Znev004042.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- ZFY
- Assembly
- GCA_000696155.1
- Location
- NW:311773-326718[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 3.4 1.2e+02 2.8 2.4 1 23 189 212 189 212 0.93 2 23 0.99 36 4.5 3.2 2 23 221 243 221 243 0.90 3 23 0.26 9.5 6.3 0.5 3 23 252 272 250 272 0.96 4 23 0.0016 0.057 13.3 0.8 1 23 305 327 305 327 0.97 5 23 0.17 6 6.9 0.1 2 23 427 449 426 449 0.94 6 23 0.01 0.37 10.8 1.4 2 23 454 475 453 475 0.95 7 23 0.47 17 5.5 2.9 2 15 494 507 493 516 0.82 8 23 3.6 1.3e+02 2.7 9.3 1 23 525 547 525 547 0.96 9 23 0.016 0.58 10.1 0.2 2 23 555 576 554 576 0.96 10 23 0.0002 0.007 16.2 3.4 2 23 581 602 581 602 0.95 11 23 0.14 5.1 7.2 0.7 1 23 610 632 610 632 0.98 12 23 8e-06 0.00029 20.5 1.5 1 23 638 661 638 661 0.98 13 23 0.0019 0.069 13.0 0.7 1 23 669 692 669 692 0.93 14 23 0.0016 0.059 13.2 0.2 1 23 698 721 698 721 0.95 15 23 2 73 3.5 0.2 1 23 939 962 939 962 0.91 16 23 0.0011 0.038 13.9 6.9 2 23 1127 1148 1126 1148 0.96 17 23 9.4e-06 0.00034 20.3 1.5 3 23 1156 1176 1154 1176 0.98 18 23 0.0011 0.041 13.8 2.2 1 23 1182 1204 1182 1204 0.98 19 23 0.00023 0.0081 16.0 1.1 1 23 1210 1232 1210 1232 0.98 20 23 4.6e-05 0.0016 18.1 0.4 1 23 1238 1261 1238 1261 0.86 21 23 0.00026 0.0095 15.8 2.1 1 23 1270 1292 1270 1292 0.97 22 23 0.00017 0.006 16.4 2.5 1 23 1298 1320 1298 1320 0.97 23 23 0.038 1.4 9.0 0.3 2 19 1328 1345 1327 1350 0.93
Sequence Information
- Coding Sequence
- ATGGCAGCTGTTAAAGGGCTACACAACATGACCGCAAATCCAGGTTCTCACGTTCAATCAGCCGTTTTGCTCACTTGTTTACCAACAAACTTTTTTAACAAGGAATTACCAACTTTAATTTTGAGGTCTCCTCAGGAGACATTAGGTATGCCCAGTTTAATGCAGGCAGAGCAACAGGTGCAACCAAATTTGGGTTATTCAGTAGTTCTTGGAAGTGAGAAGTATGAGTTGTTAGGATCATCTCCACAGGAAGGAAAGAAGATTGAACTAAGAGATGGCAACAAGTGTGGTGATGAGCAAAACACTGACCTTGTGTTGACTACAGGAAACATGCATTCCAAACAAAAGACATGCAGTGCTAGACCAGTGACCCATATTGAAATTATTAGACAGAAGCCCAGTGTGGTAAAAAAGAAGCATGGTGCATCCCGCCGTGTTACCGGTGCAAATCGAGTGGTACCATTGATTACAAGCATGTGGCAGAAACGAGAACTCAAAGGTATTGAACCATCTCTAGCAGCagtgtacaaaacaattctGGATGATCCAGATACTGTTGATGAACACAAATGTGAAGCATGCCACAAGCAATTCTTGTCAGTCACACAGGTAGAAAACCACATTAAGGAGATGCATCCTCAGCAACATGTAGTGCTGGAACAGTGCTTTGTGTGTCGGAAGAAATACGTTTTCCAGTCCCAACTGAAGTGCCACCTGTCAGAAGTTCATAGAATTCAGTACCCAGAAATGAtatgcaaaatatgtttcatggAATTCAACACAGTGATGGAACAGAAAGCACATGAGCGGAAACATGACAAAATCTATTCCTGCCAGCACTGCTGTGCCAAGTTTGCATCAGTGTATCTTTGTCAGAAACACTATGAGAAGCACCTGGTTGATATGAAGCCTTATCAGTGCTTGTCTTGTGGTAAGAGATTCCAGAACAGCATTTCACTGAGTATCCATCGCGTTCGGcacaaacattcaaaatgtttgatTTGTAATGCATTATTTGGAGAAGAACTGGAATTGTTGATGCATGTAAGGGCTCATGGAATCCAGGGCAAGCATCAGTTTTTAGCAGCAGTTGAGCAGTTAGACCAGGAAGAGACACAGCTTGAAGACATGATGAGCGTCTACTTAAAAACAAGCACAGAACATCATCCAACAGGCATGGATAAAGGGGTCAGTGACTGTATGGAAGGTCTGCTATGTGCAGTCTCTCAGGCACTAGATGCTGGTACTCCAGAACCAGTGTCAGGCAAGAGAGGGGTGGAATGCAAGCTGTGTGGACTTGAGGTTCAGTCACCAAGGGAGCTGGTGGAGCATCGGCGTGACAACCATGTGCGTAGCTGCACATGTCTGGTCTGTGGTAAGAGAAGTCGTTCTGTCAGCCAGACATGGCGACACATAGCCACTCATGTTGACAAGGTGAAGTCCAATGAAATGGTGTGTCTCATCAACAAGACTGAACAACAGTGCCACATGTGTCACAAGATGTTCCCATCAAAAGGGAAGAAGAATTTCCATTTGGAACACGTGCACAAGATTGAGACCGTCCAGCGGCCGCACTGCTGTACAGTTTGTTCAAGAAAATTCCAGCATAAGACATCAAGGGACAGACACATGATGCTGCATGGGAAGGACAAGAATGGCCTCAGGTGTGCAGTGTGCAACCAGGTGTTCCTGCGACCGAAGTTCCTGGTGAGGCACATCAAAGAGCATGAGTCCCACAATGAGTGCCAcgtttgtaataaaacattctctAAGCGCAGACAGCTCAAATTGCACCTCAGTGGCCACAATCACAGCATAAAGAAGAAGTTCAAATGCTCACTGTGCTCGGTGACCTGTCAGGGTATGGCAGGCCTGCGGGAACATCTGCGGATCCATACTGGTGAGCGTCCCTACAACTGCAGTCAGTGTGAAAGGAGCTTCAAACGCCTGCAGGCCCTTAAGAAACACGTCAGGACCGTGCACTGTGGCCCCAGTGCAGTGAGTCATGCCTGCACCAGTTGTCCAGTGGTTTTCAATAACCGAGGTAACCTGCTGCGGCATTTCCTGCGCATTCACCGTGGACTGCGCCGCTTCATATGTGGGCTCTGTGGTGCTCGCTATGGGCAGAACCAAGACTTACGGAGGCATCTCAAGGCAAAGCACCAAGTGGACATGCCGGTCATTTCATGTGTGGACAAGAAAGCCATCAGCGAGATTTATGTCCTGCCACCTATCAGTAAGTTCCCTAAGTCACATCCACACGCAGAAAAGATAAACAGACTTGTGGCTGAGGAAAAGAGCAAGCTTGAAGATGTATGTGAGGTGCTGAGTAAGAGAGAATTGGCAACAAAAGAGGTTCCACGAGAGGATCTCCCAGCTCACAGAAAGTCAGATCAGATGAAACATTCAGCTGGCAAAGACAGTATATCTTCTGATGAGGCAAACCAGTTCATAAGTTCACAAGTTGGCAGTAGCACGGATGTAGTCTCTTCCAGAATGATGGATCACAAAGCTGTTAATATGCCCCAGCATCTTGAAAACTATTCGTGCAGTACTACAATAGAAATTGGAGGTGCAGAGATGCAGCAGCAAATACCAGAAATCATAGCTGAGAGTTTTGTTCCATTGGTTGGGGGTTTATCGTCCCAATTCAACAGCATCATGAACATGCAGACATGCAGCCAATGCCACAAAGTGTTGTGTGGAGAGACGCTAAGGAAGGATGGTTCAGACAGTGTAAAGATAATTTGCAAGAATTGCACGGATGACTGTGAAGCTCCAGAAAATGGCTCAACTGACAAGGTAGTAACCGTATATCGGTGCGGTGTCTGTTTCACGGACTTCTTTGAAAGGGATGTTCTGGCCGGACATATGGACGAAAAACACAAGGTGCCTCCTGAACCAACATCAGATACAGTCATGAAAACCTCTGCAGGGTTTTTATCAAACATGCATCCCATTATCACTAATCCTTCTGTGCCAAATGACATGGGGTTGCTCTGCCCGCCAATGAACCTGCTTCTACAAAATGTTGTTCTGCAGCCGAGACCAGCTGTTCAGACATTCAACAGTCAGAACATTCTGGTAAATGCTACCCCCATGCTCACTCTCCAGCCTTCAAATGTGCCAGCACTGCTGACATCTGCACCACAGACTTCTACATTTGTAGCCCCTGCAGAAGTGCTAGTTGACCCAGGAAAAGTCCTGCTACCAACTCCTGTTCCTAAAGTTGCTATACCAAAGCTGAACTCAATGAACAAAGCCAGCGATAATAACAAGATACTCTCGAAGGAGAGTGCAGTGGATAAGACTGAAGTCAAGATCTCAAACATGCAATCACCCGAACCTGCAGAGAAACATCAATTAGGGGCAGATTGCATCTGCAAACAGTGTGGGAAGAAGTTCCATAACAGTACAAGGCTGGAGCGGCATCTGAAGACACACGAGGGGGTTCGACCGTTTGGCTGTGCTGTCTGTGGTAAACTTTTTACGGAGAAACACAACCTCAAGGTACACATGCGCACACACACCGGAGAGCGCCCATACACATGCACAGAATGTGGAAAGCAGCTCAGGTACCAGAAAGATTTTGCAGATCACAAGAAAAAGCATCTTGGTATGAAGCCATTCGAGTGTACCGAGTGTGGCCAGAGATTTCTCCGACAGAGGGAGCTGATGCGGCACAAGATAACTCACACTGGAGAAAAGaaGTACAAGTGCCCCATATGTGACAAGGCTTTCACCCGTTTAGACCAGCTGAAACTTGTGCATATGCGCCAGCACGACACTGCACCGGGACCTTCCCCCTTTGTTTGCTTGACGTGCCATAAGAGTTTCAAAGTTAAGGGCAAGCTGGAACAGCATCAGATCCTACACTCAGgCCAGAAGAACCACCACTGTCCAATCTGTGATAAAACTTTTGCTCTAGACGCATATTTGAAATCTCATCTTAAGACGCACAAGAAGCAAGATGGCTACATCCAATGCGCCAAGTGTCCTCGGAGATTTGCTTCTGAACAGACACTGCAGGTTCATGACGAGAAGTTTCATGCGAGACTACAGAGAATTACAAAGCAGTcgaaagaaggaaacaaaaataagccGAAGAAACTGAGTATACTCCCAGACACAACTCTGCTAGAACCAGAAATAGACATCACAGACATGGAGGAAATGGATGGAATCAACCTGATGGAGGAGGAAGATGTCATCCTTGCTGACGATAACTGCGACACTGTCATCTACCTGCAGATGGTGCCAGGCCTAGACCTGCCTCTTAACAGTGATACCTCAGACTAA
- Protein Sequence
- MAAVKGLHNMTANPGSHVQSAVLLTCLPTNFFNKELPTLILRSPQETLGMPSLMQAEQQVQPNLGYSVVLGSEKYELLGSSPQEGKKIELRDGNKCGDEQNTDLVLTTGNMHSKQKTCSARPVTHIEIIRQKPSVVKKKHGASRRVTGANRVVPLITSMWQKRELKGIEPSLAAVYKTILDDPDTVDEHKCEACHKQFLSVTQVENHIKEMHPQQHVVLEQCFVCRKKYVFQSQLKCHLSEVHRIQYPEMICKICFMEFNTVMEQKAHERKHDKIYSCQHCCAKFASVYLCQKHYEKHLVDMKPYQCLSCGKRFQNSISLSIHRVRHKHSKCLICNALFGEELELLMHVRAHGIQGKHQFLAAVEQLDQEETQLEDMMSVYLKTSTEHHPTGMDKGVSDCMEGLLCAVSQALDAGTPEPVSGKRGVECKLCGLEVQSPRELVEHRRDNHVRSCTCLVCGKRSRSVSQTWRHIATHVDKVKSNEMVCLINKTEQQCHMCHKMFPSKGKKNFHLEHVHKIETVQRPHCCTVCSRKFQHKTSRDRHMMLHGKDKNGLRCAVCNQVFLRPKFLVRHIKEHESHNECHVCNKTFSKRRQLKLHLSGHNHSIKKKFKCSLCSVTCQGMAGLREHLRIHTGERPYNCSQCERSFKRLQALKKHVRTVHCGPSAVSHACTSCPVVFNNRGNLLRHFLRIHRGLRRFICGLCGARYGQNQDLRRHLKAKHQVDMPVISCVDKKAISEIYVLPPISKFPKSHPHAEKINRLVAEEKSKLEDVCEVLSKRELATKEVPREDLPAHRKSDQMKHSAGKDSISSDEANQFISSQVGSSTDVVSSRMMDHKAVNMPQHLENYSCSTTIEIGGAEMQQQIPEIIAESFVPLVGGLSSQFNSIMNMQTCSQCHKVLCGETLRKDGSDSVKIICKNCTDDCEAPENGSTDKVVTVYRCGVCFTDFFERDVLAGHMDEKHKVPPEPTSDTVMKTSAGFLSNMHPIITNPSVPNDMGLLCPPMNLLLQNVVLQPRPAVQTFNSQNILVNATPMLTLQPSNVPALLTSAPQTSTFVAPAEVLVDPGKVLLPTPVPKVAIPKLNSMNKASDNNKILSKESAVDKTEVKISNMQSPEPAEKHQLGADCICKQCGKKFHNSTRLERHLKTHEGVRPFGCAVCGKLFTEKHNLKVHMRTHTGERPYTCTECGKQLRYQKDFADHKKKHLGMKPFECTECGQRFLRQRELMRHKITHTGEKKYKCPICDKAFTRLDQLKLVHMRQHDTAPGPSPFVCLTCHKSFKVKGKLEQHQILHSGQKNHHCPICDKTFALDAYLKSHLKTHKKQDGYIQCAKCPRRFASEQTLQVHDEKFHARLQRITKQSKEGNKNKPKKLSILPDTTLLEPEIDITDMEEMDGINLMEEEDVILADDNCDTVIYLQMVPGLDLPLNSDTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -