Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000004.1:38864169-38865623[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1 61 5.5 0.7 1 23 53 76 53 76 0.92

2 12 0.0003 0.018 16.6 2.5 1 23 137 159 137 160 0.96

3 12 0.0095 0.57 11.9 3.8 1 23 167 189 167 190 0.94

4 12 0.0035 0.21 13.3 4.7 1 23 197 219 197 220 0.96

5 12 6.9e-05 0.0042 18.6 0.8 1 23 229 252 229 252 0.98

6 12 0.0017 0.1 14.3 6.4 1 23 259 282 259 282 0.98

7 12 0.13 8 8.3 1.4 1 21 289 309 289 312 0.90

8 12 0.0082 0.49 12.1 1.3 1 23 321 344 321 344 0.94

9 12 0.094 5.6 8.8 1.3 1 23 353 376 353 376 0.94

10 12 0.0022 0.13 13.9 2.2 1 23 385 408 385 408 0.97

11 12 0.047 2.8 9.7 5.3 1 23 419 442 419 442 0.97

12 12 0.00097 0.058 15.0 3.3 1 23 453 476 453 476 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1	61	5.5	0.7	1	23	53	76	53	76	0.92
2	12	0.0003	0.018	16.6	2.5	1	23	137	159	137	160	0.96
3	12	0.0095	0.57	11.9	3.8	1	23	167	189	167	190	0.94
4	12	0.0035	0.21	13.3	4.7	1	23	197	219	197	220	0.96
5	12	6.9e-05	0.0042	18.6	0.8	1	23	229	252	229	252	0.98
6	12	0.0017	0.1	14.3	6.4	1	23	259	282	259	282	0.98
7	12	0.13	8	8.3	1.4	1	21	289	309	289	312	0.90
8	12	0.0082	0.49	12.1	1.3	1	23	321	344	321	344	0.94
9	12	0.094	5.6	8.8	1.3	1	23	353	376	353	376	0.94
10	12	0.0022	0.13	13.9	2.2	1	23	385	408	385	408	0.97
11	12	0.047	2.8	9.7	5.3	1	23	419	442	419	442	0.97
12	12	0.00097	0.058	15.0	3.3	1	23	453	476	453	476	0.97

Sequence Information

Coding Sequence: ATGTTGGTAAGAAAACACTTTTTGAGGTTATGTACTTTCGTGGTTCATAAACATTTGTTCCAGGAAACCACAGCGTGCTTAAAAAAGACCCATGACTCCAGAATTTGCCCCCATGGTGAACCACCTTTCAACTGTGAACATTCCACCATCAAGAATTACTCCTGCGAAAGCTGTGATTACAAAACAGAACTTAAACTTCTTTTAAAACAGCACGTGGAACAGCGCCATGGCATTAAAAAAGAAAACGAAGATTCAACAAGTGAGAAATACGTAATACAACTTTATATTTGTGAAAAGTGTAGATTCGAGACACACTTCCTAATCAAGTGGGTTCAACACACTAGTACATGTTTAGAAAGTAAAACTAACCCCAGTTTGTTTGAAAATGAAGACGACATTGTTAAATGGTACGTATGTAAAGAGTGCCCACTCAAAACCAAGTACAAGTCTGTGTTAAAAACCCACATAAACACGCACCACTCAAAAGATATTAAATGGCATGAGTGCCAAATATGTCCATATCGAAGCAAATACACCTCTAACTTAAAAAGCCATGTGGTGAGACATCACCACGGTCAAGGTAAGTGCTACGAGTGCCAAAAATGCCAATTCAAAACTAAGTACAGATCAGCGTTAAAGATCCACACAATGACGCACCACGTCGACACCAAACATGTTAAATGGTATGAATGCCAAATATGTCCATACAAAAGTAAATACCCCCCTAATTTAAAAACCCACATGCAGAGATATCATTCCAGAGAAGCTCAATGGTACGAATGTGAAAAATGCCACTACAAAACCAGACACAAATCAGCTCTAAAAATGCACACCAACACGCAGCACACAGAAGATATTCAATGGTTTGAATGTGAACAATGTGCATTCAAGAGTAAGTACAGGTATAATTTAAAAAGCCACACAGTTGCACAGCATTCCAACAAACAGGATCTTACCTGGCACCAATGCAACGAGTGCCCTTATAAATCTATATACATTTCTAGTTTACGAAAGCACGTCAATGCCAAACATCTAGAACCGGAGAATGTTAAATGGTACGATTGTAAGTGGTGTCCATTTAAAAGCAAACATGGATCTTCTTTAAAAGATCACGTAAATGCGCGCCACTTGGACGGGAACGATATTAAATGGTTTGAGTGCAAATCTTGCGAATATAAGACTAAAAGCAGTTCGTCTTTGAACGAACACGTGAAGAGGCGCCATTTACCTAAGCAGAAGGGTGATGTTAAATGGCATGAATGCCAGATATGTCCTTTCAAAACGAAGGAAAGATGTAATTTAACTCAGCATGTTAGAAGGCGGCATAGGGATAAAAAAGAACCGGATGTTAAATGGCATGAATGCCAAATGTGTGAGTTTAAAAGTAAAGACAAGTCGAGTTTAAATAGGCATTTGAAGAGGGTACATGTGGACGAAGGACAAGAAAATAAGTGA
Protein Sequence: MLVRKHFLRLCTFVVHKHLFQETTACLKKTHDSRICPHGEPPFNCEHSTIKNYSCESCDYKTELKLLLKQHVEQRHGIKKENEDSTSEKYVIQLYICEKCRFETHFLIKWVQHTSTCLESKTNPSLFENEDDIVKWYVCKECPLKTKYKSVLKTHINTHHSKDIKWHECQICPYRSKYTSNLKSHVVRHHHGQGKCYECQKCQFKTKYRSALKIHTMTHHVDTKHVKWYECQICPYKSKYPPNLKTHMQRYHSREAQWYECEKCHYKTRHKSALKMHTNTQHTEDIQWFECEQCAFKSKYRYNLKSHTVAQHSNKQDLTWHQCNECPYKSIYISSLRKHVNAKHLEPENVKWYDCKWCPFKSKHGSSLKDHVNARHLDGNDIKWFECKSCEYKTKSSSSLNEHVKRRHLPKQKGDVKWHECQICPFKTKERCNLTQHVRRRHRDKKEPDVKWHECQMCEFKSKDKSSLNRHLKRVHVDEGQENK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568406;
90% Identity: iTF_01568406;
80% Identity: iTF_01568406;