Basic Information

Insect: Zophobas morio
Gene Symbol: Scrt1
Assembly: GCA_027724725.1
Location: JALNTZ010000002.1:17376627-17395197[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00072 1.7 9.9 0.7 16 38 259 278 253 283 0.88

2 5 0.041 93 4.3 0.4 17 27 291 301 281 307 0.78

3 5 0.0061 14 6.9 0.3 17 28 317 328 309 340 0.80

4 5 0.00025 0.58 11.4 0.3 19 41 347 366 335 368 0.88

5 5 0.033 76 4.6 1.5 14 43 370 396 366 397 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00072	1.7	9.9	0.7	16	38	259	278	253	283	0.88
2	5	0.041	93	4.3	0.4	17	27	291	301	281	307	0.78
3	5	0.0061	14	6.9	0.3	17	28	317	328	309	340	0.80
4	5	0.00025	0.58	11.4	0.3	19	41	347	366	335	368	0.88
5	5	0.033	76	4.6	1.5	14	43	370	396	366	397	0.88

Sequence Information

Coding Sequence: ATGCCGCGCTGTCTCATGGCGAAGAAGTGGAAGGCGTACCCGTGGCCGGAGCGGCCGGAGCCGCCCGACCACCAGGACGAGGACGAGGAGATCGACGTCGTCGGAGACGCGCCGTCCTGCTGGGGACCGTCGAGTCCGACGGCGGGCGCCACGGCGCCGAGTCCGCCGCCGACGTCGCCGAACGGAACCACGCTCGTCTATAACGGTTACCTTCACGAATTCTCTCCTTCAACCTACACAACAACTACCTTCATTCCACGCAACGACCAACCCTTAAGCGGCCAAACGCAGCCATCCTACGCCACTCTGCGGACCGTGGTGGAAACGCAAGACCTCCGGCCCGAATACAGCACTCCCGCGCCCGCCACTCCCGCACCTCGTTCCAGAAAGTCTCTGTCCATGACTTTCACCAGCACGGGAGCGGCGCTGTCCCTGCCTCCCAAAAAGAAGGACATTTACCGGCCCTACTCCCTCGACGACAAACCCGCCCCGCCACCGCTCCCCCCGCCCGCCATCCGAGTACCCGCCGAGGAGGACCTGCACGCGGCGCACGCCATCCTCGACCTCAGCGCGTCGACGACGGTCTTCCTGCCGCCGCCGCCGCCGCCCCCCGAGGACCGGCGCGAGCCGGACGACCTGCAGGCGCCGCCCAAGACGGGCAAGACCATCGCCTACACGTACGAGGCCTTCTTCGTGAgcgacggccggtccaagaagcgcttcagcccggacgagccgggcctgccgggcaagaccctgaccggcgagaagcccaagtacacgtgcagcgagtgcggaaagcagtacgccacctccagcaatctgtcgcgccacaagcagacgcaccgcagcctggactcccagtcggcgaagaagtgcatgacgtgcgggaaggcctacgtgagcatgccggctctggccatgcacgtgctcacgcacaagctggcgcaccggtgcggggtgtgcggcaagcagttctcgaggccctggctgctgcaaggccatctgaggtcgcacacgggcgagaagccctacggctgcgcgcactgcgggaaggccttcgcggacaggtccaacctgcgcgcgcacatgcagacgcactcggctgataagaacttcgagtgtccgcggtgccataagacgttcgcgttgaagtcctacctgaacaagcacCTGGAATCGGCGTGTTTGAAGGAGGAGGCGCCGCCGCCGACGCAGAGCTGCGCCGAAGAGGTGGCCAGGGAGGTGCCGGTGCCCATTAGGGTCTACGCGGCCTGA
Protein Sequence: MPRCLMAKKWKAYPWPERPEPPDHQDEDEEIDVVGDAPSCWGPSSPTAGATAPSPPPTSPNGTTLVYNGYLHEFSPSTYTTTTFIPRNDQPLSGQTQPSYATLRTVVETQDLRPEYSTPAPATPAPRSRKSLSMTFTSTGAALSLPPKKKDIYRPYSLDDKPAPPPLPPPAIRVPAEEDLHAAHAILDLSASTTVFLPPPPPPPEDRREPDDLQAPPKTGKTIAYTYEAFFVSDGRSKKRFSPDEPGLPGKTLTGEKPKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCHKTFALKSYLNKHLESACLKEEAPPPTQSCAEEVAREVPVPIRVYAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01481193;
90% Identity: iTF_00415390;
80% Identity: iTF_01568355;