Zmor004390.1
Basic Information
- Insect
- Zophobas morio
- Gene Symbol
- -
- Assembly
- GCA_027724725.1
- Location
- JALNTZ010000004.1:1243745-1247850[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-19 3.3e-16 59.9 0.0 1 45 120 165 120 165 0.98 2 2 0.043 23 6.0 0.0 1 13 172 184 172 194 0.85
Sequence Information
- Coding Sequence
- ATGGACTGCAAGGACGTGGATATATACGAGACTTTTTTTAAGGAAAACAGTACGAACACTATCGTGAGTTTTACCGCCGAAGAAGACACATTAGGGGGCGAACATGAGTTTAGTTTTGAGCATTCAATAGGGGTTTGTCTTTATGGCGAAGCGGAAGTTGCCGGCGTTATTTTGAGACTAACATTCCTCGCTTTAAGCGAATTGACTCTAGATAAGTTGTATCAGAGGGAGATACTGGTTACCAATAAATCACAGATTTTACCTGTGAAGGTGGTTTACCAAAAGGTCACTTTTGAACAACTTGCAAGAGATGTTCCTCCCGAAAAGAATGTCGTTAGAAAAGTGGGCGTACTGTGGACGCCCGAGGACCTCGAGAAGGCGCTGGAGTCCATCCGCTCGGGGCAGACGTCCGTGCAGAAGGCCTCCACCGAGTTCGGCATCCCCACGGGGACGCTGTACGGCAGGTGCAAGCGGGAGGGCATCGAGCTGTCGAGGTCCAACCCGACGCCGTGGTCGGAGGACGCGATGGGGGAGGCGCTGGAGGCCGTGAGTACCACGGAAGTTGGGAAATATAACGTCAATATAAACGTCTTAGTCAACGACAGTACGTTGTATGAAGTGACAGCCGTAGCTCAAGTGGTTCCCAAAACCCTTAAAATAGAAAGCGAGACCATAGAATTCTCGCAAAGAGATGGACATTTGAAATTTTTTTTATTAATTAACAGTCTCAACGCGTACACCGTATTTTCCTGGGACGTGCCTGACGGTTGTTACAAGATATTCCCCATGTAA
- Protein Sequence
- MDCKDVDIYETFFKENSTNTIVSFTAEEDTLGGEHEFSFEHSIGVCLYGEAEVAGVILRLTFLALSELTLDKLYQREILVTNKSQILPVKVVYQKVTFEQLARDVPPEKNVVRKVGVLWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVSTTEVGKYNVNINVLVNDSTLYEVTAVAQVVPKTLKIESETIEFSQRDGHLKFFLLINSLNAYTVFSWDVPDGCYKIFPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -