Zmor006329.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zophobas morio
Gene Symbol
-
Assembly
GCA_027724725.1
Location
JALNTZ010000004.1:24903029-24909983[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.64 38 6.2 4.1 1 23 297 319 297 319 0.96
2 13 0.072 4.3 9.1 1.5 1 22 323 346 323 349 0.92
3 13 0.0065 0.39 12.4 2.4 1 23 393 416 393 416 0.95
4 13 0.00019 0.012 17.2 1.8 1 23 422 444 422 444 0.96
5 13 1.9e-05 0.0011 20.4 2.2 1 23 457 480 457 480 0.95
6 13 1.8e-05 0.0011 20.5 3.9 1 23 486 508 486 508 0.98
7 13 0.00031 0.019 16.6 4.4 1 23 514 537 514 537 0.98
8 13 0.00047 0.028 16.0 3.1 3 23 545 565 545 565 0.99
9 13 8.6e-07 5.2e-05 24.6 1.6 1 23 571 593 571 593 0.99
10 13 1.7e-06 9.9e-05 23.7 2.9 1 23 599 621 599 621 0.99
11 13 0.11 6.5 8.6 6.6 1 23 627 649 627 649 0.98
12 13 3.1e-06 0.00019 22.9 0.8 1 23 655 677 655 677 0.98
13 13 3.6e-07 2.2e-05 25.8 0.4 1 23 683 705 683 705 0.99

Sequence Information

Coding Sequence
ATGGAGTTGACAGCGCTGATATGTGAAATGTCTCTTTGTAGACTATGTGGCCAGGAAAATGTAAATGGAACAGAATTGTTCCCCACGACAGAAAACGAAACCGATTTAAGTGAACTCGTTAACAAATATTTGCCGCTAAAGATCGAAAATGACAGAAAATTTCCAACAAAAATCTGCCCCGGGTGCAACATTCAATTGGAAGCTACGATCTCGTTCATGGACCTGATAGTTCAAGGGCAAGTAAAGCTGAGACAGTTGTACAAGTTGCAGCAAGATAAGTTGTATCGACAGGAAAAACAAAGGCAACAGTTGGAAGAGGCTTTGAAAAGTGTGAATCCTAGTTCGAGTGTGGACACTTATACTATACAGTCTGATGAAACCGGAGAGAAGTTTTTAATACAAATTTTCTCACAAGGACCTCTTTTCCCTCCAGAGCACGAGTTATCCTTAAGAGCTGAAGGTCTTACAAGACCTAGGCGAAAAAGAGGAAGGCCACCCAAACCTATACTCACAAGCAAAGAGGATGAACCAGCCCCAAATATTGCAGAAGAATTAAAAAATGAGGAAAAAGAACAAATCGATGAAACAGAAGATGGTAAAAGAAAGAGACGGATTAAAGTACCTACTCGTTATTCTGAAGCAATACAAGGAAAAGAATTGGATAAAGTATTTAAACAAGAAGGTGTAATAGATGAAGAATCTATATCCGATGAGGATGAAGTATTAGAAAGTGATAATTCAGCTAAAGTGGAGGAAGTTATTGGTCGGTTAGAAAATGAAAATGGAGAAGATTTGGGACAACCAGTTATTCTAAACAAAAATTTACATAAAGCGAGGTTTAAAAACAAAACAGTTGGGACAGGTAATCAATCAAAAAGAAAAAGGAAATATCAGTGTGAGATGTGTGGACGCGAATTTTTGCATCATGGAAGATATGAACTTCACAAAAAGATGCATGAACTGGAATATAAGTGCAGTCATGATGACTGCAATTTTGAAACTGATAAAAAGTCGTCTCTGGAACAACATCAGCAGGAAAGTGGTCATTCAGACTTTACAGTGAGCGAAAAAGTTGATAAATATGGAACACTACAATTGCCAACAGAAATTCAGCCAAACCAATCAAAGAAAAAAGAAAACAATCAAACCGATAGCATAGTAAACGAGAAAAGAGAATTCGTCTGTAAACAGTGCAATAAAGCTTTTTCGTGTAAACAAAACTACGAAGTTCACTTAAAGGCAGTCCATGCTGGTGAGCGACCGTTCGCTTGTGAAATCTGTAATAAACGTTTCTCTTACGCTAATTGTTTAAAAGTACATCTTCTACAGCATTACTCAAAAACAGACAACGACGATCTCTCTACGCAATACAAGTGTCCATCATGTCCAAAAACCTTCCGCCATCCCAGCAGTCTGCAGTACCACAAAGACTCAGAACACACAAATGGCCGCAGATTTGTCTGTAACAAGTGTAATAAACCCTTTAAGCACCGGCAGCTCCTCCAGCGGCACCAAACCGTCCATTCCAATGAGCGTCCTCACCGGTGCTCTCAGTGTAATTCCGCCTTTAAAACGCGAGCAAATCTCATACATCATACTCGAACGGTACACGCAGGACAACGCAGCCACTGGtgttcacaatgtgataaaacttttgcccacaagacagcttttacattgcatcagaggtggcacgctggagatcgtccatatcagtgcgaattttgtaaaaagtccttttcacaaaagggtaatctggtggaacacagacgtatacacacaggagaaaaaccgtaccaatgtgattattgtggaagagcgttcacaacgtcgtcacagttcaggctacacaagaaaagacatctggatgagcgacctcacagatgtgaatattgtccaaagagttttctatataaggttactttaaggtgtcatatgaggaggcatttggatgagcggccattcaaatgcccgcactgtcccaaaacattcccagaagcttggactttgaagaagcatgaaagggtacatacgggagaaaaaccgtacaagtgtgacttgtgctctaaagcgtttgctgatagctcgaatttggCCAAACATCGTCGCATCCATCGAAATTTTAAAGATAAACAGATGCTGTTTGTTACTTATGAAAAAGATGTAGGTGATGCTATTGTCACCTACATTGAACCTCAAGACTCAGAGTCAAACACACTTGTTCATGTTACTGAAGATGTTGAGCATCAAACAATACAATTGCAACAGTTAGTTGATCAAGAAGGAAACCCCATCAGTTTTATTACACAAGATGGACAACAAGTTAAAGTTGTGACGAGTACTGAAGATGGTCAAGAGAACATTCAGGGGCTGCTACCTGATGGTACTTTGGTACCAATTAGCTTAACTACGGTTCCTGATAAGAATAAATCACTGTTGAATTCGGTGGACGATTCGGCGCAGAAAATTGATGTGCCGTTAGAAGGGCAGTTATTATCTACAGATATCCACTTTTTACCCAGCGATGATCCAAAAGTTCCTGGCAACATCCAATTTGTCGCTGAAGATAATCAAAATATGTGCTTAGTAACAACTTATAACATTGAAGATTCAATTAATCCCCAGTATCTTAATATGCCTTAG
Protein Sequence
MELTALICEMSLCRLCGQENVNGTELFPTTENETDLSELVNKYLPLKIENDRKFPTKICPGCNIQLEATISFMDLIVQGQVKLRQLYKLQQDKLYRQEKQRQQLEEALKSVNPSSSVDTYTIQSDETGEKFLIQIFSQGPLFPPEHELSLRAEGLTRPRRKRGRPPKPILTSKEDEPAPNIAEELKNEEKEQIDETEDGKRKRRIKVPTRYSEAIQGKELDKVFKQEGVIDEESISDEDEVLESDNSAKVEEVIGRLENENGEDLGQPVILNKNLHKARFKNKTVGTGNQSKRKRKYQCEMCGREFLHHGRYELHKKMHELEYKCSHDDCNFETDKKSSLEQHQQESGHSDFTVSEKVDKYGTLQLPTEIQPNQSKKKENNQTDSIVNEKREFVCKQCNKAFSCKQNYEVHLKAVHAGERPFACEICNKRFSYANCLKVHLLQHYSKTDNDDLSTQYKCPSCPKTFRHPSSLQYHKDSEHTNGRRFVCNKCNKPFKHRQLLQRHQTVHSNERPHRCSQCNSAFKTRANLIHHTRTVHAGQRSHWCSQCDKTFAHKTAFTLHQRWHAGDRPYQCEFCKKSFSQKGNLVEHRRIHTGEKPYQCDYCGRAFTTSSQFRLHKKRHLDERPHRCEYCPKSFLYKVTLRCHMRRHLDERPFKCPHCPKTFPEAWTLKKHERVHTGEKPYKCDLCSKAFADSSNLAKHRRIHRNFKDKQMLFVTYEKDVGDAIVTYIEPQDSESNTLVHVTEDVEHQTIQLQQLVDQEGNPISFITQDGQQVKVVTSTEDGQENIQGLLPDGTLVPISLTTVPDKNKSLLNSVDDSAQKIDVPLEGQLLSTDIHFLPSDDPKVPGNIQFVAEDNQNMCLVTTYNIEDSINPQYLNMP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480318;
90% Identity
-
80% Identity
-