0.076 4.6 9.1 1.7 1 23 559 582 559 582 0.92

16 16 0.003 0.18 13.5 1.5 1 23 591 614 591 614 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.4	3.2e+02	3.2	4.4	1	23	112	135	112	135	0.95
2	16	0.68	41	6.1	0.9	1	23	144	167	144	167	0.96
3	16	0.0047	0.28	12.9	3.1	1	20	176	195	176	199	0.92
4	16	0.94	56	5.6	2.3	1	23	207	230	207	230	0.94
5	16	1.5	88	5.0	9.4	1	23	239	261	239	262	0.96
6	16	0.0095	0.57	11.9	1.4	1	23	271	294	271	294	0.97
7	16	0.041	2.5	9.9	1.4	1	23	303	325	303	326	0.95
8	16	0.14	8.3	8.2	4.0	1	23	335	357	335	358	0.95
9	16	0.00052	0.031	15.9	1.1	1	23	367	390	367	390	0.97
10	16	0.00086	0.051	15.2	3.8	1	23	399	421	399	422	0.95
11	16	0.0027	0.16	13.6	0.3	1	23	431	454	431	454	0.97
12	16	0.0089	0.53	12.0	2.6	1	23	463	486	463	486	0.96
13	16	0.00063	0.038	15.6	0.8	1	23	495	517	495	518	0.96
14	16	0.056	3.3	9.5	0.8	1	23	527	550	527	550	0.91
15	16	0.076	4.6	9.1	1.7	1	23	559	582	559	582	0.92
16	16	0.003	0.18	13.5	1.5	1	23	591	614	591	614	0.95

Sequence Information

Coding Sequence: ATGAAAGACCACGTCAGACGCTATCACGTATTATCGTCACCGTTTAACTGTGAACACACCAACCTCGAATGTTACAAGTGCAAGAACTGCCATTTCCAGACAGAATTGCTACTTCTTTTCAAACAACATGTTAATCAATGTGGTAGTTTTAAGAAAGAAAAGGAAGACAATTTTACGTGTGAAGAATACACCATACAAAACTATATTTGTGAAGAGTGTAATTTTGAAACACATTTTGTGGTTAAATGGATTCAACATATTGCATTTTGTTTAAAAAACGTGGGAAAGCCTCCAACAGTAAGTGAAAATGTTGATAAAAGTTTGTCTGTGTGGTATAGCTGTGATCAGTGTGAACTCAAGTATAAATGTAAAAGATCTTTAAACATGCACAAAATTTCAAAACACTTGAGTGACAATGAAATACTTTGGTATTACTGTGCAGAGTGTTCATATAGAGCCAAGCTAAAGGGTAATTTAAAGTTTCATATAAACATGCGGCACATGCATGAAGATGCCGTTAAATGGTACCAATGCCAAAAGTGTCCATATAAAACTAGAAAAGCTTTCAATTTACAAAAACACCAACCTGTGCATCACAAAATACAAAATATTAAATGGCATGAATGCCAAAATTGCTCATTTAAAACCAGGTTTAAGACGGTTTTAAATAGTCACATAAATGCTGACCACCCAGAAAAAACGAGCTTTAAGTGGTATGAATGCAAAAAATGTACATTTAAAAGTAAATACAGGTGTAGTTTAAAAAGTCACACAAATTCGCACCACGTGGATGTACAAGATATTAAATGGTATGAATGCCAAAAGTGCGCATATAAAACTAAATATAAAGCTAGTTTAAAAAGTCACGTGAATGTTCGGCACTTAGATGAACAAAATGCCAAATGGTATGAATGCAAAAAATGTCCTTATAAAGCTAAACTTAGAGAATTATTATATCAACACATAAACGCGCACCATTCAGACAAAAACGATGTTAAATGGTACGAGTGCAAACTTTGTTCATACCGAAGTATATATAGAACGTCATTACGGAATCACAACAATTCGCACCATCTGGACGATAAAGATATTAAATGGTATGAGTGCAAAATATGCCAATTTAAGAGTAAACGAAAAGGGGATCTAAAGCAGCACGTAGACACGCTTCATTCAAACGAAGCCAATACAAAATGGCACGAGTGCAGTAAATGCGGATTCAAAACTAAATATAAATCGAGTTTAATGGCACACATAAATGCGCACCACTTAGATGCACAAGATATTAAATGGTATGAATGCGAAAAGTGCCCATACAAAGCTAAACTTAAATCTAGCTTAAAAAGTCACGTGAATGTGTGGCACTTAGATGACGAAAGCGCTAAATGGCATGAATGCGAATTGTGCCCGTACAAAGCTAAACATAAATCTAGCTTGAAACTTCACGTGAATGTTCGGCACTTGGATGAACAGAATGCCAAATGGTATGAATGCGAAAAATGTCCATATAGAGCTAAACGTAGAGCGTTGTTAAACCAACACATAAACGCACACCATTTGGATAAAAAAGATGTTAAATGGTATGAATGCAAGCTTTGTCCATATAGAACCGTATATAGAGGGTCGTTACGGTATCACAACAATGCGCGCCATTTGGACGATAAGGACGttaaatggcacgaatgcgaagagtgtgcatacaagtgtaagcgaaaatgggttctaaagcagcacattgacgcgattcactcgaatagagagaacactaaatggtacgagtgcagtaaaTGTGAATTCAAAACTAAATATAGATCGAATTTAATTACACACGTAAATGGACGCCATTAG
Protein Sequence: MKDHVRRYHVLSSPFNCEHTNLECYKCKNCHFQTELLLLFKQHVNQCGSFKKEKEDNFTCEEYTIQNYICEECNFETHFVVKWIQHIAFCLKNVGKPPTVSENVDKSLSVWYSCDQCELKYKCKRSLNMHKISKHLSDNEILWYYCAECSYRAKLKGNLKFHINMRHMHEDAVKWYQCQKCPYKTRKAFNLQKHQPVHHKIQNIKWHECQNCSFKTRFKTVLNSHINADHPEKTSFKWYECKKCTFKSKYRCSLKSHTNSHHVDVQDIKWYECQKCAYKTKYKASLKSHVNVRHLDEQNAKWYECKKCPYKAKLRELLYQHINAHHSDKNDVKWYECKLCSYRSIYRTSLRNHNNSHHLDDKDIKWYECKICQFKSKRKGDLKQHVDTLHSNEANTKWHECSKCGFKTKYKSSLMAHINAHHLDAQDIKWYECEKCPYKAKLKSSLKSHVNVWHLDDESAKWHECELCPYKAKHKSSLKLHVNVRHLDEQNAKWYECEKCPYRAKRRALLNQHINAHHLDKKDVKWYECKLCPYRTVYRGSLRYHNNARHLDDKDVKWHECEECAYKCKRKWVLKQHIDAIHSNRENTKWYECSKCEFKTKYRSNLITHVNGRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568424;
90% Identity: iTF_01568424;
80% Identity: iTF_01568424;