Basic Information

Insect: Zootermopsis nevadensis
Gene Symbol: ECU06_1150
Assembly: GCA_000696155.1
Location: NW:406366-412113[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.21 7.4 6.6 2.0 1 23 658 681 658 681 0.95

2 14 0.05 1.8 8.6 0.4 1 22 790 811 790 813 0.82

3 14 0.016 0.58 10.1 1.2 2 23 822 843 822 843 0.97

4 14 0.00012 0.0045 16.8 1.4 2 23 846 867 845 867 0.97

5 14 2.3e-05 0.00083 19.1 1.9 1 23 873 895 873 895 0.98

6 14 4e-05 0.0014 18.3 4.3 2 23 902 923 901 924 0.94

7 14 0.46 17 5.5 3.0 5 23 937 955 936 955 0.96

8 14 6.4e-05 0.0023 17.7 4.4 3 23 962 983 960 983 0.95

9 14 0.0043 0.15 11.9 0.2 2 23 999 1019 998 1019 0.97

10 14 1.7e-05 0.00063 19.5 1.9 1 20 1025 1044 1025 1047 0.92

11 14 0.011 0.4 10.6 4.2 1 23 1055 1077 1055 1077 0.98

12 14 0.033 1.2 9.2 8.6 1 23 1083 1105 1083 1105 0.98

13 14 2.6e-05 0.00094 18.9 2.9 1 23 1111 1133 1111 1133 0.98

14 14 0.0024 0.086 12.7 5.4 1 23 1139 1161 1139 1162 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.21	7.4	6.6	2.0	1	23	658	681	658	681	0.95
2	14	0.05	1.8	8.6	0.4	1	22	790	811	790	813	0.82
3	14	0.016	0.58	10.1	1.2	2	23	822	843	822	843	0.97
4	14	0.00012	0.0045	16.8	1.4	2	23	846	867	845	867	0.97
5	14	2.3e-05	0.00083	19.1	1.9	1	23	873	895	873	895	0.98
6	14	4e-05	0.0014	18.3	4.3	2	23	902	923	901	924	0.94
7	14	0.46	17	5.5	3.0	5	23	937	955	936	955	0.96
8	14	6.4e-05	0.0023	17.7	4.4	3	23	962	983	960	983	0.95
9	14	0.0043	0.15	11.9	0.2	2	23	999	1019	998	1019	0.97
10	14	1.7e-05	0.00063	19.5	1.9	1	20	1025	1044	1025	1047	0.92
11	14	0.011	0.4	10.6	4.2	1	23	1055	1077	1055	1077	0.98
12	14	0.033	1.2	9.2	8.6	1	23	1083	1105	1083	1105	0.98
13	14	2.6e-05	0.00094	18.9	2.9	1	23	1111	1133	1111	1133	0.98
14	14	0.0024	0.086	12.7	5.4	1	23	1139	1161	1139	1162	0.95

Sequence Information

Coding Sequence: ATGGAGAATGGGTTGAGCCCTGTTTCTTGTCCTGTGTGTACTCTGTACATGCGGGAAGGTGTTACATTACAAAGCCATCTTGACACTCATCCCAAGGATCAAGTTATTGCTGCACTGGTTAGAATTTCTGCAGGAGGCAGCATCAGTGCCATAGAAAACCAAAGTGATAATGAAACTATGCCAGTTGTCATACCCGAAAATGCTCCTTGCAGTCAGGAACCATTATCAGGTCCTCAGTGCTTTCCACCGAGCAGCAGTCACTTTACAACAGCCATAACATACCAACAGTTCTTGAGTAGCAATGGCTCTGCCTCAAGTACTGTAATCCCACAGTATGTCTCCATGCCTGCCATACTGTCAGCACCCAGTACCAGTCATTCAGCCACAAATCAAGCCGCTTTTATGCAAATGCTGTATAACCCTTACATGAttcaacagcagcagcaacaattTCAGTTGCTGAGCTCAGTAACTTCCCCTTCACAGCCACAGTCTTTCATACGTCATGTGGTTCCATCTTATCCCACACATCATGTTTCCCAGTCACAAATGAATCTTTCTTCCAATTCAATTCCTCTCAGTGCTTCATATCAAACCAGTGATTTTCCTGCAGACTGTGCTCCACAAGGTTTCCAGAATACAAGTAATATAACACCTTCTTCACTTACTCTTCCAGcttcctcttccaattctttcCCTCATTCCACATTGTCCTGTTCTGTATCTTCACCAGTATCAGCAAGAGGTACCATTCCAACTGGCTATTTGCTCCCCTCAGTAGGGGAGCATGCTGCTAATCAAATTGAACAAGGTATTGTAAACAAACCAAGAACACCGCCATCAGATCAACACAGAAACGTTTCCATTTTGAATGGAATAGCCCAGTATTCGAAGCAGCAGCTGGAAGAAGAAACTGCCATAGAAAATGTTCctgaagaaaatttgtttccagataGAAACTTATCTAGTAGTACAGGTGGTGTGAGTGCAGTGTACAATGGTGTGGCCACACAAACGAGTGACATGCAGTATGAATATGAGGACCAGAAGAGCCCCTACATATCTAAGGATGAAGAGGCAGCTGTTACTCTAGATGGTGTAATTGGCATGCAGCAAGAACTGCCAAGGAGTGAATCTGTAAATGTGAGGGTGAGGAAGGATCTGAATGACATGGCAGTCAGTCCAATGGTGCAGTCACATGATTCTGGGTCTGAAGAGAGTACAGAGAACGAGTATTCTGATATGAGGAATGAGGATATGACACAAATATCAGGTATTATTAGGAATGCTCTGAGAATCCAGCCGCCTCCGATCAGTGTAGCAGACAGTGATGAGTACATCACATCTGACAGGCAGTACTCTGGGCAGGATGACCCAAGTGAAGAAGAACCAGCTGTGAAAGAGTTATCAGAAACAGGTGAAGACAAGTGTGACAAGCCTGATGAGACAAATGAGGAAAGTGGCAACAGGTTTCTTGATCTGGATTCATCTGAGGCTGTTAACGTAATTGAAATAGATGGGATTCGTATCCTTCTGCCATCACAGTTCCTGGAAAGTCCACCCTCATTGTCTGGGGGTAAGAAGCGTCCAGCAGAAAAACCTTCTACTTCCAGACCACTTGGCCTGTCCAATccttctgaagaagaaattcAGCCGCCCAAAGAGTCTGAACCAGAAGCAACCCCAGTGCCAAGTTTGAACATCCAAACAGATGAAACAATGCCACCTCGAGGAGAGCTATCAGAACAGGAGAGTGTTGGGGGCAGTGACAGCTCTGTATGGGTGCAGGCATTTCGAGAGAAGGAAGTATCAACATCATATGACCTGGCAGCTAGAGAGAGTTGGTTGGCTTCAGATGGCTCAGATGCAGATGTAATTCTGGAGAGTGAGGCCACAGCATCTGTCATCAATAAGCAGGACAAATCTGGGACAAGCAGCCAGGAGAAGAGGAAAGGACAAGCAGATAGGGTTTATAAATGTGGGACATGTGGGGAACCATTCAACTGTCCAAAAGAACGGCGTGTTCATAGGAGCACATATCATTCTGATAAGAGTGCAAACAGTGAAGAAGTGTCAGCAAGTGGGGATAAAGTCAGAATGGACGTAGTGTCAAGAAAACAAGTTCATAAGCGGAAGGCAAGAATTAAGAAAGTGataaaggaagaagaagatgataaGTATTGTGTGAAGACAGAAAAGCCACAATTCATGGAAGTGTTCCTTGAAGAGGATACAGAGACGAAGATGGAGGCTGAAGGTGGATCTGAAGTGGGAGAAGAGCTCTCAGAGAATGTTTCAGCTgcagttgataaaatggaggCTGGAGAGGTGCCAAAACCAGAACCTGCATTAGATGCAGCTGCCGCCTTTCCTTGTAATATGTGTACAGAGGTATTTACATCTTCCAAGCTGCGGAGTGATCATGAAGTTAAGGTACACAAGAAACCCAAAGACAAGAAGAATGTATGTGCCACTTGCAAAGAAGTCTTTACTAAGGATTGTGATTACCAAGCACATCTTCAGACACATCCTCTTGAATGTTCTCagtgtggaaaatatttctatagGCGTCAGAACCTCGATTTACACTTAAAACGTCATCTAGGTATCAAGCCCCACAAATGCACCATATGTGACAAAGcatttgtaacaaaacagaagTTGGCGGAACATACCAACTCTCACACTGGCAATGCTCCTATCAAATGCCCGCTTTGTGATGAGACATTCAGGAGGTATAGCAACCTCATCCAGCATAAGCATCGACATCACATGAATGTCAAGAAGAAGGTGAAGGACTTCATCTGCCACTGTGGTGAGATATTCCACTCAAAGAAGAAGCTGGAGTGGCACAAAGAGATACATGAAGAGAAGCCAAAATGTTGCAGTTATTGCAGTGAGCGCTTTGTTCATGCATCGAGTCTCACAAGACACATTCGCAAAGCACATGATTGCCGTTATGTGCCAAAGTGTGGGCGTGAAGTGGAGAATGTGGAGTGCAAAATGTGTGGATATGTATTCTTGAAAAGTTCACTGCCAGTACACATGCGCATGCACAGTGGAGAGCGTCCTTATTCCTGTCATGTGTGTGGGAAGGACTTTACTACCAAGTGGAACCTGCAGCTGCACCGGTGGACTCATGCAGCACGCAGTTCAAAGCCCTTCAAGTGTTCTTTGTGCAAGAGTGCATTCTTTCGTCGTAATGATTACACAGCGCACATGCATTCGCATCGCAACATCCGGCCATACACTTGCAATCACTGTGGTTGCCAGTTCATCCGCAAGTATAATTGTCTGCGTCACGTGAGGGAGCATGAGGTTGGAAAGTCTTTCAGTTGTAATGTCTGTGGGAAATTGTTTCATCGTAGTTATTACCTGAAGGAACACTTACGTGTGCACAGTGGGTCTCGTCCATTTGCCTGCCACATTTGTGGGAAGGCTTCCAGTACCAAGTCAAACCAcaataaacatgtaaaaattCACCATGCTCGAGAGCCAGTCAATACAGAGGGCTAa
Protein Sequence: MENGLSPVSCPVCTLYMREGVTLQSHLDTHPKDQVIAALVRISAGGSISAIENQSDNETMPVVIPENAPCSQEPLSGPQCFPPSSSHFTTAITYQQFLSSNGSASSTVIPQYVSMPAILSAPSTSHSATNQAAFMQMLYNPYMIQQQQQQFQLLSSVTSPSQPQSFIRHVVPSYPTHHVSQSQMNLSSNSIPLSASYQTSDFPADCAPQGFQNTSNITPSSLTLPASSSNSFPHSTLSCSVSSPVSARGTIPTGYLLPSVGEHAANQIEQGIVNKPRTPPSDQHRNVSILNGIAQYSKQQLEEETAIENVPEENLFPDRNLSSSTGGVSAVYNGVATQTSDMQYEYEDQKSPYISKDEEAAVTLDGVIGMQQELPRSESVNVRVRKDLNDMAVSPMVQSHDSGSEESTENEYSDMRNEDMTQISGIIRNALRIQPPPISVADSDEYITSDRQYSGQDDPSEEEPAVKELSETGEDKCDKPDETNEESGNRFLDLDSSEAVNVIEIDGIRILLPSQFLESPPSLSGGKKRPAEKPSTSRPLGLSNPSEEEIQPPKESEPEATPVPSLNIQTDETMPPRGELSEQESVGGSDSSVWVQAFREKEVSTSYDLAARESWLASDGSDADVILESEATASVINKQDKSGTSSQEKRKGQADRVYKCGTCGEPFNCPKERRVHRSTYHSDKSANSEEVSASGDKVRMDVVSRKQVHKRKARIKKVIKEEEDDKYCVKTEKPQFMEVFLEEDTETKMEAEGGSEVGEELSENVSAAVDKMEAGEVPKPEPALDAAAAFPCNMCTEVFTSSKLRSDHEVKVHKKPKDKKNVCATCKEVFTKDCDYQAHLQTHPLECSQCGKYFYRRQNLDLHLKRHLGIKPHKCTICDKAFVTKQKLAEHTNSHTGNAPIKCPLCDETFRRYSNLIQHKHRHHMNVKKKVKDFICHCGEIFHSKKKLEWHKEIHEEKPKCCSYCSERFVHASSLTRHIRKAHDCRYVPKCGREVENVECKMCGYVFLKSSLPVHMRMHSGERPYSCHVCGKDFTTKWNLQLHRWTHAARSSKPFKCSLCKSAFFRRNDYTAHMHSHRNIRPYTCNHCGCQFIRKYNCLRHVREHEVGKSFSCNVCGKLFHRSYYLKEHLRVHSGSRPFACHICGKASSTKSNHNKHVKIHHAREPVNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -