Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 8.9e-20 1.7e-16 58.9 4.7 1 35 212 245 212 246 0.98

2 3 7e-20 1.3e-16 59.2 5.0 1 35 266 299 266 300 0.97

3 3 0.42 8e+02 -0.9 0.1 12 24 301 312 299 313 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	8.9e-20	1.7e-16	58.9	4.7	1	35	212	245	212	246	0.98
2	3	7e-20	1.3e-16	59.2	5.0	1	35	266	299	266	300	0.97
3	3	0.42	8e+02	-0.9	0.1	12	24	301	312	299	313	0.88

Coding Sequence: ATGGGAGTGGCGTTCATGCACCACCAGGACACCACGGGATCGAGTCTGTGTGCCAGCAACAGTAGCTCGCTGGACATCAAACCGGGGGTGAACATGCTGAACTCCTCAGCCTCTGCGGCGGGGACCTGCCCTGGCGGAGCCAATGCTTCTGGCGGCGTAAAACAGAGAGAAGGTACATCGTCCACGGCTTCGAATAATAGTTCCGCTTTTTCTACATCATCATCCGCGGCGTCTCCCGGGGAAGCTTCTCCAAGAGACTCTTCTGGGCCCCAGCAGCTCCACAGTTCCTCCTCCGCCCTCCATCCACAGTCATCGCATGGTATGAGTAGTCAGTCGCATCACTACCCTCCACCGCCGCCCCTGCAGCCGTCCCCTTACCACCACGACGCCGGTGGTGGCTCGACCCCGTCGTATGTGAGTTATCCGTCCCATCACCTGAACCATCACCACCACCTGAACCACCACGGTATGTcccaccatcaccaccaccctGCCGCCATGTTTAGCACCAAGTCTCTGTCGGGGCACCACCAGATGGTGTCCGGGTCTCCGGGTGTCGCCGGAGCAGTTTCCGGGGCCGCGAACTCGAAAACGTCCAGAACGAAATCCAGGTCGAGTGCCGAGGGAAGAGAGTGCGTCAACTGCGGGGCGACATCGACGCCATTATGGCGCCGTGACGGAACGGGACACTACCTGTGCAACGCGTGTGGCCTATACTACAAGATGAACGGACAGAACAGGCCTCTCATCAAGCCAAAGCGACGGCTGTCGGCGGCGCGGCGGGCGGGCACCAGTTGTGCCAACTGCAAGACAACAACCACGACGTTATGGCGTCGGAACCAGAATGGAGAGCCGGTCTGCAACGCCTGCGGATTATACTACAAGCTGCACAATTTGTCTTGGCGATCGTCAATTCAGCGTAATGACGTGTGCAATTGTAGCGAGCAAACGGAGCGTGTAGATACGAGTGAGAATCGAGAGGGGCTCTACCGGAACCCGGAAACGGAAATGCTTAGCACGCGTAGCAGGCTGCTAGTTCCGCCCAGACACTTGACTTTTGTTTGCTAG
Protein Sequence: MGVAFMHHQDTTGSSLCASNSSSLDIKPGVNMLNSSASAAGTCPGGANASGGVKQREGTSSTASNNSSAFSTSSSAASPGEASPRDSSGPQQLHSSSSALHPQSSHGMSSQSHHYPPPPPLQPSPYHHDAGGGSTPSYVSYPSHHLNHHHHLNHHGMSHHHHHPAAMFSTKSLSGHHQMVSGSPGVAGAVSGAANSKTSRTKSRSSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNLSWRSSIQRNDVCNCSEQTERVDTSENREGLYRNPETEMLSTRSRLLVPPRHLTFVC

Sequence clustering based on sequence similarity using MMseqs2