Basic Information

Insect: Zophobas morio
Gene Symbol: -
Assembly: GCA_027724725.1
Location: JALNTZ010000004.1:7336596-7338224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.012 0.7 11.6 1.6 1 23 20 42 20 42 0.99

2 15 0.62 37 6.2 2.4 1 23 59 82 59 82 0.96

3 15 0.014 0.81 11.4 1.9 1 23 132 155 132 155 0.95

4 15 0.018 1.1 11.0 3.4 1 23 164 186 164 187 0.95

5 15 0.00011 0.0064 18.0 1.8 1 23 196 219 196 219 0.95

6 15 0.00069 0.041 15.5 6.5 1 23 228 251 228 251 0.96

7 15 0.00037 0.022 16.3 3.2 1 23 260 283 260 283 0.95

8 15 0.00011 0.0064 18.0 2.0 1 23 292 315 292 315 0.96

9 15 0.014 0.81 11.4 3.4 1 23 324 347 324 347 0.95

10 15 0.023 1.4 10.7 2.6 1 23 356 379 356 379 0.95

11 15 0.00028 0.017 16.7 0.8 1 23 388 411 388 411 0.95

12 15 0.0015 0.09 14.4 6.1 1 23 420 443 420 443 0.97

13 15 0.0076 0.46 12.2 2.9 1 23 452 475 452 475 0.97

14 15 9.2e-05 0.0055 18.2 1.9 1 23 484 507 484 507 0.95

15 15 0.0042 0.25 13.0 2.5 1 23 516 539 516 539 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.012	0.7	11.6	1.6	1	23	20	42	20	42	0.99
2	15	0.62	37	6.2	2.4	1	23	59	82	59	82	0.96
3	15	0.014	0.81	11.4	1.9	1	23	132	155	132	155	0.95
4	15	0.018	1.1	11.0	3.4	1	23	164	186	164	187	0.95
5	15	0.00011	0.0064	18.0	1.8	1	23	196	219	196	219	0.95
6	15	0.00069	0.041	15.5	6.5	1	23	228	251	228	251	0.96
7	15	0.00037	0.022	16.3	3.2	1	23	260	283	260	283	0.95
8	15	0.00011	0.0064	18.0	2.0	1	23	292	315	292	315	0.96
9	15	0.014	0.81	11.4	3.4	1	23	324	347	324	347	0.95
10	15	0.023	1.4	10.7	2.6	1	23	356	379	356	379	0.95
11	15	0.00028	0.017	16.7	0.8	1	23	388	411	388	411	0.95
12	15	0.0015	0.09	14.4	6.1	1	23	420	443	420	443	0.97
13	15	0.0076	0.46	12.2	2.9	1	23	452	475	452	475	0.97
14	15	9.2e-05	0.0055	18.2	1.9	1	23	484	507	484	507	0.95
15	15	0.0042	0.25	13.0	2.5	1	23	516	539	516	539	0.95

Sequence Information

Coding Sequence: ATGTCGATTTTGGAATATTCGACAAAATTTATTGAGGTTAGATCACCCCGTAACGAGTATAGGTGCCAAAAATGCCCGTATTTTACCTCCTCGGCGCTTCTTTTTGCAAACCATACACGAAGACATCAGTCATTAACAACACCCTTCAACTGCGAAACCGTGGATGTTGAAGTTTATTACTGCAAGGATTGCAATATCCGGAGTGAGTTGCTACTAATGTTGAAGAAACACCTAGAAAGGTGCCACAGCGCTAAAACTGAAAACCGTATGGAGTATGTCATTAGGAGCTATATTTGTAAAAAGTGCAAATTTGAAACCCACTTTTTGCTTCAATGGTTGCATCATGTAGCACTCTGTGGTGCCATGGGTGACATTAAGGAAAATTCCACGTGGTATAATTGCGATTGGTGCGAATATAAATCTAAGTACAAATCTAAGCTAAAATCACACGTGTCTTCAAGCCATGCTAAAACCCGCCGGCTTAAATGGTATGAATGTAAAAAGTGCCCTTACAAAAATCGGTTTCTAAGCAATTTAAAAAGACACATCACTGCGCACCATTTGGACGAAGACAATATTAAATGGTACAAATGCAAAGAGTGTCCGTACAAAACTAAACAAAACGCCCATTTAAAAAACCACGTAAATGCCATTCATACCGATGAAACTGTTATTAAATGGTACGCGTGCAAAAAATGCCATTACAAATGTAAACAAAAGTCCACGTTAAATAGACACGTTATGTCGGTACATGTAGATGCCAAAGATATTAAATGGCACGAATGCAAAATATGCCAATTCAAAAGCAAACAAAAATCGAACTTAAAGCAACACATAAATGCGCAACATCTGGACGAACAGGGTATTAAATGGTACGAATGCCAACAATGTCCATACAAAACAAAACAGAACTCGCATTTAAAAAGTCACATAAATGCGCTCCATGCGGACGGGGGGGATATTAAATGGTACGAATGTTACCACTGCCCATATAAATCTAAGCAAAAGTTTGCTTTAAGCAAACACATCACGTTGCGACATTTAGACGAAAAGAACATTAAATGGCACAAATGTCAACGTTGTCCGTACAAAGCTAAAGAAAAATCGTATTTAAAGCAACATATAAACGGACAACATAGCGATGAGCAAGATATTAAATGGTACATATGTGACAAATGTCCGTATAAAGCAAAGCAAAGTTCGCATTTGAAGATTCACATAAACGCGCTTCACACAAGTGAGGAGGATATTAAGTGGTATGAATGTGAAAAGTGTTCGTACAAATGTAAACAAAAATTCAAGTTGAATAGACACATGCTGTCGCGGCATGTAGATGAGAAGGATATTAAGTGGCACGAGTGTGGCAAGTGCTCGTATAAAGCTAAACAAATGTCTAATTTGAAGCAGCACGTGAAGACGCAACATCAGGATGAGAGTGCTATTAAGTGGTATGAATGCAAAGAGTGTCCGTATAAAACTAAGCAGAATTCGCATTTGAAAAGTCACGTGAATGCGCTGCATGCGAGCGAGGAGGATATTAAGTGGTACGAATGTGACGAATGTAGTTACAGGTCGAAGTATAAGCCGCATTTGCGGAAACATGTAAATGGGAAACATTCGAAGGGGTAG
Protein Sequence: MSILEYSTKFIEVRSPRNEYRCQKCPYFTSSALLFANHTRRHQSLTTPFNCETVDVEVYYCKDCNIRSELLLMLKKHLERCHSAKTENRMEYVIRSYICKKCKFETHFLLQWLHHVALCGAMGDIKENSTWYNCDWCEYKSKYKSKLKSHVSSSHAKTRRLKWYECKKCPYKNRFLSNLKRHITAHHLDEDNIKWYKCKECPYKTKQNAHLKNHVNAIHTDETVIKWYACKKCHYKCKQKSTLNRHVMSVHVDAKDIKWHECKICQFKSKQKSNLKQHINAQHLDEQGIKWYECQQCPYKTKQNSHLKSHINALHADGGDIKWYECYHCPYKSKQKFALSKHITLRHLDEKNIKWHKCQRCPYKAKEKSYLKQHINGQHSDEQDIKWYICDKCPYKAKQSSHLKIHINALHTSEEDIKWYECEKCSYKCKQKFKLNRHMLSRHVDEKDIKWHECGKCSYKAKQMSNLKQHVKTQHQDESAIKWYECKECPYKTKQNSHLKSHVNALHASEEDIKWYECDECSYRSKYKPHLRKHVNGKHSKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -