Znev010392.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- stc
- Assembly
- GCA_000696155.1
- Location
- NW:534837-554186[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 1.1e+04 -4.2 1.6 15 19 454 458 453 458 0.81 2 13 0.015 87 2.7 0.7 4 10 487 493 486 493 0.96 3 13 2e-07 0.0011 18.3 13.7 2 18 505 520 504 521 0.92 4 13 5.1e-06 0.029 13.8 14.6 1 19 557 575 557 575 0.97 5 13 0.34 2e+03 -1.7 1.1 10 16 604 610 603 611 0.88 6 13 1.1e-07 0.00062 19.1 14.0 1 18 615 632 615 633 0.97 7 13 0.81 4.7e+03 -2.9 2.6 5 10 664 669 664 669 0.95 8 13 0.00013 0.76 9.2 13.1 4 19 682 697 675 697 0.87 9 13 2 1.1e+04 -4.5 1.6 5 10 726 731 726 731 0.90 10 13 0.00017 0.97 8.9 6.9 1 11 737 747 737 749 0.97 11 13 0.89 5.1e+03 -3.0 0.8 4 10 752 758 751 759 0.70 12 13 1.4e-09 7.8e-06 25.2 16.9 1 19 764 782 764 782 0.98 13 13 2 1.1e+04 -9.9 14.6 4 19 819 839 815 839 0.74
Sequence Information
- Coding Sequence
- atggCAAATTGGGATGGATCTTGTTTTAGAGGTGATgaacacaattataatttgattCCATCTGGATGCGAAGGAAGTAATGTGCAATCTTTTCCTGGAACTTCTGTTGATTGGACATGCAATTCTGTTTCTGAAGAGATGCCACAAACATCCATAGATGGTCTTCAGCAGTGGAATACatcaattttttcaaatcaataTCAGCAGCCAGTCTTTAGACTGCCAGTTTCATCAGGTTATGTAGATCAAAACTTTCAGGGTACAAACTCAAATATAGGGTACAGTGTTGAATTTAACACCAACTTGAATCCAAATGAAGTACATTTGGAAGAAATGGCAGCAGGATCATCTCTGACACCTACTGCAGGGGAATTTATTCCAAGACCAGCTTCAGTACAGTTGAGCTCTGAATTAGGAAGGGGTGCTGAAGAGTTAGACATAAATTGTAGGAATGCTTCAGAACAATCCAGACCAGTGGCTTCAAGTACTTACAGTGACTGTGATCAAGGTAATCATGGGTTCAGAAGAGATGGTGGtgattcaaaacattttcattcccATCGAAACTCATCATCTGGAGCTGTTCGTGATGTTTTCCACAGTAATCGAAAAGGAAATGCTCGTGGGATATTACAAAATACTGCTACAAATTTTAAGTCATACAGTATGGAGAAAGCAAAGAATCAAGATCGGCAGAGGTTATTGGCTGAAGCAGCAGCATTTCTGACTTCATCTGGTAATCCTGATATAGCACCTGTTTCAGGTGTTGACAGTAATTTGAGTATACAAGTGAAGCAACAGAATATGAATGTTGGTTCTGTGTATCGACCTAAAGGTAAAGGAGAATTTAATAGGACATATACTTATCCAAGCAAGCACAATGGTGATGTATCAGATGTAAATTTTAGTTACAATGTTCAGCAGCAGCCAGAAAGCTTCAGTCAGCAAAAGAGGAGAAATGATAGCTATCACAGTCAACACTACCAAAGTAGCTTTCATAATCAGAGAAATGTTACAGTGTCAGAAATGAGCATTGGAAGCAAGCTGAACAACCAGTATCGACTTCCTAACTGTAACACTATTTCTGGTTATCGTGGTACAGGAGCTGCACGTCGTGCATCTCCTAGGAAGGATGCAGACCAGTATGGAGAGCGTAGTGGTAATACAACAGATGATGATGCTAGCCAGAGAGAGCGTCTTACTGAACAGCTGACACGTGGAATTCTTGAATGCCTGGTGTGCTGTGATAGAGTCCGACAGCATGATCCTGTGTGGAGTTGTACCAACTGCTACCATGTGTTgcatttgaaatgtattaaaaagtGGGCAAAGTCTTCAAAGGCAGAAACAGGTTGGCGATGTCCTGCATGTCAAAATGTGACATCCAAGATTCCATATGAGTACCATTGCTTCTGTGGGAAAGTGCGTGATCCAGAATGGAATCGAATGGATGCGGCACATACATGTGGACAAGTGTGTGGGCGTTCTCGGACTGACAGACGCCCAGACTGTGCTCATCGCTGTACTTTGCTCTGTCATCCTGGTCCCTGTCCACCTTGTGCAGCCCAGGTCAATAGGAACTGTGGTTGTGGGAAGAAATTGCAACTTGTCAAGTGTGGATCAGACCAACCCCTGCTCTGTGGTGCTGTGTGTGGAAGAGAACTTAATTGTGGTATTCATCACTGTACCAATAATTGTCACACAGGAAACTGCCTTGAATGTCAGAAGAAGGTAATACAAGAATGTCATTGCAGGAAAGTGACTCGTGAAGTTCTGTGTACACAAGAGTCCTCAGCTTCAAAATACTTCTGCTGTGATGGACTATGTGAAAAGAAACTGCTCTGTGGGAATCATCTTTGCAGTCTGAAATGTCACCCTGGACCCTGCCCTGACTGTGAATTCTCTCCAGACAAGGTGACACACTGTCCGTGTGGAAAGATGTCTCTAGCAGATAAACAGATTCGATCAAGCTGTCTAGATTCCATCCCTACTTGTGAACAGAAGTGTATGAAAAGACTGCAGTGTGGACAGCCAAGTGATCCACATTCATGTCAGATGGATTGTCACATTGGGCCATGTCCTGTGTGCCCTCTGACTACAATGGTTAAATGTAGGTGTGGCAATATGGATCGTGAAATAGCATGCCAGGATCTCACCGCTAAGGCTGATGATGCTAGGTGTGAGAAGAGATGTACAAAGAAACGGTCATGTGGAAAGCACAAATGCAACCAGCTTTGTTGCATTGATAAGGATCATGTATGTCCTGTTCCTTGCAACCACCAGTTGAGCTGTGGACAACATCGCTGTGAGGAGACTTGTCACCGTGGTCACTGCCCACCTTGTTGGAGAACAAGTTTTGATGAGTTATATTGTGAATGTGGCGCTAGTGTAATGTACCCACCCATCCCTTGTGGTACAAGACGCCCTGAATGCTCAAAGCCTTGTTCACGTACACATTCATGTGAACATCCAACTCTTCATAATTGCCACAGCCAGGCTGTTTGTCCACCATGTACAGTACTCACACAGAAATACTGCTATGGTAAACATGAGGTAAAGGTAACATGTGAGTGTGGGCATCGTTCAATGAGTAGAGCATGTTCAGACAATGCAAAGGAGTACCAGCGTATTGCAACCTCACTCCTTGCTTCCAAAATGGCTGATATGCAACTTGGTCATTCTGTTGACATTAGGGATCTCCTGGGAAACCCTTCAGCTAGGAAGTTGAGTCTAAAAACgttGGACTGTACTGAAGAATGCCGCTTGATTGAGCGAAATCGTCGACTTGCTATCGGATTGCAGATCCGTAATCCAGACTTGAGTTCTAAACTGACGCCACGTTACTCTGAATTCATGCGTCAGTGGGCTAAGAAAGATCCACATTTCTGTAACATGGTCCATGATAAACTTACAGAATTAGTGCAGCTTGCTAAACAGTCAAAGCAGAAGAGCCGTAGCTATTCATTTGACTCGATGAATAGAGATAAGAGGCATTTCATACATGAGTACTGTGAACATTTTGGCTGTGAATCTGTTGCTTATGACCAGGAACCAAAGCGCAATGTTGTAGCTACAGCTGCTAGAGACAAGgCATGGTTACCAAGTATGAGTCTTTTGGAAGTGATCCAAAGGGAAAGTGGGCAAAGGAAAATTCCTAAACCTGTCATAAGTTCAACTCATACACCATCACAAAGAATGATGGATGTTTTGCCAGTGAAGTGTTCTCAGTCACAGTCAACTTCCAATGTGGCTAAATCATGTAGTTCTATTGCACCCATAAAATACAGTCAGGAGGAAGATGAAATTGACTATTTTGATTTCTCATAA
- Protein Sequence
- MANWDGSCFRGDEHNYNLIPSGCEGSNVQSFPGTSVDWTCNSVSEEMPQTSIDGLQQWNTSIFSNQYQQPVFRLPVSSGYVDQNFQGTNSNIGYSVEFNTNLNPNEVHLEEMAAGSSLTPTAGEFIPRPASVQLSSELGRGAEELDINCRNASEQSRPVASSTYSDCDQGNHGFRRDGGDSKHFHSHRNSSSGAVRDVFHSNRKGNARGILQNTATNFKSYSMEKAKNQDRQRLLAEAAAFLTSSGNPDIAPVSGVDSNLSIQVKQQNMNVGSVYRPKGKGEFNRTYTYPSKHNGDVSDVNFSYNVQQQPESFSQQKRRNDSYHSQHYQSSFHNQRNVTVSEMSIGSKLNNQYRLPNCNTISGYRGTGAARRASPRKDADQYGERSGNTTDDDASQRERLTEQLTRGILECLVCCDRVRQHDPVWSCTNCYHVLHLKCIKKWAKSSKAETGWRCPACQNVTSKIPYEYHCFCGKVRDPEWNRMDAAHTCGQVCGRSRTDRRPDCAHRCTLLCHPGPCPPCAAQVNRNCGCGKKLQLVKCGSDQPLLCGAVCGRELNCGIHHCTNNCHTGNCLECQKKVIQECHCRKVTREVLCTQESSASKYFCCDGLCEKKLLCGNHLCSLKCHPGPCPDCEFSPDKVTHCPCGKMSLADKQIRSSCLDSIPTCEQKCMKRLQCGQPSDPHSCQMDCHIGPCPVCPLTTMVKCRCGNMDREIACQDLTAKADDARCEKRCTKKRSCGKHKCNQLCCIDKDHVCPVPCNHQLSCGQHRCEETCHRGHCPPCWRTSFDELYCECGASVMYPPIPCGTRRPECSKPCSRTHSCEHPTLHNCHSQAVCPPCTVLTQKYCYGKHEVKVTCECGHRSMSRACSDNAKEYQRIATSLLASKMADMQLGHSVDIRDLLGNPSARKLSLKTLDCTEECRLIERNRRLAIGLQIRNPDLSSKLTPRYSEFMRQWAKKDPHFCNMVHDKLTELVQLAKQSKQKSRSYSFDSMNRDKRHFIHEYCEHFGCESVAYDQEPKRNVVATAARDKAWLPSMSLLEVIQRESGQRKIPKPVISSTHTPSQRMMDVLPVKCSQSQSTSNVAKSCSSIAPIKYSQEEDEIDYFDFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -